RNA–Protein interactions for RNA: ENST00000553508.5

PCNX1-205, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 645 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-205ENST00000553508 PHACTR4Q8IZ21 702 aa11.06□□□□□ -0.64
PCNX1-205ENST00000553508 ABI1Q8IZP0 508 aa11.06□□□□□ -0.64
PCNX1-205ENST00000553508 MFSD4AQ8N468 514 aa11.06□□□□□ -0.64
PCNX1-205ENST00000553508 CYB5D2Q8WUJ1 264 aa11.06□□□□□ -0.64
PCNX1-205ENST00000553508 TNKS2Q9H2K2 1166 aa11.06□□□□□ -0.64
PCNX1-205ENST00000553508 CEP131Q9UPN4 1083 aa11.06□□□□□ -0.64
PCNX1-205ENST00000553508 TNNI2P48788 182 aa11.05□□□□□ -0.64
PCNX1-205ENST00000553508 CLCQ05315 142 aa11.05□□□□□ -0.64
PCNX1-205ENST00000553508 DNAJB8Q8NHS0 232 aa11.05□□□□□ -0.64
PCNX1-205ENST00000553508 BAHD1Q8TBE0 780 aaPredicted RBP11.05□□□□□ -0.64
PCNX1-205ENST00000553508 DDX41Q9UJV9 622 aaKnown RBP11.05□□□□□ -0.64
PCNX1-205ENST00000553508 ETV3P41162 512 aa11.04□□□□□ -0.64
PCNX1-205ENST00000553508 HDLBPQ00341 1268 aaKnown RBP11.04□□□□□ -0.64
PCNX1-205ENST00000553508 PPP1R13LQ8WUF5 828 aa11.04□□□□□ -0.64
PCNX1-205ENST00000553508 HSPA12BQ96MM6 686 aa11.04□□□□□ -0.64
PCNX1-205ENST00000553508 KIF2CQ99661 725 aa11.04□□□□□ -0.64
PCNX1-205ENST00000553508 ARSHQ5FYA8 562 aa11.03□□□□□ -0.64
PCNX1-205ENST00000553508 METTL16Q86W50 562 aaKnown RBP11.03□□□□□ -0.64
PCNX1-205ENST00000553508 WFDC3Q8IUB2 231 aa11.03□□□□□ -0.64
PCNX1-205ENST00000553508 SLFN12Q8IYM2 578 aa11.03□□□□□ -0.64
PCNX1-205ENST00000553508 SNX11Q9Y5W9 270 aa11.03□□□□□ -0.64
PCNX1-205ENST00000553508 SLC22A31A6NKX4 558 aa11.02□□□□□ -0.65
PCNX1-205ENST00000553508 H3BS24 57 aa11.02□□□□□ -0.65
PCNX1-205ENST00000553508 ZNF865P0CJ78 1059 aaPredicted RBP11.02□□□□□ -0.65
PCNX1-205ENST00000553508 IRAK1P51617 712 aa11.02□□□□□ -0.65
PCNX1-205ENST00000553508 PLCL1Q15111 1095 aa11.02□□□□□ -0.65
PCNX1-205ENST00000553508 NT5DC4Q86YG4 428 aa11.02□□□□□ -0.65
PCNX1-205ENST00000553508 CCDC74BQ96LY2 380 aa11.02□□□□□ -0.65
PCNX1-205ENST00000553508 CAPN6Q9Y6Q1 641 aa11.02□□□□□ -0.65
PCNX1-205ENST00000553508 ZNF165P49910 485 aa11.01□□□□□ -0.65
PCNX1-205ENST00000553508 SLITRK4Q8IW52 837 aa11.01□□□□□ -0.65
PCNX1-205ENST00000553508 ZNF654Q8IZM8 581 aa11.01□□□□□ -0.65
PCNX1-205ENST00000553508 AGBL5Q8NDL9 886 aa11.01□□□□□ -0.65
PCNX1-205ENST00000553508 ATE1O95260 518 aa11□□□□□ -0.65
PCNX1-205ENST00000553508 GBP1P32455 592 aa11□□□□□ -0.65
PCNX1-205ENST00000553508 CLCN7P51798 805 aa11□□□□□ -0.65
PCNX1-205ENST00000553508 TNK2Q07912 1038 aa11□□□□□ -0.65
PCNX1-205ENST00000553508 IKZF1Q13422 519 aa11□□□□□ -0.65
PCNX1-205ENST00000553508 C22orf34Q6ZV56 151 aa11□□□□□ -0.65
PCNX1-205ENST00000553508 ASB11Q8WXH4 323 aa11□□□□□ -0.65
PCNX1-205ENST00000553508 ANTXR1Q9H6X2 564 aa11□□□□□ -0.65
PCNX1-205ENST00000553508 EHMT1Q9H9B1 1298 aa11□□□□□ -0.65
PCNX1-205ENST00000553508 RAG1P15918 1043 aa10.99□□□□□ -0.65
PCNX1-205ENST00000553508 KIR3DL1P43629 444 aa10.99□□□□□ -0.65
PCNX1-205ENST00000553508 CHMP4BP1P59074 171 aa10.99□□□□□ -0.65
PCNX1-205ENST00000553508 OVOS1Q6IE37 1185 aa10.99□□□□□ -0.65
PCNX1-205ENST00000553508 GMIPQ9P107 970 aa10.99□□□□□ -0.65
PCNX1-205ENST00000553508 ZSWIM5Q9P217 1185 aa10.99□□□□□ -0.65
PCNX1-205ENST00000553508 PITPNM2Q9BZ72 1349 aa10.99□□□□□ -0.65
PCNX1-205ENST00000553508 LRRN2O75325 713 aa10.98□□□□□ -0.65
PCNX1-205ENST00000553508 RBM25P49756 843 aaKnown RBP10.98□□□□□ -0.65
PCNX1-205ENST00000553508 PAK2Q13177 524 aa10.98□□□□□ -0.65
PCNX1-205ENST00000553508 ANGEL2Q5VTE6 544 aaKnown RBP10.98□□□□□ -0.65
PCNX1-205ENST00000553508 REXO1Q8N1G1 1221 aaKnown RBP10.98□□□□□ -0.65
PCNX1-205ENST00000553508 COX4I2Q96KJ9 171 aa10.98□□□□□ -0.65
PCNX1-205ENST00000553508 Q96M66 194 aa10.98□□□□□ -0.65
PCNX1-205ENST00000553508 ATP13A1Q9HD20 1204 aa10.98□□□□□ -0.65
PCNX1-205ENST00000553508 SEMA3GQ9NS98 782 aa10.98□□□□□ -0.65
PCNX1-205ENST00000553508 ADGRE2Q9UHX3 823 aa10.98□□□□□ -0.65
PCNX1-205ENST00000553508 ST14Q9Y5Y6 855 aa10.98□□□□□ -0.65
PCNX1-205ENST00000553508 POLR2BP30876 1174 aaKnown RBP10.97□□□□□ -0.65
PCNX1-205ENST00000553508 FBXW10Q5XX13 1052 aa10.97□□□□□ -0.65
PCNX1-205ENST00000553508 UBE2FQ969M7 185 aa10.97□□□□□ -0.65
PCNX1-205ENST00000553508 PRDM7Q9NQW5 492 aa10.97□□□□□ -0.65
PCNX1-205ENST00000553508 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.97□□□□□ -0.65
PCNX1-205ENST00000553508 FUT4P22083 530 aa10.96□□□□□ -0.65
PCNX1-205ENST00000553508 PI4K2BQ8TCG2 481 aa10.96□□□□□ -0.65
PCNX1-205ENST00000553508 ATG4CQ96DT6 458 aa10.96□□□□□ -0.65
PCNX1-205ENST00000553508 KREMEN1Q96MU8 473 aa10.96□□□□□ -0.65
PCNX1-205ENST00000553508 RGS13O14921 159 aa10.95□□□□□ -0.66
PCNX1-205ENST00000553508 ZP2Q05996 745 aa10.95□□□□□ -0.66
PCNX1-205ENST00000553508 FERD3LQ96RJ6 166 aa10.95□□□□□ -0.66
PCNX1-205ENST00000553508 WASH4PA8MWX3 477 aa10.94□□□□□ -0.66
PCNX1-205ENST00000553508 TAL1P17542 331 aaPredicted RBP10.94□□□□□ -0.66
PCNX1-205ENST00000553508 ZNF792Q3KQV3 632 aa10.94□□□□□ -0.66
PCNX1-205ENST00000553508 NLRC3Q7RTR2 1065 aa10.94□□□□□ -0.66
PCNX1-205ENST00000553508 RNF141Q8WVD5 230 aa10.94□□□□□ -0.66
PCNX1-205ENST00000553508 PPT2Q9UMR5 302 aa10.94□□□□□ -0.66
PCNX1-205ENST00000553508 FAM86C2PA6NEL3 165 aa10.93□□□□□ -0.66
PCNX1-205ENST00000553508 UBOX5O94941 541 aa10.93□□□□□ -0.66
PCNX1-205ENST00000553508 TMEM40Q8WWA1 233 aa10.93□□□□□ -0.66
PCNX1-205ENST00000553508 CNNM2Q9H8M5 875 aa10.93□□□□□ -0.66
PCNX1-205ENST00000553508 ADAMTS6Q9UKP5 1117 aa10.93□□□□□ -0.66
PCNX1-205ENST00000553508 KCNH3Q9ULD8 1083 aa10.93□□□□□ -0.66
PCNX1-205ENST00000553508 LRRFIP1Q32MZ4 808 aaKnown RBP10.92□□□□□ -0.66
PCNX1-205ENST00000553508 CDCP2Q5VXM1 449 aa10.92□□□□□ -0.66
PCNX1-205ENST00000553508 DTWD2Q8NBA8 298 aa10.92□□□□□ -0.66
PCNX1-205ENST00000553508 PIWIL2Q8TC59 973 aaKnown RBP10.92□□□□□ -0.66
PCNX1-205ENST00000553508 ACBD3Q9H3P7 528 aa10.92□□□□□ -0.66
PCNX1-205ENST00000553508 CARS2Q9HA77 564 aaKnown RBP10.92□□□□□ -0.66
PCNX1-205ENST00000553508 MBNL3Q9NUK0 354 aaKnown RBP10.92□□□□□ -0.66
PCNX1-205ENST00000553508 RNASE1P07998 156 aaKnown RBP10.91□□□□□ -0.66
PCNX1-205ENST00000553508 NME1P15531 152 aaKnown RBP10.91□□□□□ -0.66
PCNX1-205ENST00000553508 RC3H2Q9HBD1 1191 aaKnown RBP10.91□□□□□ -0.66
PCNX1-205ENST00000553508 GINM1Q9NU53 330 aa10.91□□□□□ -0.66
PCNX1-205ENST00000553508 ZNRF3Q9ULT6 936 aa10.91□□□□□ -0.66
PCNX1-205ENST00000553508 EFR3BQ9Y2G0 817 aa10.91□□□□□ -0.66
PCNX1-205ENST00000553508 COL17A1Q9UMD9 1497 aaPredicted RBP10.91□□□□□ -0.66
PCNX1-205ENST00000553508 MCTP1Q6DN14 999 aa10.9□□□□□ -0.66
PCNX1-205ENST00000553508 CCDC81Q6ZN84 652 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms