RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 SUGP1Q8IWZ8 645 aaKnown RBP19.18■□□□□ 0.66
PPP4R3A-202ENST00000554390 IFNL3Q8IZI9 196 aa19.18■□□□□ 0.66
PPP4R3A-202ENST00000554390 STRBPQ96SI9 672 aaKnown RBP19.18■□□□□ 0.66
PPP4R3A-202ENST00000554390 CTAGE15A4D2H0 777 aa19.17■□□□□ 0.66
PPP4R3A-202ENST00000554390 IRS4O14654 1257 aaPredicted RBP19.17■□□□□ 0.66
PPP4R3A-202ENST00000554390 RNF40O75150 1001 aa19.17■□□□□ 0.66
PPP4R3A-202ENST00000554390 PPP6R2O75170 966 aa19.17■□□□□ 0.66
PPP4R3A-202ENST00000554390 CTAGE8P0CG41 777 aa19.17■□□□□ 0.66
PPP4R3A-202ENST00000554390 TDO2P48775 406 aa19.17■□□□□ 0.66
PPP4R3A-202ENST00000554390 CTAGE6Q86UF2 777 aa19.17■□□□□ 0.66
PPP4R3A-202ENST00000554390 GPIHBP1Q8IV16 184 aa19.17■□□□□ 0.66
PPP4R3A-202ENST00000554390 CTAGE4Q8IX94 777 aa19.17■□□□□ 0.66
PPP4R3A-202ENST00000554390 SLC35F6Q8N357 371 aa19.17■□□□□ 0.66
PPP4R3A-202ENST00000554390 LCORLQ8N3X6 602 aa19.17■□□□□ 0.66
PPP4R3A-202ENST00000554390 HINFPQ9BQA5 517 aa19.17■□□□□ 0.66
PPP4R3A-202ENST00000554390 ACBD3Q9H3P7 528 aa19.17■□□□□ 0.66
PPP4R3A-202ENST00000554390 CD44P16070 742 aaKnown RBP19.17■□□□□ 0.66
PPP4R3A-202ENST00000554390 TUBB4BP68371 445 aa19.17■□□□□ 0.66
PPP4R3A-202ENST00000554390 KIF6Q6ZMV9 814 aa19.17■□□□□ 0.66
PPP4R3A-202ENST00000554390 MMS22LQ6ZRQ5 1243 aa19.17■□□□□ 0.66
PPP4R3A-202ENST00000554390 MICALL1Q8N3F8 863 aa19.17■□□□□ 0.66
PPP4R3A-202ENST00000554390 SHISA4Q96DD7 197 aa19.17■□□□□ 0.66
PPP4R3A-202ENST00000554390 TFR2Q9UP52 801 aa19.17■□□□□ 0.66
PPP4R3A-202ENST00000554390 AFAP1L1Q8TED9 768 aa19.17■□□□□ 0.66
PPP4R3A-202ENST00000554390 PANX2Q96RD6 677 aa19.17■□□□□ 0.66
PPP4R3A-202ENST00000554390 BLZF1Q9H2G9 400 aa19.17■□□□□ 0.66
PPP4R3A-202ENST00000554390 GLI3P10071 1580 aa19.16■□□□□ 0.66
PPP4R3A-202ENST00000554390 MDM2Q00987 491 aaPredicted RBP19.16■□□□□ 0.66
PPP4R3A-202ENST00000554390 TJP1Q07157 1748 aa19.16■□□□□ 0.66
PPP4R3A-202ENST00000554390 TUBB2AQ13885 445 aa19.16■□□□□ 0.66
PPP4R3A-202ENST00000554390 RASGRF1Q13972 1273 aa19.16■□□□□ 0.66
PPP4R3A-202ENST00000554390 NR1I3Q14994 352 aa19.16■□□□□ 0.66
PPP4R3A-202ENST00000554390 RIC1Q4ADV7 1423 aa19.16■□□□□ 0.66
PPP4R3A-202ENST00000554390 NOA1Q8NC60 698 aaKnown RBP19.16■□□□□ 0.66
PPP4R3A-202ENST00000554390 TUBB2BQ9BVA1 445 aa19.16■□□□□ 0.66
PPP4R3A-202ENST00000554390 LMTK3Q96Q04 1460 aa19.16■□□□□ 0.66
PPP4R3A-202ENST00000554390 A0A087WUV0 522 aaPredicted RBP19.16■□□□□ 0.66
PPP4R3A-202ENST00000554390 FAM237AA0A1B0GTK4 181 aa19.16■□□□□ 0.66
PPP4R3A-202ENST00000554390 BCAMP50895 628 aa19.16■□□□□ 0.66
PPP4R3A-202ENST00000554390 CDC5LQ99459 802 aaKnown RBP19.16■□□□□ 0.66
PPP4R3A-202ENST00000554390 TMOD3Q9NYL9 352 aa19.16■□□□□ 0.66
PPP4R3A-202ENST00000554390 SYF2O95926 243 aaKnown RBP19.15■□□□□ 0.66
PPP4R3A-202ENST00000554390 FBXL16Q8N461 479 aa19.15■□□□□ 0.66
PPP4R3A-202ENST00000554390 SECISBP2LQ93073 1101 aaKnown RBP19.15■□□□□ 0.66
PPP4R3A-202ENST00000554390 ABCF2Q9UG63 623 aa19.15■□□□□ 0.66
PPP4R3A-202ENST00000554390 FBXO2Q9UK22 296 aaPredicted RBP19.15■□□□□ 0.66
PPP4R3A-202ENST00000554390 CDKL5O76039 1030 aa19.15■□□□□ 0.66
PPP4R3A-202ENST00000554390 RBL2Q08999 1139 aa19.15■□□□□ 0.66
PPP4R3A-202ENST00000554390 MCTP2Q6DN12 878 aa19.15■□□□□ 0.66
PPP4R3A-202ENST00000554390 ZBTB38Q8NAP3 1195 aaPredicted RBP19.15■□□□□ 0.66
PPP4R3A-202ENST00000554390 ACRBPQ8NEB7 543 aa19.15■□□□□ 0.66
PPP4R3A-202ENST00000554390 ENOX1Q8TC92 643 aaKnown RBP19.15■□□□□ 0.66
PPP4R3A-202ENST00000554390 TMEM94Q12767 1356 aa19.15■□□□□ 0.66
PPP4R3A-202ENST00000554390 ANKRD18BA2A2Z9 1011 aa19.14■□□□□ 0.66
PPP4R3A-202ENST00000554390 PIGBQ92521 554 aa19.14■□□□□ 0.66
PPP4R3A-202ENST00000554390 ZBTB1Q9Y2K1 713 aa19.14■□□□□ 0.66
PPP4R3A-202ENST00000554390 RTN1Q16799 776 aa19.14■□□□□ 0.65
PPP4R3A-202ENST00000554390 NLRP10Q86W26 655 aa19.14■□□□□ 0.65
PPP4R3A-202ENST00000554390 NUTM2AQ8IVF1 878 aaPredicted RBP19.14■□□□□ 0.65
PPP4R3A-202ENST00000554390 SLC4A4Q9Y6R1 1079 aa19.14■□□□□ 0.65
PPP4R3A-202ENST00000554390 PDE8BO95263 885 aa19.14■□□□□ 0.65
PPP4R3A-202ENST00000554390 MMP1P03956 469 aa19.14■□□□□ 0.65
PPP4R3A-202ENST00000554390 PIP4K2BP78356 416 aa19.14■□□□□ 0.65
PPP4R3A-202ENST00000554390 MTMR7Q9Y216 660 aa19.14■□□□□ 0.65
PPP4R3A-202ENST00000554390 PCDH11XQ9BZA7 1347 aa19.14■□□□□ 0.65
PPP4R3A-202ENST00000554390 PCDH11YQ9BZA8 1340 aa19.14■□□□□ 0.65
PPP4R3A-202ENST00000554390 ADAMTS3O15072 1205 aa19.13■□□□□ 0.65
PPP4R3A-202ENST00000554390 PCCAP05165 728 aaPredicted RBP19.13■□□□□ 0.65
PPP4R3A-202ENST00000554390 MMP14P50281 582 aa19.13■□□□□ 0.65
PPP4R3A-202ENST00000554390 ZNF174Q15697 407 aa19.13■□□□□ 0.65
PPP4R3A-202ENST00000554390 SWT1Q5T5J6 900 aaKnown RBP19.13■□□□□ 0.65
PPP4R3A-202ENST00000554390 MFSD6Q6ZSS7 791 aa19.13■□□□□ 0.65
PPP4R3A-202ENST00000554390 RASGRP2Q7LDG7 609 aa19.13■□□□□ 0.65
PPP4R3A-202ENST00000554390 PPFIBP1Q86W92 1011 aa19.13■□□□□ 0.65
PPP4R3A-202ENST00000554390 NAPGQ99747 312 aaPredicted RBP19.13■□□□□ 0.65
PPP4R3A-202ENST00000554390 ALS2Q96Q42 1657 aa19.13■□□□□ 0.65
PPP4R3A-202ENST00000554390 GSG1L2A8MUP6 293 aa19.13■□□□□ 0.65
PPP4R3A-202ENST00000554390 PRPF6O94906 941 aaKnown RBP19.13■□□□□ 0.65
PPP4R3A-202ENST00000554390 EIF5P55010 431 aaKnown RBP19.13■□□□□ 0.65
PPP4R3A-202ENST00000554390 CTSWP56202 376 aa19.13■□□□□ 0.65
PPP4R3A-202ENST00000554390 EVA1CP58658 441 aa19.13■□□□□ 0.65
PPP4R3A-202ENST00000554390 DPYDQ12882 1025 aa19.13■□□□□ 0.65
PPP4R3A-202ENST00000554390 SAFBQ15424 915 aaKnown RBP eCLIP19.13■□□□□ 0.65
PPP4R3A-202ENST00000554390 WHAMMP3Q1A5X7 153 aa19.13■□□□□ 0.65
PPP4R3A-202ENST00000554390 IGSF22Q8N9C0 903 aa19.13■□□□□ 0.65
PPP4R3A-202ENST00000554390 NAA15Q9BXJ9 866 aaKnown RBP19.13■□□□□ 0.65
PPP4R3A-202ENST00000554390 A0A1B0GTH6 734 aa19.12■□□□□ 0.65
PPP4R3A-202ENST00000554390 TCRBV5S4A2TA0A5A2 114 aa19.12■□□□□ 0.65
PPP4R3A-202ENST00000554390 RNF225M0QZC1 329 aaPredicted RBP19.12■□□□□ 0.65
PPP4R3A-202ENST00000554390 CSF1RP07333 972 aa19.12■□□□□ 0.65
PPP4R3A-202ENST00000554390 TUBBP07437 444 aa19.12■□□□□ 0.65
PPP4R3A-202ENST00000554390 VEGFAP15692 232 aaPredicted RBP19.12■□□□□ 0.65
PPP4R3A-202ENST00000554390 WTAPQ15007 396 aa19.12■□□□□ 0.65
PPP4R3A-202ENST00000554390 NCAPH2Q6IBW4 605 aa19.12■□□□□ 0.65
PPP4R3A-202ENST00000554390 MLKLQ8NB16 471 aa19.12■□□□□ 0.65
PPP4R3A-202ENST00000554390 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.12■□□□□ 0.65
PPP4R3A-202ENST00000554390 HOOK1Q9UJC3 728 aaKnown RBP19.12■□□□□ 0.65
PPP4R3A-202ENST00000554390 CASP14P31944 242 aa19.11■□□□□ 0.65
PPP4R3A-202ENST00000554390 WDR93Q6P2C0 686 aa19.11■□□□□ 0.65
PPP4R3A-202ENST00000554390 CCDC91Q7Z6B0 441 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms