RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 F13A1P00488 732 aa7.1□□□□□ -1.27
SCFD1-210ENST00000553693 PLCG1P19174 1290 aa7.1□□□□□ -1.27
SCFD1-210ENST00000553693 CDKAL1Q5VV42 579 aa7.1□□□□□ -1.27
SCFD1-210ENST00000553693 PIWIL2Q8TC59 973 aaKnown RBP7.1□□□□□ -1.27
SCFD1-210ENST00000553693 CYB5D2Q8WUJ1 264 aa7.1□□□□□ -1.27
SCFD1-210ENST00000553693 ACSF2Q96CM8 615 aaPredicted RBP7.1□□□□□ -1.27
SCFD1-210ENST00000553693 HSPA12BQ96MM6 686 aa7.1□□□□□ -1.27
SCFD1-210ENST00000553693 KRTAP19-4Q3LI73 84 aa7.09□□□□□ -1.27
SCFD1-210ENST00000553693 TMEM201Q5SNT2 666 aa7.09□□□□□ -1.27
SCFD1-210ENST00000553693 CDH24Q86UP0 819 aa7.09□□□□□ -1.27
SCFD1-210ENST00000553693 FAM13CQ8NE31 585 aa7.09□□□□□ -1.27
SCFD1-210ENST00000553693 FLAD1Q8NFF5 587 aa7.09□□□□□ -1.27
SCFD1-210ENST00000553693 RIN3Q8TB24 985 aa7.09□□□□□ -1.27
SCFD1-210ENST00000553693 MPP2Q14168 576 aa7.08□□□□□ -1.28
SCFD1-210ENST00000553693 LILRA6Q6PI73 481 aa7.08□□□□□ -1.28
SCFD1-210ENST00000553693 ERMP1Q7Z2K6 904 aa7.08□□□□□ -1.28
SCFD1-210ENST00000553693 DNAJB8Q8NHS0 232 aa7.08□□□□□ -1.28
SCFD1-210ENST00000553693 ATP13A1Q9HD20 1204 aa7.08□□□□□ -1.28
SCFD1-210ENST00000553693 SEMA3GQ9NS98 782 aa7.08□□□□□ -1.28
SCFD1-210ENST00000553693 CORINQ9Y5Q5 1042 aa7.08□□□□□ -1.28
SCFD1-210ENST00000553693 ST14Q9Y5Y6 855 aa7.08□□□□□ -1.28
SCFD1-210ENST00000553693 CNTNAP4Q9C0A0 1308 aa7.07□□□□□ -1.28
SCFD1-210ENST00000553693 PRR36Q9H6K5 1346 aa7.07□□□□□ -1.28
SCFD1-210ENST00000553693 H3BS24 57 aa7.07□□□□□ -1.28
SCFD1-210ENST00000553693 FARP2O94887 1054 aaPredicted RBP7.07□□□□□ -1.28
SCFD1-210ENST00000553693 FAM160A1Q05DH4 1040 aa7.07□□□□□ -1.28
SCFD1-210ENST00000553693 TMCO4Q5TGY1 634 aa7.07□□□□□ -1.28
SCFD1-210ENST00000553693 CILP2Q8IUL8 1156 aa7.07□□□□□ -1.28
SCFD1-210ENST00000553693 GOLM1Q8NBJ4 401 aa7.07□□□□□ -1.28
SCFD1-210ENST00000553693 CCDC120Q96HB5 630 aa7.07□□□□□ -1.28
SCFD1-210ENST00000553693 CARS2Q9HA77 564 aaKnown RBP7.07□□□□□ -1.28
SCFD1-210ENST00000553693 PRDM7Q9NQW5 492 aa7.07□□□□□ -1.28
SCFD1-210ENST00000553693 KBTBD4Q9NVX7 518 aa7.07□□□□□ -1.28
SCFD1-210ENST00000553693 CEP131Q9UPN4 1083 aa7.07□□□□□ -1.28
SCFD1-210ENST00000553693 BUD31P41223 144 aaPredicted RBP7.06□□□□□ -1.28
SCFD1-210ENST00000553693 MLECQ14165 292 aa7.06□□□□□ -1.28
SCFD1-210ENST00000553693 CWF19L2Q2TBE0 894 aaKnown RBP7.06□□□□□ -1.28
SCFD1-210ENST00000553693 FAM196AQ6ZSG2 479 aa7.06□□□□□ -1.28
SCFD1-210ENST00000553693 HS2ST1Q7LGA3 356 aa7.06□□□□□ -1.28
SCFD1-210ENST00000553693 TMPRSS7Q7RTY8 843 aa7.06□□□□□ -1.28
SCFD1-210ENST00000553693 SLFN12Q8IYM2 578 aa7.06□□□□□ -1.28
SCFD1-210ENST00000553693 FAM168AQ92567 244 aa7.06□□□□□ -1.28
SCFD1-210ENST00000553693 REV1Q9UBZ9 1251 aa7.06□□□□□ -1.28
SCFD1-210ENST00000553693 MINDY4BA8MYZ0 360 aa7.05□□□□□ -1.28
SCFD1-210ENST00000553693 B8ZZF3 427 aa7.05□□□□□ -1.28
SCFD1-210ENST00000553693 HTR3BO95264 441 aa7.05□□□□□ -1.28
SCFD1-210ENST00000553693 TNK2Q07912 1038 aa7.05□□□□□ -1.28
SCFD1-210ENST00000553693 MRPL58Q14197 206 aaKnown RBP7.05□□□□□ -1.28
SCFD1-210ENST00000553693 REC114Q7Z4M0 266 aa7.05□□□□□ -1.28
SCFD1-210ENST00000553693 TRIT1Q9H3H1 467 aaKnown RBP7.05□□□□□ -1.28
SCFD1-210ENST00000553693 ZSWIM5Q9P217 1185 aa7.05□□□□□ -1.28
SCFD1-210ENST00000553693 SUPT16HQ9Y5B9 1047 aaKnown RBP7.05□□□□□ -1.28
SCFD1-210ENST00000553693 ROBO2Q9HCK4 1378 aa7.05□□□□□ -1.28
SCFD1-210ENST00000553693 TNNI2P48788 182 aa7.04□□□□□ -1.28
SCFD1-210ENST00000553693 PKN1Q16512 942 aa7.04□□□□□ -1.28
SCFD1-210ENST00000553693 TMEM40Q8WWA1 233 aa7.04□□□□□ -1.28
SCFD1-210ENST00000553693 UBE2FQ969M7 185 aa7.04□□□□□ -1.28
SCFD1-210ENST00000553693 LRRC3Q9BY71 257 aa7.04□□□□□ -1.28
SCFD1-210ENST00000553693 KCNQ5Q9NR82 932 aa7.04□□□□□ -1.28
SCFD1-210ENST00000553693 KLHL3Q9UH77 587 aa7.04□□□□□ -1.28
SCFD1-210ENST00000553693 GGT7Q9UJ14 662 aa7.04□□□□□ -1.28
SCFD1-210ENST00000553693 KCNH3Q9ULD8 1083 aa7.04□□□□□ -1.28
SCFD1-210ENST00000553693 CTNND2Q9UQB3 1225 aa7.04□□□□□ -1.28
SCFD1-210ENST00000553693 POLR3KQ9Y2Y1 108 aaPredicted RBP7.04□□□□□ -1.28
SCFD1-210ENST00000553693 GRIN3BO60391 1043 aa7.03□□□□□ -1.28
SCFD1-210ENST00000553693 GARTP22102 1010 aa7.03□□□□□ -1.28
SCFD1-210ENST00000553693 EIF4A3P38919 411 aaKnown RBP7.03□□□□□ -1.28
SCFD1-210ENST00000553693 AFMP43652 599 aa7.03□□□□□ -1.28
SCFD1-210ENST00000553693 CHMP4BP1P59074 171 aa7.03□□□□□ -1.28
SCFD1-210ENST00000553693 ZSWIM9Q86XI8 627 aa7.03□□□□□ -1.28
SCFD1-210ENST00000553693 PPP1R13LQ8WUF5 828 aa7.03□□□□□ -1.28
SCFD1-210ENST00000553693 RNF141Q8WVD5 230 aa7.03□□□□□ -1.28
SCFD1-210ENST00000553693 COPRSQ9NQ92 184 aa7.03□□□□□ -1.28
SCFD1-210ENST00000553693 UPK3BL1B0FP48 263 aa7.02□□□□□ -1.29
SCFD1-210ENST00000553693 UPK3BL2E5RIL1 263 aa7.02□□□□□ -1.29
SCFD1-210ENST00000553693 KCNMB1Q16558 191 aa7.02□□□□□ -1.29
SCFD1-210ENST00000553693 PHACTR4Q8IZ21 702 aa7.02□□□□□ -1.29
SCFD1-210ENST00000553693 FBXO27Q8NI29 283 aa7.02□□□□□ -1.29
SCFD1-210ENST00000553693 CCDC74BQ96LY2 380 aa7.02□□□□□ -1.29
SCFD1-210ENST00000553693 Q96M66 194 aa7.02□□□□□ -1.29
SCFD1-210ENST00000553693 ALPK1Q96QP1 1244 aa7.02□□□□□ -1.29
SCFD1-210ENST00000553693 ASPNQ9BXN1 380 aa7.02□□□□□ -1.29
SCFD1-210ENST00000553693 GPATCH2Q9NW75 528 aa7.02□□□□□ -1.29
SCFD1-210ENST00000553693 TLR3O15455 904 aaKnown RBP7.01□□□□□ -1.29
SCFD1-210ENST00000553693 GDNFP39905 211 aa7.01□□□□□ -1.29
SCFD1-210ENST00000553693 FBXL19Q6PCT2 694 aa7.01□□□□□ -1.29
SCFD1-210ENST00000553693 DTWD2Q8NBA8 298 aa7.01□□□□□ -1.29
SCFD1-210ENST00000553693 GPR62Q9BZJ7 368 aa7.01□□□□□ -1.29
SCFD1-210ENST00000553693 FAM53CQ9NYF3 392 aa7.01□□□□□ -1.29
SCFD1-210ENST00000553693 SLAMF8Q9P0V8 285 aa7.01□□□□□ -1.29
SCFD1-210ENST00000553693 CHURC1-FNTBB4DL54 471 aa7□□□□□ -1.29
SCFD1-210ENST00000553693 GREM1O60565 184 aa7□□□□□ -1.29
SCFD1-210ENST00000553693 ZNF16P17020 682 aaPredicted RBP7□□□□□ -1.29
SCFD1-210ENST00000553693 KSR1Q8IVT5 923 aa7□□□□□ -1.29
SCFD1-210ENST00000553693 KREMEN1Q96MU8 473 aa7□□□□□ -1.29
SCFD1-210ENST00000553693 GMIPQ9P107 970 aa7□□□□□ -1.29
SCFD1-210ENST00000553693 ATE1O95260 518 aa6.99□□□□□ -1.29
SCFD1-210ENST00000553693 RAC2P15153 192 aa6.99□□□□□ -1.29
SCFD1-210ENST00000553693 TPP2P29144 1249 aaPredicted RBP6.99□□□□□ -1.29
SCFD1-210ENST00000553693 GAB4Q2WGN9 574 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms