RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 CREBRFQ8IUR6 639 aa17.9■□□□□ 0.46
ARHGEF40-203ENST00000554514 BSDC1Q9NW68 430 aaPredicted RBP17.9■□□□□ 0.46
ARHGEF40-203ENST00000554514 MYH6P13533 1939 aa17.89■□□□□ 0.46
ARHGEF40-203ENST00000554514 COL16A1Q07092 1604 aaPredicted RBP17.89■□□□□ 0.46
ARHGEF40-203ENST00000554514 URI1O94763 535 aaPredicted RBP17.89■□□□□ 0.46
ARHGEF40-203ENST00000554514 PRDX5P30044 214 aa17.89■□□□□ 0.46
ARHGEF40-203ENST00000554514 MLKLQ8NB16 471 aa17.89■□□□□ 0.46
ARHGEF40-203ENST00000554514 CPLX3Q8WVH0 158 aa17.89■□□□□ 0.46
ARHGEF40-203ENST00000554514 PHF20Q9BVI0 1012 aa17.89■□□□□ 0.46
ARHGEF40-203ENST00000554514 SRP68Q9UHB9 627 aaKnown RBP17.89■□□□□ 0.46
ARHGEF40-203ENST00000554514 DACH1Q9UI36 760 aa17.89■□□□□ 0.46
ARHGEF40-203ENST00000554514 ANAPC4Q9UJX5 808 aa17.89■□□□□ 0.46
ARHGEF40-203ENST00000554514 ZHX1Q9UKY1 873 aaPredicted RBP17.89■□□□□ 0.46
ARHGEF40-203ENST00000554514 BCL9LQ86UU0 1499 aa17.89■□□□□ 0.45
ARHGEF40-203ENST00000554514 VEGFAP15692 232 aaPredicted RBP17.89■□□□□ 0.45
ARHGEF40-203ENST00000554514 ZSCAN20P17040 1043 aaPredicted RBP17.89■□□□□ 0.45
ARHGEF40-203ENST00000554514 ETF1P62495 437 aaKnown RBP17.88■□□□□ 0.45
ARHGEF40-203ENST00000554514 TROAPQ12815 778 aa17.88■□□□□ 0.45
ARHGEF40-203ENST00000554514 SLC51AQ86UW1 340 aa17.88■□□□□ 0.45
ARHGEF40-203ENST00000554514 ZNF397Q8NF99 534 aaPredicted RBP17.88■□□□□ 0.45
ARHGEF40-203ENST00000554514 BAG1Q99933 345 aaPredicted RBP17.88■□□□□ 0.45
ARHGEF40-203ENST00000554514 DESI2Q9BSY9 194 aa17.88■□□□□ 0.45
ARHGEF40-203ENST00000554514 BRMS1Q9HCU9 246 aa17.88■□□□□ 0.45
ARHGEF40-203ENST00000554514 SARSP49591 514 aaKnown RBP17.88■□□□□ 0.45
ARHGEF40-203ENST00000554514 FUT2Q10981 343 aa17.88■□□□□ 0.45
ARHGEF40-203ENST00000554514 PIK3AP1Q6ZUJ8 805 aa17.88■□□□□ 0.45
ARHGEF40-203ENST00000554514 PTF1AQ7RTS3 328 aa17.88■□□□□ 0.45
ARHGEF40-203ENST00000554514 SRBD1Q8N5C6 995 aaKnown RBP17.88■□□□□ 0.45
ARHGEF40-203ENST00000554514 ZNF579Q8NAF0 562 aaKnown RBP17.88■□□□□ 0.45
ARHGEF40-203ENST00000554514 CDCA7Q9BWT1 371 aaPredicted RBP17.88■□□□□ 0.45
ARHGEF40-203ENST00000554514 BLZF1Q9H2G9 400 aa17.88■□□□□ 0.45
ARHGEF40-203ENST00000554514 ADAMTS3O15072 1205 aa17.88■□□□□ 0.45
ARHGEF40-203ENST00000554514 PRPF3O43395 683 aaKnown RBP17.88■□□□□ 0.45
ARHGEF40-203ENST00000554514 TOGARAM2Q6ZUX3 1019 aa17.88■□□□□ 0.45
ARHGEF40-203ENST00000554514 CTCFLQ8NI51 663 aaPredicted RBP17.88■□□□□ 0.45
ARHGEF40-203ENST00000554514 CD44P16070 742 aaKnown RBP17.87■□□□□ 0.45
ARHGEF40-203ENST00000554514 MCM7P33993 719 aa17.87■□□□□ 0.45
ARHGEF40-203ENST00000554514 NLRP5P59047 1200 aa17.87■□□□□ 0.45
ARHGEF40-203ENST00000554514 FAM98CQ17RN3 349 aaKnown RBP17.87■□□□□ 0.45
ARHGEF40-203ENST00000554514 TTC38Q5R3I4 469 aa17.87■□□□□ 0.45
ARHGEF40-203ENST00000554514 SPECC1LQ69YQ0 1117 aa17.87■□□□□ 0.45
ARHGEF40-203ENST00000554514 ENOX1Q8TC92 643 aaKnown RBP17.87■□□□□ 0.45
ARHGEF40-203ENST00000554514 NSUN4Q96CB9 384 aaKnown RBP17.87■□□□□ 0.45
ARHGEF40-203ENST00000554514 BRIP1Q9BX63 1249 aa17.87■□□□□ 0.45
ARHGEF40-203ENST00000554514 OGFRQ9NZT2 677 aa17.87■□□□□ 0.45
ARHGEF40-203ENST00000554514 PPP2R2CQ9Y2T4 447 aa17.87■□□□□ 0.45
ARHGEF40-203ENST00000554514 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.87■□□□□ 0.45
ARHGEF40-203ENST00000554514 TEX33O43247 280 aa17.87■□□□□ 0.45
ARHGEF40-203ENST00000554514 PLCD1P51178 756 aa17.87■□□□□ 0.45
ARHGEF40-203ENST00000554514 PTGDRQ13258 359 aa17.87■□□□□ 0.45
ARHGEF40-203ENST00000554514 DHX8Q14562 1220 aaKnown RBP17.87■□□□□ 0.45
ARHGEF40-203ENST00000554514 KANK3Q6NY19 840 aa17.87■□□□□ 0.45
ARHGEF40-203ENST00000554514 REXO1L1PQ8IX06 675 aa17.87■□□□□ 0.45
ARHGEF40-203ENST00000554514 PAGE5Q96GU1 130 aa17.87■□□□□ 0.45
ARHGEF40-203ENST00000554514 FEZ1Q99689 392 aa17.87■□□□□ 0.45
ARHGEF40-203ENST00000554514 MTA3Q9BTC8 594 aa17.87■□□□□ 0.45
ARHGEF40-203ENST00000554514 ROBO1Q9Y6N7 1651 aa17.86■□□□□ 0.45
ARHGEF40-203ENST00000554514 TSPY2A6NKD2 308 aa17.86■□□□□ 0.45
ARHGEF40-203ENST00000554514 FANCGO15287 622 aa17.86■□□□□ 0.45
ARHGEF40-203ENST00000554514 NT5DC1Q5TFE4 455 aa17.86■□□□□ 0.45
ARHGEF40-203ENST00000554514 TMTC3Q6ZXV5 915 aa17.86■□□□□ 0.45
ARHGEF40-203ENST00000554514 PLCH1Q4KWH8 1693 aa17.86■□□□□ 0.45
ARHGEF40-203ENST00000554514 CCP110O43303 1012 aa17.86■□□□□ 0.45
ARHGEF40-203ENST00000554514 ZNF18P17022 549 aa17.86■□□□□ 0.45
ARHGEF40-203ENST00000554514 RCAN1P53805 252 aa17.86■□□□□ 0.45
ARHGEF40-203ENST00000554514 KARSQ15046 597 aaKnown RBP17.86■□□□□ 0.45
ARHGEF40-203ENST00000554514 TMEM139Q8IV31 216 aa17.86■□□□□ 0.45
ARHGEF40-203ENST00000554514 DCP1AQ9NPI6 582 aaPredicted RBP17.86■□□□□ 0.45
ARHGEF40-203ENST00000554514 RBM28Q9NW13 759 aaKnown RBP17.86■□□□□ 0.45
ARHGEF40-203ENST00000554514 CDC25AP30304 524 aa17.85■□□□□ 0.45
ARHGEF40-203ENST00000554514 KCNJ6P48051 423 aa17.85■□□□□ 0.45
ARHGEF40-203ENST00000554514 RPS8P62241 208 aaKnown RBP17.85■□□□□ 0.45
ARHGEF40-203ENST00000554514 SF3B3Q15393 1217 aaKnown RBP17.85■□□□□ 0.45
ARHGEF40-203ENST00000554514 TRIM65Q6PJ69 517 aa17.85■□□□□ 0.45
ARHGEF40-203ENST00000554514 TXNRD3Q86VQ6 643 aa17.85■□□□□ 0.45
ARHGEF40-203ENST00000554514 NBPF5PQ86XG9 351 aaPredicted RBP17.85■□□□□ 0.45
ARHGEF40-203ENST00000554514 TC2NQ8N9U0 490 aa17.85■□□□□ 0.45
ARHGEF40-203ENST00000554514 CRNKL1Q9BZJ0 848 aaKnown RBP17.85■□□□□ 0.45
ARHGEF40-203ENST00000554514 L2HGDHQ9H9P8 463 aa17.85■□□□□ 0.45
ARHGEF40-203ENST00000554514 ARHGAP6O43182 974 aa17.85■□□□□ 0.45
ARHGEF40-203ENST00000554514 HIBADHP31937 336 aaKnown RBP17.85■□□□□ 0.45
ARHGEF40-203ENST00000554514 MTF1Q14872 753 aa17.85■□□□□ 0.45
ARHGEF40-203ENST00000554514 MCM9Q9NXL9 1143 aa17.85■□□□□ 0.45
ARHGEF40-203ENST00000554514 DDX41Q9UJV9 622 aaKnown RBP17.85■□□□□ 0.45
ARHGEF40-203ENST00000554514 DUOX1Q9NRD9 1551 aa17.85■□□□□ 0.45
ARHGEF40-203ENST00000554514 CNTNAP5Q8WYK1 1306 aa17.85■□□□□ 0.45
ARHGEF40-203ENST00000554514 SYNRGQ9UMZ2 1314 aa17.85■□□□□ 0.45
ARHGEF40-203ENST00000554514 ZSCAN12O43309 604 aa17.85■□□□□ 0.45
ARHGEF40-203ENST00000554514 USP17L8P0C7I0 530 aa17.85■□□□□ 0.45
ARHGEF40-203ENST00000554514 GNG11P61952 73 aa17.85■□□□□ 0.45
ARHGEF40-203ENST00000554514 ARHGAP29Q52LW3 1261 aa17.85■□□□□ 0.45
ARHGEF40-203ENST00000554514 MNS1Q8NEH6 495 aa17.85■□□□□ 0.45
ARHGEF40-203ENST00000554514 GPKOWQ92917 476 aaPredicted RBP eCLIP17.85■□□□□ 0.45
ARHGEF40-203ENST00000554514 SMARCC1Q92922 1105 aaPredicted RBP17.85■□□□□ 0.45
ARHGEF40-203ENST00000554514 CACNA1SQ13698 1873 aa17.84■□□□□ 0.45
ARHGEF40-203ENST00000554514 SLFN14P0C7P3 912 aa17.84■□□□□ 0.45
ARHGEF40-203ENST00000554514 CLEC4GQ6UXB4 293 aa17.84■□□□□ 0.45
ARHGEF40-203ENST00000554514 RASGRP4Q8TDF6 673 aa17.84■□□□□ 0.45
ARHGEF40-203ENST00000554514 CCDC34Q96HJ3 373 aa17.84■□□□□ 0.45
ARHGEF40-203ENST00000554514 MYH13Q9UKX3 1938 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms