RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 G3BP1Q13283 466 aaKnown RBP eCLIP13.07□□□□□ -0.32
SRP54-205ENST00000554803 PKP1Q13835 747 aa13.07□□□□□ -0.32
SRP54-205ENST00000554803 FKBP1CQ5VVH2 108 aa13.07□□□□□ -0.32
SRP54-205ENST00000554803 GPAT2Q6NUI2 795 aa13.07□□□□□ -0.32
SRP54-205ENST00000554803 CHMP4CQ96CF2 233 aa13.07□□□□□ -0.32
SRP54-205ENST00000554803 FAM161BQ96MY7 647 aa13.07□□□□□ -0.32
SRP54-205ENST00000554803 C11orf49Q9H6J7 331 aa13.07□□□□□ -0.32
SRP54-205ENST00000554803 DOCK2Q92608 1830 aa13.06□□□□□ -0.32
SRP54-205ENST00000554803 SYCE3A1L190 88 aa13.06□□□□□ -0.32
SRP54-205ENST00000554803 TNPO2O14787 897 aaKnown RBP13.06□□□□□ -0.32
SRP54-205ENST00000554803 CIAO1O76071 339 aa13.06□□□□□ -0.32
SRP54-205ENST00000554803 ZKSCAN1P17029 563 aaPredicted RBP13.06□□□□□ -0.32
SRP54-205ENST00000554803 TFCP2Q12800 502 aa13.06□□□□□ -0.32
SRP54-205ENST00000554803 TDRD7Q8NHU6 1098 aaKnown RBP13.06□□□□□ -0.32
SRP54-205ENST00000554803 MAFAQ8NHW3 353 aaPredicted RBP13.06□□□□□ -0.32
SRP54-205ENST00000554803 EVI5LQ96CN4 794 aa13.06□□□□□ -0.32
SRP54-205ENST00000554803 LSG1Q9H089 658 aaKnown RBP13.06□□□□□ -0.32
SRP54-205ENST00000554803 DIAPH3Q9NSV4 1193 aa13.06□□□□□ -0.32
SRP54-205ENST00000554803 SMC3Q9UQE7 1217 aa13.06□□□□□ -0.32
SRP54-205ENST00000554803 LTBP2Q14767 1821 aa13.06□□□□□ -0.32
SRP54-205ENST00000554803 CXCL11O14625 94 aa13.05□□□□□ -0.32
SRP54-205ENST00000554803 PLA2G5P39877 138 aa13.05□□□□□ -0.32
SRP54-205ENST00000554803 HDLBPQ00341 1268 aaKnown RBP13.05□□□□□ -0.32
SRP54-205ENST00000554803 ZNF697Q5TEC3 545 aa13.05□□□□□ -0.32
SRP54-205ENST00000554803 RNF20Q5VTR2 975 aa13.05□□□□□ -0.32
SRP54-205ENST00000554803 LDHAL6AQ6ZMR3 332 aa13.05□□□□□ -0.32
SRP54-205ENST00000554803 CDX2Q99626 313 aaPredicted RBP13.05□□□□□ -0.32
SRP54-205ENST00000554803 ECHDC1Q9NTX5 307 aa13.05□□□□□ -0.32
SRP54-205ENST00000554803 ZNF112Q9UJU3 913 aa13.05□□□□□ -0.32
SRP54-205ENST00000554803 PALD1Q9ULE6 856 aa13.05□□□□□ -0.32
SRP54-205ENST00000554803 SNX14Q9Y5W7 946 aa13.05□□□□□ -0.32
SRP54-205ENST00000554803 STX6O43752 255 aa13.04□□□□□ -0.32
SRP54-205ENST00000554803 CAVIN2O95810 425 aa13.04□□□□□ -0.32
SRP54-205ENST00000554803 GRIK5Q16478 980 aa13.04□□□□□ -0.32
SRP54-205ENST00000554803 NOL9Q5SY16 702 aaKnown RBP13.04□□□□□ -0.32
SRP54-205ENST00000554803 SASS6Q6UVJ0 657 aa13.04□□□□□ -0.32
SRP54-205ENST00000554803 PRIMPOLQ96LW4 560 aa13.04□□□□□ -0.32
SRP54-205ENST00000554803 CNNM1Q9NRU3 951 aa13.04□□□□□ -0.32
SRP54-205ENST00000554803 TMOD2Q9NZR1 351 aa13.04□□□□□ -0.32
SRP54-205ENST00000554803 HMG20BQ9P0W2 317 aa13.04□□□□□ -0.32
SRP54-205ENST00000554803 USP25Q9UHP3 1055 aa13.04□□□□□ -0.32
SRP54-205ENST00000554803 RAPGEFL1Q9UHV5 662 aa13.04□□□□□ -0.32
SRP54-205ENST00000554803 TAOK2Q9UL54 1235 aa13.04□□□□□ -0.32
SRP54-205ENST00000554803 CYP46A1Q9Y6A2 500 aa13.04□□□□□ -0.32
SRP54-205ENST00000554803 PFASO15067 1338 aa13.04□□□□□ -0.32
SRP54-205ENST00000554803 ELP1O95163 1332 aa13.04□□□□□ -0.32
SRP54-205ENST00000554803 DOCK1Q14185 1865 aa13.04□□□□□ -0.32
SRP54-205ENST00000554803 HMGCRP04035 888 aa13.03□□□□□ -0.32
SRP54-205ENST00000554803 IL15P40933 162 aaPredicted RBP13.03□□□□□ -0.32
SRP54-205ENST00000554803 MIGA2Q7L4E1 593 aa13.03□□□□□ -0.32
SRP54-205ENST00000554803 VGLL2Q8N8G2 317 aa13.03□□□□□ -0.32
SRP54-205ENST00000554803 TEKT1Q969V4 418 aa13.03□□□□□ -0.32
SRP54-205ENST00000554803 COA7Q96BR5 231 aa13.03□□□□□ -0.32
SRP54-205ENST00000554803 EAF2Q96CJ1 260 aaPredicted RBP13.03□□□□□ -0.32
SRP54-205ENST00000554803 ZSWIM6Q9HCJ5 1215 aa13.03□□□□□ -0.32
SRP54-205ENST00000554803 HMX1Q9NP08 348 aaPredicted RBP13.03□□□□□ -0.32
SRP54-205ENST00000554803 TLR7Q9NYK1 1049 aaKnown RBP13.03□□□□□ -0.32
SRP54-205ENST00000554803 OGDHLQ9ULD0 1010 aa13.03□□□□□ -0.32
SRP54-205ENST00000554803 SLC45A1Q9Y2W3 748 aa13.03□□□□□ -0.32
SRP54-205ENST00000554803 MYO5AQ9Y4I1 1855 aaKnown RBP13.02□□□□□ -0.32
SRP54-205ENST00000554803 GOLGA6L6A8MZA4 724 aa13.02□□□□□ -0.33
SRP54-205ENST00000554803 F13A1P00488 732 aa13.02□□□□□ -0.33
SRP54-205ENST00000554803 PTMAP06454 111 aaKnown RBP13.02□□□□□ -0.33
SRP54-205ENST00000554803 MDM2Q00987 491 aaPredicted RBP13.02□□□□□ -0.33
SRP54-205ENST00000554803 KRT32Q14532 448 aa13.02□□□□□ -0.33
SRP54-205ENST00000554803 METTL24Q5JXM2 366 aa13.02□□□□□ -0.33
SRP54-205ENST00000554803 TSHZ3Q63HK5 1081 aa13.02□□□□□ -0.33
SRP54-205ENST00000554803 FASTKD5Q7L8L6 764 aaKnown RBP13.02□□□□□ -0.33
SRP54-205ENST00000554803 ZDHHC15Q96MV8 337 aa13.02□□□□□ -0.33
SRP54-205ENST00000554803 FBXO3Q9UK99 471 aa13.02□□□□□ -0.33
SRP54-205ENST00000554803 MYO9BQ13459 2157 aa13.02□□□□□ -0.33
SRP54-205ENST00000554803 PIEZO1Q92508 2521 aa13.01□□□□□ -0.33
SRP54-205ENST00000554803 A0A0G2JLL6 359 aaPredicted RBP13.01□□□□□ -0.33
SRP54-205ENST00000554803 TNFRSF10AO00220 468 aa13.01□□□□□ -0.33
SRP54-205ENST00000554803 IFIT2P09913 472 aaKnown RBP13.01□□□□□ -0.33
SRP54-205ENST00000554803 HIBADHP31937 336 aaKnown RBP13.01□□□□□ -0.33
SRP54-205ENST00000554803 GYG1P46976 350 aa13.01□□□□□ -0.33
SRP54-205ENST00000554803 TSGA10IPQ3SY00 556 aa13.01□□□□□ -0.33
SRP54-205ENST00000554803 TNNI3KQ59H18 835 aa13.01□□□□□ -0.33
SRP54-205ENST00000554803 PRRT2Q7Z6L0 340 aaPredicted RBP13.01□□□□□ -0.33
SRP54-205ENST00000554803 AACSQ86V21 672 aa13.01□□□□□ -0.33
SRP54-205ENST00000554803 FAM122AQ96E09 287 aa13.01□□□□□ -0.33
SRP54-205ENST00000554803 FAM84BQ96KN1 310 aaPredicted RBP13.01□□□□□ -0.33
SRP54-205ENST00000554803 MRIQ9BWK5 157 aa13.01□□□□□ -0.33
SRP54-205ENST00000554803 CCDC8Q9H0W5 538 aaPredicted RBP13.01□□□□□ -0.33
SRP54-205ENST00000554803 CEP126Q9P2H0 1117 aa13.01□□□□□ -0.33
SRP54-205ENST00000554803 FPGT-TNNI3KV9GXZ4 949 aa13.01□□□□□ -0.33
SRP54-205ENST00000554803 LOC285556D6RIA3 1793 aa13.01□□□□□ -0.33
SRP54-205ENST00000554803 MROH5Q6ZUA9 1318 aa13□□□□□ -0.33
SRP54-205ENST00000554803 COL6A1P12109 1028 aa13□□□□□ -0.33
SRP54-205ENST00000554803 HOXD11P31277 338 aaPredicted RBP13□□□□□ -0.33
SRP54-205ENST00000554803 AK2P54819 239 aa13□□□□□ -0.33
SRP54-205ENST00000554803 TIMM10P62072 90 aa13□□□□□ -0.33
SRP54-205ENST00000554803 UBE4AQ14139 1066 aa13□□□□□ -0.33
SRP54-205ENST00000554803 APOBEC3HQ6NTF7 200 aaKnown RBP13□□□□□ -0.33
SRP54-205ENST00000554803 TBC1D22AQ8WUA7 517 aa13□□□□□ -0.33
SRP54-205ENST00000554803 FAM151AQ8WW52 585 aa13□□□□□ -0.33
SRP54-205ENST00000554803 UPF3BQ9BZI7 483 aaKnown RBP13□□□□□ -0.33
SRP54-205ENST00000554803 SEMA6BQ9H3T3 888 aa13□□□□□ -0.33
SRP54-205ENST00000554803 PDRG1Q9NUG6 133 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms