RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 TM4SF4P48230 202 aa3.24□□□□□ -1.89
PRPF39-206ENST00000554429 NAP1L1P55209 391 aaKnown RBP3.24□□□□□ -1.89
PRPF39-206ENST00000554429 FMR1Q06787 632 aaKnown RBP eCLIP3.24□□□□□ -1.89
PRPF39-206ENST00000554429 FAM161AQ3B820 660 aa3.24□□□□□ -1.89
PRPF39-206ENST00000554429 EAPPQ56P03 285 aaPredicted RBP3.24□□□□□ -1.89
PRPF39-206ENST00000554429 ODR4Q5SWX8 454 aa3.24□□□□□ -1.89
PRPF39-206ENST00000554429 HDGFL1Q5TGJ6 251 aa3.24□□□□□ -1.89
PRPF39-206ENST00000554429 CCDC70Q6NSX1 233 aa3.24□□□□□ -1.89
PRPF39-206ENST00000554429 RGMBQ6NW40 437 aa3.24□□□□□ -1.89
PRPF39-206ENST00000554429 BLOC1S3Q6QNY0 202 aa3.24□□□□□ -1.89
PRPF39-206ENST00000554429 TTLL7Q6ZT98 887 aa3.24□□□□□ -1.89
PRPF39-206ENST00000554429 KRTAP19-1Q8IUB9 90 aa3.24□□□□□ -1.89
PRPF39-206ENST00000554429 SUGP1Q8IWZ8 645 aaKnown RBP3.24□□□□□ -1.89
PRPF39-206ENST00000554429 BANK1Q8NDB2 785 aa3.24□□□□□ -1.89
PRPF39-206ENST00000554429 CHMP4CQ96CF2 233 aa3.24□□□□□ -1.89
PRPF39-206ENST00000554429 NAP1L4Q99733 375 aaKnown RBP3.24□□□□□ -1.89
PRPF39-206ENST00000554429 AS3MTQ9HBK9 375 aa3.24□□□□□ -1.89
PRPF39-206ENST00000554429 HDAC9Q9UKV0 1011 aa3.24□□□□□ -1.89
PRPF39-206ENST00000554429 PNMA3Q9UL41 463 aa3.24□□□□□ -1.89
PRPF39-206ENST00000554429 ABT1Q9ULW3 272 aaKnown RBP3.24□□□□□ -1.89
PRPF39-206ENST00000554429 GNEQ9Y223 722 aaKnown RBP3.24□□□□□ -1.89
PRPF39-206ENST00000554429 SCINQ9Y6U3 715 aa3.24□□□□□ -1.89
PRPF39-206ENST00000554429 SH3TC1Q8TE82 1336 aa3.24□□□□□ -1.89
PRPF39-206ENST00000554429 UTRNP46939 3433 aa3.24□□□□□ -1.89
PRPF39-206ENST00000554429 CEP350Q5VT06 3117 aa3.24□□□□□ -1.89
PRPF39-206ENST00000554429 CAPN2P17655 700 aa3.24□□□□□ -1.89
PRPF39-206ENST00000554429 DNAJA1P31689 397 aaKnown RBP3.24□□□□□ -1.89
PRPF39-206ENST00000554429 FLT3P36888 993 aa3.24□□□□□ -1.89
PRPF39-206ENST00000554429 RAD51AP2Q09MP3 1159 aa3.24□□□□□ -1.89
PRPF39-206ENST00000554429 CBLBQ13191 982 aa3.24□□□□□ -1.89
PRPF39-206ENST00000554429 PRPF38BQ5VTL8 546 aaKnown RBP3.24□□□□□ -1.89
PRPF39-206ENST00000554429 CYP4F22Q6NT55 531 aa3.24□□□□□ -1.89
PRPF39-206ENST00000554429 OLFM4Q6UX06 510 aa3.24□□□□□ -1.89
PRPF39-206ENST00000554429 C15orf52Q6ZUT6 534 aaKnown RBP3.24□□□□□ -1.89
PRPF39-206ENST00000554429 ZSCAN30Q86W11 494 aa3.24□□□□□ -1.89
PRPF39-206ENST00000554429 PLBD2Q8NHP8 589 aa3.24□□□□□ -1.89
PRPF39-206ENST00000554429 ZBED3Q96IU2 234 aaPredicted RBP3.24□□□□□ -1.89
PRPF39-206ENST00000554429 EYA3Q99504 573 aa3.24□□□□□ -1.89
PRPF39-206ENST00000554429 BEGAINQ9BUH8 593 aa3.24□□□□□ -1.89
PRPF39-206ENST00000554429 INTUQ9ULD6 942 aa3.24□□□□□ -1.89
PRPF39-206ENST00000554429 GJA3Q9Y6H8 435 aa3.24□□□□□ -1.89
PRPF39-206ENST00000554429 PRSS47A8MTI9 375 aa3.24□□□□□ -1.89
PRPF39-206ENST00000554429 CELF2O95319 508 aaKnown RBP3.24□□□□□ -1.89
PRPF39-206ENST00000554429 ZNF853P0CG23 659 aa3.24□□□□□ -1.89
PRPF39-206ENST00000554429 VDRP11473 427 aa3.24□□□□□ -1.89
PRPF39-206ENST00000554429 FKBP1AP62942 108 aaKnown RBP3.24□□□□□ -1.89
PRPF39-206ENST00000554429 PSMD2Q13200 908 aa3.24□□□□□ -1.89
PRPF39-206ENST00000554429 UBE4AQ14139 1066 aa3.24□□□□□ -1.89
PRPF39-206ENST00000554429 ZKSCAN8Q15776 578 aaPredicted RBP3.24□□□□□ -1.89
PRPF39-206ENST00000554429 MAP3K11Q16584 847 aa3.24□□□□□ -1.89
PRPF39-206ENST00000554429 AOC3Q16853 763 aa3.24□□□□□ -1.89
PRPF39-206ENST00000554429 LMBRD2Q68DH5 695 aaPredicted RBP3.24□□□□□ -1.89
PRPF39-206ENST00000554429 DPP8Q6V1X1 898 aaPredicted RBP3.24□□□□□ -1.89
PRPF39-206ENST00000554429 CTU1Q7Z7A3 348 aaKnown RBP3.24□□□□□ -1.89
PRPF39-206ENST00000554429 RASAL3Q86YV0 1011 aa3.24□□□□□ -1.89
PRPF39-206ENST00000554429 CCDC24Q8N4L8 307 aa3.24□□□□□ -1.89
PRPF39-206ENST00000554429 TSC1Q92574 1164 aa3.24□□□□□ -1.89
PRPF39-206ENST00000554429 CDCA7LQ96GN5 454 aa3.24□□□□□ -1.89
PRPF39-206ENST00000554429 IER2Q9BTL4 223 aa3.24□□□□□ -1.89
PRPF39-206ENST00000554429 ALDH8A1Q9H2A2 487 aaPredicted RBP3.24□□□□□ -1.89
PRPF39-206ENST00000554429 PPCSQ9HAB8 311 aa3.24□□□□□ -1.89
PRPF39-206ENST00000554429 CNOT7Q9UIV1 285 aaKnown RBP3.24□□□□□ -1.89
PRPF39-206ENST00000554429 SYNPO2Q9UMS6 1093 aa3.24□□□□□ -1.89
PRPF39-206ENST00000554429 SMC3Q9UQE7 1217 aa3.24□□□□□ -1.89
PRPF39-206ENST00000554429 MED23Q9ULK4 1368 aa3.23□□□□□ -1.89
PRPF39-206ENST00000554429 H7C1D1 291 aa3.23□□□□□ -1.89
PRPF39-206ENST00000554429 TRAF5O00463 557 aa3.23□□□□□ -1.89
PRPF39-206ENST00000554429 GPR37O15354 613 aa3.23□□□□□ -1.89
PRPF39-206ENST00000554429 TIMM44O43615 452 aa3.23□□□□□ -1.89
PRPF39-206ENST00000554429 AOC2O75106 756 aa3.23□□□□□ -1.89
PRPF39-206ENST00000554429 ATG7O95352 703 aa3.23□□□□□ -1.89
PRPF39-206ENST00000554429 ATP2B1P20020 1258 aa3.23□□□□□ -1.89
PRPF39-206ENST00000554429 FECHP22830 423 aa3.23□□□□□ -1.89
PRPF39-206ENST00000554429 CCDC92Q53HC0 331 aaPredicted RBP3.23□□□□□ -1.89
PRPF39-206ENST00000554429 RNF187Q5TA31 235 aaPredicted RBP3.23□□□□□ -1.89
PRPF39-206ENST00000554429 PHLDB3Q6NSJ2 640 aa3.23□□□□□ -1.89
PRPF39-206ENST00000554429 ALYREFQ86V81 257 aaKnown RBP3.23□□□□□ -1.89
PRPF39-206ENST00000554429 NUTM1Q86Y26 1132 aa3.23□□□□□ -1.89
PRPF39-206ENST00000554429 DRC7Q8IY82 874 aa3.23□□□□□ -1.89
PRPF39-206ENST00000554429 MTMR14Q8NCE2 650 aa3.23□□□□□ -1.89
PRPF39-206ENST00000554429 TRPM4Q8TD43 1214 aa3.23□□□□□ -1.89
PRPF39-206ENST00000554429 GCC1Q96CN9 775 aa3.23□□□□□ -1.89
PRPF39-206ENST00000554429 CAPN10Q9HC96 672 aa3.23□□□□□ -1.89
PRPF39-206ENST00000554429 GBA2Q9HCG7 927 aaPredicted RBP3.23□□□□□ -1.89
PRPF39-206ENST00000554429 RNF186Q9NXI6 227 aa3.23□□□□□ -1.89
PRPF39-206ENST00000554429 BIN2Q9UBW5 565 aaPredicted RBP3.23□□□□□ -1.89
PRPF39-206ENST00000554429 SLC45A1Q9Y2W3 748 aa3.23□□□□□ -1.89
PRPF39-206ENST00000554429 MYO3BQ8WXR4 1341 aa3.23□□□□□ -1.89
PRPF39-206ENST00000554429 IRS2Q9Y4H2 1338 aa3.23□□□□□ -1.89
PRPF39-206ENST00000554429 SPDYE5A6NIY4 337 aa3.23□□□□□ -1.89
PRPF39-206ENST00000554429 NPHP1O15259 732 aa3.23□□□□□ -1.89
PRPF39-206ENST00000554429 FOSP01100 380 aaPredicted RBP3.23□□□□□ -1.89
PRPF39-206ENST00000554429 ALDH1L2Q3SY69 923 aa3.23□□□□□ -1.89
PRPF39-206ENST00000554429 DNTTIP2Q5QJE6 756 aaKnown RBP3.23□□□□□ -1.89
PRPF39-206ENST00000554429 L1TD1Q5T7N2 865 aaKnown RBP3.23□□□□□ -1.89
PRPF39-206ENST00000554429 LARP1BQ659C4 914 aaKnown RBP3.23□□□□□ -1.89
PRPF39-206ENST00000554429 C2orf69Q8N8R5 385 aa3.23□□□□□ -1.89
PRPF39-206ENST00000554429 CCDC47Q96A33 483 aaKnown RBP3.23□□□□□ -1.89
PRPF39-206ENST00000554429 TINF2Q9BSI4 451 aa3.23□□□□□ -1.89
PRPF39-206ENST00000554429 PLA2G12BQ9BX93 195 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms