RNA–Protein interactions for RNA: ENST00000553753.5

HNRNPC-208, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-208ENST00000553753 USP17L2Q6R6M4 530 aa12.23□□□□□ -0.45
HNRNPC-208ENST00000553753 TMEM179Q6ZVK1 233 aa12.23□□□□□ -0.45
HNRNPC-208ENST00000553753 PLEKHM2Q8IWE5 1019 aa12.23□□□□□ -0.45
HNRNPC-208ENST00000553753 FEZ1Q99689 392 aa12.23□□□□□ -0.45
HNRNPC-208ENST00000553753 ASCC2Q9H1I8 757 aaPredicted RBP12.23□□□□□ -0.45
HNRNPC-208ENST00000553753 OSBPL3Q9H4L5 887 aa12.23□□□□□ -0.45
HNRNPC-208ENST00000553753 FMNL1O95466 1100 aaPredicted RBP12.22□□□□□ -0.45
HNRNPC-208ENST00000553753 CTGFP29279 349 aa12.22□□□□□ -0.45
HNRNPC-208ENST00000553753 TDO2P48775 406 aa12.22□□□□□ -0.45
HNRNPC-208ENST00000553753 USP14P54578 494 aa12.22□□□□□ -0.45
HNRNPC-208ENST00000553753 ZYXQ15942 572 aaKnown RBP12.22□□□□□ -0.45
HNRNPC-208ENST00000553753 TICAM2Q86XR7 235 aa12.22□□□□□ -0.45
HNRNPC-208ENST00000553753 IFNL3Q8IZI9 196 aa12.22□□□□□ -0.45
HNRNPC-208ENST00000553753 ANKRD13CQ8N6S4 541 aa12.22□□□□□ -0.45
HNRNPC-208ENST00000553753 ACER1Q8TDN7 264 aa12.22□□□□□ -0.45
HNRNPC-208ENST00000553753 TRIM47Q96LD4 638 aa12.22□□□□□ -0.45
HNRNPC-208ENST00000553753 CCDC17Q96LX7 622 aa12.22□□□□□ -0.45
HNRNPC-208ENST00000553753 NACAP1Q9BZK3 213 aa12.22□□□□□ -0.45
HNRNPC-208ENST00000553753 KIAA1683Q9H0B3 1180 aa12.22□□□□□ -0.45
HNRNPC-208ENST00000553753 EPB41L4AQ9HCS5 686 aaPredicted RBP12.22□□□□□ -0.45
HNRNPC-208ENST00000553753 MINDY4BA8MYZ0 360 aa12.21□□□□□ -0.45
HNRNPC-208ENST00000553753 TRIM6-TRIM34B2RNG4 842 aa12.21□□□□□ -0.45
HNRNPC-208ENST00000553753 GCLCP48506 637 aaPredicted RBP12.21□□□□□ -0.45
HNRNPC-208ENST00000553753 IRX3P78415 501 aaPredicted RBP12.21□□□□□ -0.45
HNRNPC-208ENST00000553753 C12orf42Q96LP6 360 aa12.21□□□□□ -0.45
HNRNPC-208ENST00000553753 AKR1B1P15121 316 aa12.2□□□□□ -0.46
HNRNPC-208ENST00000553753 HOXD10P28358 340 aa12.2□□□□□ -0.46
HNRNPC-208ENST00000553753 PRMT2P55345 433 aa12.2□□□□□ -0.46
HNRNPC-208ENST00000553753 FCGRTP55899 365 aa12.2□□□□□ -0.46
HNRNPC-208ENST00000553753 FAM110CQ1W6H9 321 aa12.2□□□□□ -0.46
HNRNPC-208ENST00000553753 RILPL2Q969X0 211 aa12.2□□□□□ -0.46
HNRNPC-208ENST00000553753 P2RX7Q99572 595 aaKnown RBP12.2□□□□□ -0.46
HNRNPC-208ENST00000553753 MYH8P13535 1937 aa12.2□□□□□ -0.46
HNRNPC-208ENST00000553753 A0A1W2PRG0 241 aa12.2□□□□□ -0.46
HNRNPC-208ENST00000553753 STK11IPQ8N1F8 1099 aa12.2□□□□□ -0.46
HNRNPC-208ENST00000553753 NAPBQ9H115 298 aa12.2□□□□□ -0.46
HNRNPC-208ENST00000553753 MKNK2Q9HBH9 465 aa12.2□□□□□ -0.46
HNRNPC-208ENST00000553753 HELLSQ9NRZ9 838 aa12.2□□□□□ -0.46
HNRNPC-208ENST00000553753 SRRDQ9UH36 339 aa12.2□□□□□ -0.46
HNRNPC-208ENST00000553753 PTCH2Q9Y6C5 1203 aa12.2□□□□□ -0.46
HNRNPC-208ENST00000553753 ZSWIM8A7E2V4 1837 aa12.19□□□□□ -0.46
HNRNPC-208ENST00000553753 VCAM1P19320 739 aa12.19□□□□□ -0.46
HNRNPC-208ENST00000553753 HERVK_113P62684 666 aa12.19□□□□□ -0.46
HNRNPC-208ENST00000553753 SLC9C1Q4G0N8 1177 aa12.19□□□□□ -0.46
HNRNPC-208ENST00000553753 CCDC129Q6ZRS4 1044 aa12.19□□□□□ -0.46
HNRNPC-208ENST00000553753 NBPF11Q86T75 865 aa12.19□□□□□ -0.46
HNRNPC-208ENST00000553753 SIAH1Q8IUQ4 282 aa12.19□□□□□ -0.46
HNRNPC-208ENST00000553753 ZNF287Q9HBT7 754 aa12.19□□□□□ -0.46
HNRNPC-208ENST00000553753 USP17L15C9J2P7 530 aa12.18□□□□□ -0.46
HNRNPC-208ENST00000553753 USP17L13C9JLJ4 530 aa12.18□□□□□ -0.46
HNRNPC-208ENST00000553753 USP17L11C9JVI0 530 aa12.18□□□□□ -0.46
HNRNPC-208ENST00000553753 USP17L18D6R9N7 530 aa12.18□□□□□ -0.46
HNRNPC-208ENST00000553753 USP17L22D6RA61 530 aa12.18□□□□□ -0.46
HNRNPC-208ENST00000553753 USP17L17D6RBQ6 530 aa12.18□□□□□ -0.46
HNRNPC-208ENST00000553753 USP17L19D6RCP7 530 aa12.18□□□□□ -0.46
HNRNPC-208ENST00000553753 USP17L20D6RJB6 530 aa12.18□□□□□ -0.46
HNRNPC-208ENST00000553753 RGS19P49795 217 aa12.18□□□□□ -0.46
HNRNPC-208ENST00000553753 SOX10P56693 466 aa12.18□□□□□ -0.46
HNRNPC-208ENST00000553753 ICA1Q05084 483 aa12.18□□□□□ -0.46
HNRNPC-208ENST00000553753 USP17L24Q0WX57 530 aa12.18□□□□□ -0.46
HNRNPC-208ENST00000553753 MCMDC2Q4G0Z9 681 aa12.18□□□□□ -0.46
HNRNPC-208ENST00000553753 ARMC5Q96C12 935 aa12.18□□□□□ -0.46
HNRNPC-208ENST00000553753 FAM227BQ96M60 508 aa12.18□□□□□ -0.46
HNRNPC-208ENST00000553753 KANSL2Q9H9L4 492 aa12.18□□□□□ -0.46
HNRNPC-208ENST00000553753 ARHGEF10LQ9HCE6 1279 aa12.18□□□□□ -0.46
HNRNPC-208ENST00000553753 ROBO3Q96MS0 1386 aa12.18□□□□□ -0.46
HNRNPC-208ENST00000553753 A0A0D9SFI3 127 aa12.18□□□□□ -0.46
HNRNPC-208ENST00000553753 TNPO2O14787 897 aaKnown RBP12.18□□□□□ -0.46
HNRNPC-208ENST00000553753 FOXP2O15409 715 aa12.18□□□□□ -0.46
HNRNPC-208ENST00000553753 RASA1P20936 1047 aa12.18□□□□□ -0.46
HNRNPC-208ENST00000553753 CATSPERGQ6ZRH7 1159 aa12.18□□□□□ -0.46
HNRNPC-208ENST00000553753 CLEC10AQ8IUN9 316 aa12.18□□□□□ -0.46
HNRNPC-208ENST00000553753 RAET1EQ8TD07 263 aa12.18□□□□□ -0.46
HNRNPC-208ENST00000553753 SH2D4AQ9H788 454 aa12.18□□□□□ -0.46
HNRNPC-208ENST00000553753 MORF4L1Q9UBU8 362 aa12.18□□□□□ -0.46
HNRNPC-208ENST00000553753 TMX2Q9Y320 296 aa12.18□□□□□ -0.46
HNRNPC-208ENST00000553753 MYPNQ86TC9 1320 aa12.17□□□□□ -0.46
HNRNPC-208ENST00000553753 SLC3A2P08195 630 aaKnown RBP12.17□□□□□ -0.46
HNRNPC-208ENST00000553753 EEF2P13639 858 aaKnown RBP12.17□□□□□ -0.46
HNRNPC-208ENST00000553753 SDSP20132 328 aa12.17□□□□□ -0.46
HNRNPC-208ENST00000553753 PRKCZQ05513 592 aa12.17□□□□□ -0.46
HNRNPC-208ENST00000553753 VPS53Q5VIR6 699 aa12.17□□□□□ -0.46
HNRNPC-208ENST00000553753 ZNF444Q8N0Y2 327 aaPredicted RBP12.17□□□□□ -0.46
HNRNPC-208ENST00000553753 GPRC5AQ8NFJ5 357 aa12.17□□□□□ -0.46
HNRNPC-208ENST00000553753 GTF3C2Q8WUA4 911 aaPredicted RBP12.17□□□□□ -0.46
HNRNPC-208ENST00000553753 LPAR1Q92633 364 aa12.17□□□□□ -0.46
HNRNPC-208ENST00000553753 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.17□□□□□ -0.46
HNRNPC-208ENST00000553753 RPAP3Q9H6T3 665 aaPredicted RBP12.17□□□□□ -0.46
HNRNPC-208ENST00000553753 TXNRD2Q9NNW7 524 aa12.17□□□□□ -0.46
HNRNPC-208ENST00000553753 RBPJLQ9UBG7 517 aa12.17□□□□□ -0.46
HNRNPC-208ENST00000553753 KIAA0100Q14667 2235 aaKnown RBP12.16□□□□□ -0.46
HNRNPC-208ENST00000553753 MGAMO43451 1857 aa12.16□□□□□ -0.46
HNRNPC-208ENST00000553753 PRDM1O75626 825 aa12.16□□□□□ -0.46
HNRNPC-208ENST00000553753 PDE4AP27815 886 aa12.16□□□□□ -0.46
HNRNPC-208ENST00000553753 ATP2B2Q01814 1243 aa12.16□□□□□ -0.46
HNRNPC-208ENST00000553753 PDE4BQ07343 736 aa12.16□□□□□ -0.46
HNRNPC-208ENST00000553753 PPARAQ07869 468 aa12.16□□□□□ -0.46
HNRNPC-208ENST00000553753 NMIQ13287 307 aaPredicted RBP12.16□□□□□ -0.46
HNRNPC-208ENST00000553753 COA7Q96BR5 231 aa12.16□□□□□ -0.46
HNRNPC-208ENST00000553753 ZNF333Q96JL9 665 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms