RNA–Protein interactions for RNA: ENST00000553745.5

ABCD4-219, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 2

Gene ABCD4, Length 1,770 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-219ENST00000553745 GADD45BO75293 160 aaPredicted RBP16.43■□□□□ 0.22
ABCD4-219ENST00000553745 PDIA4P13667 645 aaKnown RBP16.43■□□□□ 0.22
ABCD4-219ENST00000553745 HIRAP54198 1017 aaPredicted RBP16.43■□□□□ 0.22
ABCD4-219ENST00000553745 TNFAIP1Q13829 316 aa16.43■□□□□ 0.22
ABCD4-219ENST00000553745 DPY19L2Q6NUT2 758 aa16.43■□□□□ 0.22
ABCD4-219ENST00000553745 ZNF274Q96GC6 653 aaPredicted RBP16.43■□□□□ 0.22
ABCD4-219ENST00000553745 IL17RBQ9NRM6 502 aa16.43■□□□□ 0.22
ABCD4-219ENST00000553745 WDR90Q96KV7 1748 aa16.43■□□□□ 0.22
ABCD4-219ENST00000553745 CCDC69A6NI79 296 aa16.42■□□□□ 0.22
ABCD4-219ENST00000553745 AKR1B1P15121 316 aa16.42■□□□□ 0.22
ABCD4-219ENST00000553745 RXRAP19793 462 aa16.42■□□□□ 0.22
ABCD4-219ENST00000553745 TNNI2P48788 182 aa16.42■□□□□ 0.22
ABCD4-219ENST00000553745 CCT2P78371 535 aaKnown RBP16.42■□□□□ 0.22
ABCD4-219ENST00000553745 RASA3Q14644 834 aa16.42■□□□□ 0.22
ABCD4-219ENST00000553745 IFIT1BQ5T764 474 aaKnown RBP16.42■□□□□ 0.22
ABCD4-219ENST00000553745 ANGEL2Q5VTE6 544 aaKnown RBP16.42■□□□□ 0.22
ABCD4-219ENST00000553745 METTL16Q86W50 562 aaKnown RBP16.42■□□□□ 0.22
ABCD4-219ENST00000553745 L3MBTL3Q96JM7 780 aaPredicted RBP16.42■□□□□ 0.22
ABCD4-219ENST00000553745 MYL10Q9BUA6 226 aa16.42■□□□□ 0.22
ABCD4-219ENST00000553745 TRIM34Q9BYJ4 488 aa16.42■□□□□ 0.22
ABCD4-219ENST00000553745 GDPD2Q9HCC8 539 aa16.42■□□□□ 0.22
ABCD4-219ENST00000553745 NCOA5Q9HCD5 579 aaKnown RBP16.42■□□□□ 0.22
ABCD4-219ENST00000553745 ADARB2Q9NS39 739 aaKnown RBP16.42■□□□□ 0.22
ABCD4-219ENST00000553745 GGA3Q9NZ52 723 aa16.42■□□□□ 0.22
ABCD4-219ENST00000553745 PGAP2Q9UHJ9 254 aa16.42■□□□□ 0.22
ABCD4-219ENST00000553745 HPS5Q9UPZ3 1129 aa16.42■□□□□ 0.22
ABCD4-219ENST00000553745 ATAD5Q96QE3 1844 aa16.42■□□□□ 0.22
ABCD4-219ENST00000553745 FOXD4L6Q3SYB3 417 aaPredicted RBP16.41■□□□□ 0.22
ABCD4-219ENST00000553745 LRSAM1Q6UWE0 723 aa16.41■□□□□ 0.22
ABCD4-219ENST00000553745 FOXD4L3Q6VB84 417 aaPredicted RBP16.41■□□□□ 0.22
ABCD4-219ENST00000553745 MICU3Q86XE3 530 aa16.41■□□□□ 0.22
ABCD4-219ENST00000553745 NEDD1Q8NHV4 660 aa16.41■□□□□ 0.22
ABCD4-219ENST00000553745 CNPY2Q9Y2B0 182 aa16.41■□□□□ 0.22
ABCD4-219ENST00000553745 ATP6V1DQ9Y5K8 247 aa16.41■□□□□ 0.22
ABCD4-219ENST00000553745 GLTPD2A6NH11 291 aa16.41■□□□□ 0.22
ABCD4-219ENST00000553745 RCSD1Q6JBY9 416 aa16.41■□□□□ 0.22
ABCD4-219ENST00000553745 FOXP4Q8IVH2 680 aaPredicted RBP16.41■□□□□ 0.22
ABCD4-219ENST00000553745 RBSNQ9H1K0 784 aa16.41■□□□□ 0.22
ABCD4-219ENST00000553745 TCP11L1Q9NUJ3 509 aa16.41■□□□□ 0.22
ABCD4-219ENST00000553745 SLC12A7Q9Y666 1083 aa16.41■□□□□ 0.22
ABCD4-219ENST00000553745 ZBTB43O43298 467 aa16.4■□□□□ 0.22
ABCD4-219ENST00000553745 NASPP49321 788 aaPredicted RBP16.4■□□□□ 0.22
ABCD4-219ENST00000553745 APOBEC3FQ8IUX4 373 aaKnown RBP16.4■□□□□ 0.22
ABCD4-219ENST00000553745 ZNF654Q8IZM8 581 aa16.4■□□□□ 0.22
ABCD4-219ENST00000553745 TMTC2Q8N394 836 aa16.4■□□□□ 0.22
ABCD4-219ENST00000553745 TEPSINQ96N21 525 aa16.4■□□□□ 0.22
ABCD4-219ENST00000553745 PPP1R9BQ96SB3 815 aa16.4■□□□□ 0.22
ABCD4-219ENST00000553745 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.4■□□□□ 0.22
ABCD4-219ENST00000553745 HERC5Q9UII4 1024 aaKnown RBP16.4■□□□□ 0.22
ABCD4-219ENST00000553745 NID2Q14112 1375 aa16.4■□□□□ 0.22
ABCD4-219ENST00000553745 METAP2P50579 478 aaKnown RBP eCLIP16.39■□□□□ 0.21
ABCD4-219ENST00000553745 SHROOM1Q2M3G4 852 aaPredicted RBP16.39■□□□□ 0.21
ABCD4-219ENST00000553745 TATDN1Q6P1N9 297 aa16.39■□□□□ 0.21
ABCD4-219ENST00000553745 CCDC144CPQ8IYA2 1237 aa16.39■□□□□ 0.21
ABCD4-219ENST00000553745 CEP95Q96GE4 821 aa16.39■□□□□ 0.21
ABCD4-219ENST00000553745 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.39■□□□□ 0.213e-6■■■■□ 20.7
ABCD4-219ENST00000553745 TAOK2Q9UL54 1235 aa16.39■□□□□ 0.21
ABCD4-219ENST00000553745 GOLGA8AA7E2F4 631 aa16.38■□□□□ 0.21
ABCD4-219ENST00000553745 CERKLQ49MI3 558 aaPredicted RBP16.38■□□□□ 0.21
ABCD4-219ENST00000553745 CLEC10AQ8IUN9 316 aa16.38■□□□□ 0.21
ABCD4-219ENST00000553745 DEFB129Q9H1M3 183 aa16.38■□□□□ 0.21
ABCD4-219ENST00000553745 STX8Q9UNK0 236 aa16.38■□□□□ 0.21
ABCD4-219ENST00000553745 IGKV6D-41A0A0C4DH26 115 aa16.38■□□□□ 0.21
ABCD4-219ENST00000553745 SYCE3A1L190 88 aa16.38■□□□□ 0.21
ABCD4-219ENST00000553745 MPHOSPH10O00566 681 aaKnown RBP16.38■□□□□ 0.21
ABCD4-219ENST00000553745 JAK2O60674 1132 aa16.38■□□□□ 0.21
ABCD4-219ENST00000553745 GDF11O95390 407 aa16.38■□□□□ 0.21
ABCD4-219ENST00000553745 CTDNEP1O95476 244 aa16.38■□□□□ 0.21
ABCD4-219ENST00000553745 PDCP20941 246 aa16.38■□□□□ 0.21
ABCD4-219ENST00000553745 RRP1BQ14684 758 aaKnown RBP16.38■□□□□ 0.21
ABCD4-219ENST00000553745 CCDC178Q5BJE1 867 aa16.38■□□□□ 0.21
ABCD4-219ENST00000553745 LARP1BQ659C4 914 aaKnown RBP16.38■□□□□ 0.21
ABCD4-219ENST00000553745 SYNE3Q6ZMZ3 975 aa16.38■□□□□ 0.21
ABCD4-219ENST00000553745 DGKHQ86XP1 1220 aa16.38■□□□□ 0.21
ABCD4-219ENST00000553745 CCDC17Q96LX7 622 aa16.38■□□□□ 0.21
ABCD4-219ENST00000553745 RRAGDQ9NQL2 400 aaPredicted RBP16.38■□□□□ 0.21
ABCD4-219ENST00000553745 MYH6P13533 1939 aa16.38■□□□□ 0.21
ABCD4-219ENST00000553745 CDC27P30260 824 aa16.37■□□□□ 0.21
ABCD4-219ENST00000553745 UBE2HP62256 183 aa16.37■□□□□ 0.21
ABCD4-219ENST00000553745 CCDC173Q0VFZ6 552 aa16.37■□□□□ 0.21
ABCD4-219ENST00000553745 MIGA2Q7L4E1 593 aa16.37■□□□□ 0.21
ABCD4-219ENST00000553745 NSUN7Q8NE18 718 aaKnown RBP16.37■□□□□ 0.21
ABCD4-219ENST00000553745 NUP133Q8WUM0 1156 aa16.37■□□□□ 0.21
ABCD4-219ENST00000553745 SYAP1Q96A49 352 aaPredicted RBP16.37■□□□□ 0.21
ABCD4-219ENST00000553745 KAT14Q9H8E8 782 aa16.37■□□□□ 0.21
ABCD4-219ENST00000553745 PITPNM2Q9BZ72 1349 aa16.37■□□□□ 0.21
ABCD4-219ENST00000553745 TBC1D12O60347 775 aa16.36■□□□□ 0.21
ABCD4-219ENST00000553745 DDAH1O94760 285 aa16.36■□□□□ 0.21
ABCD4-219ENST00000553745 EPHX2P34913 555 aa16.36■□□□□ 0.21
ABCD4-219ENST00000553745 NOVP48745 357 aa16.36■□□□□ 0.21
ABCD4-219ENST00000553745 RCAN1P53805 252 aa16.36■□□□□ 0.21
ABCD4-219ENST00000553745 CATIPQ7Z7H3 387 aa16.36■□□□□ 0.21
ABCD4-219ENST00000553745 PNMA1Q8ND90 353 aa16.36■□□□□ 0.21
ABCD4-219ENST00000553745 ANKS1AQ92625 1134 aa16.36■□□□□ 0.21
ABCD4-219ENST00000553745 TMEM47Q9BQJ4 181 aa16.36■□□□□ 0.21
ABCD4-219ENST00000553745 DOCK1Q14185 1865 aa16.36■□□□□ 0.21
ABCD4-219ENST00000553745 SSC5DA1L4H1 1573 aa16.36■□□□□ 0.21
ABCD4-219ENST00000553745 PTPDC1A2A3K4 754 aa16.36■□□□□ 0.21
ABCD4-219ENST00000553745 VPS37CA5D8V6 355 aaPredicted RBP16.36■□□□□ 0.21
ABCD4-219ENST00000553745 JAG1P78504 1218 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms