RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 ITGB4P16144 1822 aa7.99□□□□□ -1.13
ATXN3-226ENST00000554350 F8W735 103 aaPredicted RBP7.99□□□□□ -1.13
ATXN3-226ENST00000554350 ZBTB39O15060 712 aa7.99□□□□□ -1.13
ATXN3-226ENST00000554350 HYAL3O43820 417 aaPredicted RBP7.99□□□□□ -1.13
ATXN3-226ENST00000554350 MAP2K2P36507 400 aa7.99□□□□□ -1.13
ATXN3-226ENST00000554350 FXR1P51114 621 aaKnown RBP eCLIP7.99□□□□□ -1.13
ATXN3-226ENST00000554350 NAA30Q147X3 362 aaPredicted RBP7.99□□□□□ -1.13
ATXN3-226ENST00000554350 Q6ZS46 218 aa7.99□□□□□ -1.13
ATXN3-226ENST00000554350 TMEM130Q8N3G9 435 aa7.99□□□□□ -1.13
ATXN3-226ENST00000554350 IL22RA1Q8N6P7 574 aa7.99□□□□□ -1.13
ATXN3-226ENST00000554350 DDX21Q9NR30 783 aaKnown RBP eCLIP7.99□□□□□ -1.13
ATXN3-226ENST00000554350 SRP68Q9UHB9 627 aaKnown RBP7.99□□□□□ -1.13
ATXN3-226ENST00000554350 HACL1Q9UJ83 578 aa7.99□□□□□ -1.13
ATXN3-226ENST00000554350 RGPD2P0DJD1 1756 aa7.99□□□□□ -1.13
ATXN3-226ENST00000554350 USP31Q70CQ4 1352 aa7.98□□□□□ -1.13
ATXN3-226ENST00000554350 GHRHP01286 108 aa7.98□□□□□ -1.13
ATXN3-226ENST00000554350 EPHX2P34913 555 aa7.98□□□□□ -1.13
ATXN3-226ENST00000554350 PRR23CQ6ZRP0 262 aa7.98□□□□□ -1.13
ATXN3-226ENST00000554350 C2CD5Q86YS7 1000 aa7.98□□□□□ -1.13
ATXN3-226ENST00000554350 ZNF622Q969S3 477 aaKnown RBP eCLIP7.98□□□□□ -1.13
ATXN3-226ENST00000554350 AKTIPQ9H8T0 292 aa7.98□□□□□ -1.13
ATXN3-226ENST00000554350 THSD7BQ9C0I4 1608 aa7.98□□□□□ -1.13
ATXN3-226ENST00000554350 H0YIN7 160 aa7.97□□□□□ -1.13
ATXN3-226ENST00000554350 POLRMTO00411 1230 aaKnown RBP7.97□□□□□ -1.13
ATXN3-226ENST00000554350 RPS6KA4O75676 772 aa7.97□□□□□ -1.13
ATXN3-226ENST00000554350 HOXC9P31274 260 aa7.97□□□□□ -1.13
ATXN3-226ENST00000554350 ZAP70P43403 619 aa7.97□□□□□ -1.13
ATXN3-226ENST00000554350 ATP11AP98196 1134 aa7.97□□□□□ -1.13
ATXN3-226ENST00000554350 FMR1Q06787 632 aaKnown RBP eCLIP7.97□□□□□ -1.13
ATXN3-226ENST00000554350 NBPF6Q5VWK0 638 aa7.97□□□□□ -1.13
ATXN3-226ENST00000554350 CIAPIN1Q6FI81 312 aa7.97□□□□□ -1.13
ATXN3-226ENST00000554350 GALNT11Q8NCW6 608 aa7.97□□□□□ -1.13
ATXN3-226ENST00000554350 CLP1Q92989 425 aaKnown RBP7.97□□□□□ -1.13
ATXN3-226ENST00000554350 NBPF4Q96M43 638 aa7.97□□□□□ -1.13
ATXN3-226ENST00000554350 MRPL18Q9H0U6 180 aaKnown RBP7.97□□□□□ -1.13
ATXN3-226ENST00000554350 TAOK3Q9H2K8 898 aa7.97□□□□□ -1.13
ATXN3-226ENST00000554350 MAP2P11137 1827 aaKnown RBP7.96□□□□□ -1.13
ATXN3-226ENST00000554350 CD163L1Q9NR16 1453 aa7.96□□□□□ -1.13
ATXN3-226ENST00000554350 CYP27B1O15528 508 aa7.96□□□□□ -1.14
ATXN3-226ENST00000554350 PNMA8AQ86V59 439 aaPredicted RBP7.96□□□□□ -1.14
ATXN3-226ENST00000554350 SRA1Q9HD15 236 aaKnown RBP7.96□□□□□ -1.14
ATXN3-226ENST00000554350 SCN4AP35499 1836 aa7.96□□□□□ -1.14
ATXN3-226ENST00000554350 DICER1Q9UPY3 1922 aaKnown RBP7.95□□□□□ -1.14
ATXN3-226ENST00000554350 AGGF1Q8N302 714 aaeCLIP7.95□□□□□ -1.14
ATXN3-226ENST00000554350 PIK3R5Q8WYR1 880 aa7.95□□□□□ -1.14
ATXN3-226ENST00000554350 RNF112Q9ULX5 631 aa7.95□□□□□ -1.14
ATXN3-226ENST00000554350 MAP3K19Q56UN5 1328 aa7.95□□□□□ -1.14
ATXN3-226ENST00000554350 RNF123Q5XPI4 1314 aa7.95□□□□□ -1.14
ATXN3-226ENST00000554350 SMG6Q86US8 1419 aaKnown RBP7.95□□□□□ -1.14
ATXN3-226ENST00000554350 PTCD1O75127 700 aaKnown RBP7.94□□□□□ -1.14
ATXN3-226ENST00000554350 KIF4AO95239 1232 aa7.94□□□□□ -1.14
ATXN3-226ENST00000554350 WISP1O95388 367 aa7.94□□□□□ -1.14
ATXN3-226ENST00000554350 CYP2E1P05181 493 aaPredicted RBP7.94□□□□□ -1.14
ATXN3-226ENST00000554350 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.94□□□□□ -1.14
ATXN3-226ENST00000554350 MAP4K3Q8IVH8 894 aa7.94□□□□□ -1.14
ATXN3-226ENST00000554350 TMC1Q8TDI8 760 aa7.94□□□□□ -1.14
ATXN3-226ENST00000554350 GPR152Q8TDT2 470 aa7.94□□□□□ -1.14
ATXN3-226ENST00000554350 RBSNQ9H1K0 784 aa7.94□□□□□ -1.14
ATXN3-226ENST00000554350 ATG3Q9NT62 314 aa7.94□□□□□ -1.14
ATXN3-226ENST00000554350 STIM2Q9P246 746 aa7.94□□□□□ -1.14
ATXN3-226ENST00000554350 CNTNAP4Q9C0A0 1308 aa7.94□□□□□ -1.14
ATXN3-226ENST00000554350 USP42Q9H9J4 1324 aaKnown RBP7.94□□□□□ -1.14
ATXN3-226ENST00000554350 MON2Q7Z3U7 1717 aa7.93□□□□□ -1.14
ATXN3-226ENST00000554350 TRAF5O00463 557 aa7.93□□□□□ -1.14
ATXN3-226ENST00000554350 FBLN1P23142 703 aa7.93□□□□□ -1.14
ATXN3-226ENST00000554350 HDGFL2Q7Z4V5 671 aaPredicted RBP7.93□□□□□ -1.14
ATXN3-226ENST00000554350 RASSF4Q9H2L5 321 aa7.93□□□□□ -1.14
ATXN3-226ENST00000554350 KCNK4Q9NYG8 393 aa7.93□□□□□ -1.14
ATXN3-226ENST00000554350 SEPT3Q9UH03 358 aa7.93□□□□□ -1.14
ATXN3-226ENST00000554350 PPME1Q9Y570 386 aa7.93□□□□□ -1.14
ATXN3-226ENST00000554350 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.93□□□□□ -1.14
ATXN3-226ENST00000554350 ZNF541Q9H0D2 1346 aa7.93□□□□□ -1.14
ATXN3-226ENST00000554350 TM4SF1P30408 202 aa7.92□□□□□ -1.14
ATXN3-226ENST00000554350 HYAL2Q12891 473 aa7.92□□□□□ -1.14
ATXN3-226ENST00000554350 USPL1Q5W0Q7 1092 aa7.92□□□□□ -1.14
ATXN3-226ENST00000554350 CST9Q5W186 159 aa7.92□□□□□ -1.14
ATXN3-226ENST00000554350 CTU1Q7Z7A3 348 aaKnown RBP7.92□□□□□ -1.14
ATXN3-226ENST00000554350 CACTIN-AS1Q8N1I8 211 aa7.92□□□□□ -1.14
ATXN3-226ENST00000554350 UBL7Q96S82 380 aaPredicted RBP7.92□□□□□ -1.14
ATXN3-226ENST00000554350 ZNF408Q9H9D4 720 aa7.92□□□□□ -1.14
ATXN3-226ENST00000554350 FAM13BQ9NYF5 915 aa7.92□□□□□ -1.14
ATXN3-226ENST00000554350 SPG7Q9UQ90 795 aa7.92□□□□□ -1.14
ATXN3-226ENST00000554350 SBNO2Q9Y2G9 1366 aa7.92□□□□□ -1.14
ATXN3-226ENST00000554350 DLEC1Q9Y238 1755 aa7.92□□□□□ -1.14
ATXN3-226ENST00000554350 LINC01387J3KSC0 135 aa7.91□□□□□ -1.14
ATXN3-226ENST00000554350 CELF2O95319 508 aaKnown RBP7.91□□□□□ -1.14
ATXN3-226ENST00000554350 SERPINB2P05120 415 aa7.91□□□□□ -1.14
ATXN3-226ENST00000554350 FSTP19883 344 aa7.91□□□□□ -1.14
ATXN3-226ENST00000554350 CRKLP46109 303 aaKnown RBP7.91□□□□□ -1.14
ATXN3-226ENST00000554350 TXNDC11Q6PKC3 985 aa7.91□□□□□ -1.14
ATXN3-226ENST00000554350 NBPF11Q86T75 865 aa7.91□□□□□ -1.14
ATXN3-226ENST00000554350 CEP120Q8N960 986 aa7.91□□□□□ -1.14
ATXN3-226ENST00000554350 COG3Q96JB2 828 aa7.91□□□□□ -1.14
ATXN3-226ENST00000554350 LACRTQ9GZZ8 138 aa7.91□□□□□ -1.14
ATXN3-226ENST00000554350 MUC3BQ9H195 1237 aa7.91□□□□□ -1.14
ATXN3-226ENST00000554350 TMEM63CQ9P1W3 806 aa7.91□□□□□ -1.14
ATXN3-226ENST00000554350 LTBP3Q9NS15 1303 aa7.91□□□□□ -1.14
ATXN3-226ENST00000554350 ADAMTSL1Q8N6G6 1762 aa7.91□□□□□ -1.14
ATXN3-226ENST00000554350 CUL9Q8IWT3 2517 aa7.91□□□□□ -1.14
ATXN3-226ENST00000554350 FER1L6Q2WGJ9 1857 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms