RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 CCDC163A0A0D9SF12 145 aa5.46□□□□□ -1.54
TDP1-207ENST00000553617 MEGF11A6BM72 1044 aa5.46□□□□□ -1.54
TDP1-207ENST00000553617 RFPL3O75679 317 aa5.46□□□□□ -1.54
TDP1-207ENST00000553617 CAPNS1P04632 268 aa5.46□□□□□ -1.54
TDP1-207ENST00000553617 NEFMP07197 916 aa5.46□□□□□ -1.54
TDP1-207ENST00000553617 DGKGP49619 791 aa5.46□□□□□ -1.54
TDP1-207ENST00000553617 NKG7Q16617 165 aa5.46□□□□□ -1.54
TDP1-207ENST00000553617 PLEKHG6Q3KR16 790 aa5.46□□□□□ -1.54
TDP1-207ENST00000553617 FOXB2Q5VYV0 432 aa5.46□□□□□ -1.54
TDP1-207ENST00000553617 THNSL2Q86YJ6 484 aa5.46□□□□□ -1.54
TDP1-207ENST00000553617 HID1Q8IV36 788 aa5.46□□□□□ -1.54
TDP1-207ENST00000553617 SVOPQ8N4V2 548 aa5.46□□□□□ -1.54
TDP1-207ENST00000553617 ZNF513Q8N8E2 541 aaPredicted RBP5.46□□□□□ -1.54
TDP1-207ENST00000553617 DCAF11Q8TEB1 546 aa5.46□□□□□ -1.54
TDP1-207ENST00000553617 NINJ1Q92982 152 aa5.46□□□□□ -1.54
TDP1-207ENST00000553617 EXOC2Q96KP1 924 aa5.46□□□□□ -1.54
TDP1-207ENST00000553617 DHRS1Q96LJ7 313 aa5.46□□□□□ -1.54
TDP1-207ENST00000553617 SLC6A18Q96N87 628 aa5.46□□□□□ -1.54
TDP1-207ENST00000553617 FANCD2OSQ96PS1 177 aa5.46□□□□□ -1.54
TDP1-207ENST00000553617 GSX1Q9H4S2 264 aaPredicted RBP5.46□□□□□ -1.54
TDP1-207ENST00000553617 ARHGEF4Q9NR80 690 aa5.46□□□□□ -1.54
TDP1-207ENST00000553617 DDX56Q9NY93 547 aaKnown RBP5.46□□□□□ -1.54
TDP1-207ENST00000553617 A0A1W2PQU0 124 aa5.45□□□□□ -1.54
TDP1-207ENST00000553617 C9IYK1 514 aa5.45□□□□□ -1.54
TDP1-207ENST00000553617 DLL1O00548 723 aa5.45□□□□□ -1.54
TDP1-207ENST00000553617 KCNQ2O43526 872 aa5.45□□□□□ -1.54
TDP1-207ENST00000553617 WISP1O95388 367 aa5.45□□□□□ -1.54
TDP1-207ENST00000553617 HCLS1P14317 486 aaPredicted RBP5.45□□□□□ -1.54
TDP1-207ENST00000553617 POU3F3P20264 500 aaPredicted RBP5.45□□□□□ -1.54
TDP1-207ENST00000553617 SLBPQ14493 270 aaKnown RBP eCLIP5.45□□□□□ -1.54
TDP1-207ENST00000553617 LYPD4Q6UWN0 246 aa5.45□□□□□ -1.54
TDP1-207ENST00000553617 UBE3DQ7Z6J8 389 aa5.45□□□□□ -1.54
TDP1-207ENST00000553617 FBXO11Q86XK2 927 aa5.45□□□□□ -1.54
TDP1-207ENST00000553617 PHACTR4Q8IZ21 702 aa5.45□□□□□ -1.54
TDP1-207ENST00000553617 ZNF507Q8TCN5 953 aa5.45□□□□□ -1.54
TDP1-207ENST00000553617 SMARCC1Q92922 1105 aaPredicted RBP5.45□□□□□ -1.54
TDP1-207ENST00000553617 MFSD3Q96ES6 412 aa5.45□□□□□ -1.54
TDP1-207ENST00000553617 CCDC74BQ96LY2 380 aa5.45□□□□□ -1.54
TDP1-207ENST00000553617 KIF2CQ99661 725 aa5.45□□□□□ -1.54
TDP1-207ENST00000553617 IRF2BPLQ9H1B7 796 aa5.45□□□□□ -1.54
TDP1-207ENST00000553617 SUGCTQ9HAC7 445 aa5.45□□□□□ -1.54
TDP1-207ENST00000553617 RAD18Q9NS91 495 aa5.45□□□□□ -1.54
TDP1-207ENST00000553617 TYW1Q9NV66 732 aaKnown RBP5.45□□□□□ -1.54
TDP1-207ENST00000553617 A0A087X0B3 334 aa5.44□□□□□ -1.54
TDP1-207ENST00000553617 ANKRD34BA5PLL1 514 aa5.44□□□□□ -1.54
TDP1-207ENST00000553617 CBFA2T2O43439 604 aa5.44□□□□□ -1.54
TDP1-207ENST00000553617 BCRP11274 1271 aa5.44□□□□□ -1.54
TDP1-207ENST00000553617 ADH5P11766 374 aa5.44□□□□□ -1.54
TDP1-207ENST00000553617 PABPC4Q13310 644 aaKnown RBP eCLIP5.44□□□□□ -1.54
TDP1-207ENST00000553617 DUOXA2Q1HG44 320 aa5.44□□□□□ -1.54
TDP1-207ENST00000553617 AKAP4Q5JQC9 854 aa5.44□□□□□ -1.54
TDP1-207ENST00000553617 TDRD10Q5VZ19 366 aaKnown RBP5.44□□□□□ -1.54
TDP1-207ENST00000553617 KIAA1211Q6ZU35 1233 aa5.44□□□□□ -1.54
TDP1-207ENST00000553617 NIM1KQ8IY84 436 aa5.44□□□□□ -1.54
TDP1-207ENST00000553617 SMG8Q8ND04 991 aaKnown RBP5.44□□□□□ -1.54
TDP1-207ENST00000553617 CYB5D2Q8WUJ1 264 aa5.44□□□□□ -1.54
TDP1-207ENST00000553617 HAUS7Q99871 368 aa5.44□□□□□ -1.54
TDP1-207ENST00000553617 DPH2Q9BQC3 489 aaPredicted RBP5.44□□□□□ -1.54
TDP1-207ENST00000553617 RUSC1Q9BVN2 902 aa5.44□□□□□ -1.54
TDP1-207ENST00000553617 KLHL25Q9H0H3 589 aa5.44□□□□□ -1.54
TDP1-207ENST00000553617 ATXN3LQ9H3M9 355 aa5.44□□□□□ -1.54
TDP1-207ENST00000553617 NCOA5Q9HCD5 579 aaKnown RBP5.44□□□□□ -1.54
TDP1-207ENST00000553617 CWC22Q9HCG8 908 aaKnown RBP5.44□□□□□ -1.54
TDP1-207ENST00000553617 COL17A1Q9UMD9 1497 aaPredicted RBP5.44□□□□□ -1.54
TDP1-207ENST00000553617 AGRPO00253 132 aa5.43□□□□□ -1.54
TDP1-207ENST00000553617 PLD2O14939 933 aa5.43□□□□□ -1.54
TDP1-207ENST00000553617 TIAF1O95411 115 aa5.43□□□□□ -1.54
TDP1-207ENST00000553617 CST3P01034 146 aaPredicted RBP5.43□□□□□ -1.54
TDP1-207ENST00000553617 EPHX1P07099 455 aa5.43□□□□□ -1.54
TDP1-207ENST00000553617 CELA2BP08218 269 aaPredicted RBP5.43□□□□□ -1.54
TDP1-207ENST00000553617 NAT2P11245 290 aa5.43□□□□□ -1.54
TDP1-207ENST00000553617 STAT3P40763 770 aa5.43□□□□□ -1.54
TDP1-207ENST00000553617 TTLL4Q14679 1199 aa5.43□□□□□ -1.54
TDP1-207ENST00000553617 CBX2Q14781 532 aaPredicted RBP5.43□□□□□ -1.54
TDP1-207ENST00000553617 C21orf62-AS1Q17RA5 79 aa5.43□□□□□ -1.54
TDP1-207ENST00000553617 AXDND1Q5T1B0 1012 aaPredicted RBP5.43□□□□□ -1.54
TDP1-207ENST00000553617 PRAMEF13Q5VWM6 474 aa5.43□□□□□ -1.54
TDP1-207ENST00000553617 FMR1NBQ8N0W7 255 aaPredicted RBP5.43□□□□□ -1.54
TDP1-207ENST00000553617 KCT2Q8NC54 265 aa5.43□□□□□ -1.54
TDP1-207ENST00000553617 BAHD1Q8TBE0 780 aaPredicted RBP5.43□□□□□ -1.54
TDP1-207ENST00000553617 PPP1R13LQ8WUF5 828 aa5.43□□□□□ -1.54
TDP1-207ENST00000553617 ISL2Q96A47 359 aa5.43□□□□□ -1.54
TDP1-207ENST00000553617 DHRS4Q9BTZ2 278 aa5.43□□□□□ -1.54
TDP1-207ENST00000553617 FAM126AQ9BYI3 521 aaPredicted RBP5.43□□□□□ -1.54
TDP1-207ENST00000553617 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.43□□□□□ -1.54
TDP1-207ENST00000553617 PICK1Q9NRD5 415 aa5.43□□□□□ -1.54
TDP1-207ENST00000553617 APEX2Q9UBZ4 518 aa5.43□□□□□ -1.54
TDP1-207ENST00000553617 MRPS23Q9Y3D9 190 aaKnown RBP5.43□□□□□ -1.54
TDP1-207ENST00000553617 A0A0A0MRY4 1105 aa5.42□□□□□ -1.54
TDP1-207ENST00000553617 CLEC3AO75596 197 aa5.42□□□□□ -1.54
TDP1-207ENST00000553617 IGHA1P01876 353 aa5.42□□□□□ -1.54
TDP1-207ENST00000553617 PDGFRBP09619 1106 aa5.42□□□□□ -1.54
TDP1-207ENST00000553617 L1CAMP32004 1257 aa5.42□□□□□ -1.54
TDP1-207ENST00000553617 GBP1P32455 592 aa5.42□□□□□ -1.54
TDP1-207ENST00000553617 PPP2R2AP63151 447 aa5.42□□□□□ -1.54
TDP1-207ENST00000553617 SOX4Q06945 474 aaPredicted RBP5.42□□□□□ -1.54
TDP1-207ENST00000553617 SV2CQ496J9 727 aa5.42□□□□□ -1.54
TDP1-207ENST00000553617 FNDC3BQ53EP0 1204 aaKnown RBP5.42□□□□□ -1.54
TDP1-207ENST00000553617 ANKRD39Q53RE8 183 aa5.42□□□□□ -1.54
TDP1-207ENST00000553617 FAM209AQ5JX71 171 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms