RNA–Protein interactions for RNA: ENST00000553396.1

LINC00517-201, long intergenic non-protein coding RNA 517, humanhuman

TSL 3

Gene LINC00517, Length 774 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-201ENST00000553396 CTR9Q6PD62 1173 aa12.24□□□□□ -0.45
LINC00517-201ENST00000553396 DOCK3Q8IZD9 2030 aa12.24□□□□□ -0.45
LINC00517-201ENST00000553396 STK11IPQ8N1F8 1099 aa12.24□□□□□ -0.45
LINC00517-201ENST00000553396 EPB41L4AQ9HCS5 686 aaPredicted RBP12.24□□□□□ -0.45
LINC00517-201ENST00000553396 ARPP21Q9UBL0 812 aaPredicted RBP12.24□□□□□ -0.45
LINC00517-201ENST00000553396 SWAP70Q9UH65 585 aa12.24□□□□□ -0.45
LINC00517-201ENST00000553396 PNMA3Q9UL41 463 aa12.24□□□□□ -0.45
LINC00517-201ENST00000553396 PTPN22Q9Y2R2 807 aa12.24□□□□□ -0.45
LINC00517-201ENST00000553396 GSG1L2A8MUP6 293 aa12.23□□□□□ -0.45
LINC00517-201ENST00000553396 C19orf81C9J6K1 198 aa12.23□□□□□ -0.45
LINC00517-201ENST00000553396 AKR1B1P15121 316 aa12.23□□□□□ -0.45
LINC00517-201ENST00000553396 GUCY1A2P33402 732 aa12.23□□□□□ -0.45
LINC00517-201ENST00000553396 PSMC4P43686 418 aa12.23□□□□□ -0.45
LINC00517-201ENST00000553396 TDO2P48775 406 aa12.23□□□□□ -0.45
LINC00517-201ENST00000553396 CDK8P49336 464 aa12.23□□□□□ -0.45
LINC00517-201ENST00000553396 PABPC4Q13310 644 aaKnown RBP eCLIP12.23□□□□□ -0.45
LINC00517-201ENST00000553396 ARHGEF6Q15052 776 aa12.23□□□□□ -0.45
LINC00517-201ENST00000553396 ZMYM1Q5SVZ6 1142 aa12.23□□□□□ -0.45
LINC00517-201ENST00000553396 CLEC10AQ8IUN9 316 aa12.23□□□□□ -0.45
LINC00517-201ENST00000553396 ANKRD13CQ8N6S4 541 aa12.23□□□□□ -0.45
LINC00517-201ENST00000553396 ACER1Q8TDN7 264 aa12.23□□□□□ -0.45
LINC00517-201ENST00000553396 EVI5LQ96CN4 794 aa12.23□□□□□ -0.45
LINC00517-201ENST00000553396 TRIM47Q96LD4 638 aa12.23□□□□□ -0.45
LINC00517-201ENST00000553396 ASCC2Q9H1I8 757 aaPredicted RBP12.23□□□□□ -0.45
LINC00517-201ENST00000553396 PTCH2Q9Y6C5 1203 aa12.23□□□□□ -0.45
LINC00517-201ENST00000553396 KIAA0100Q14667 2235 aaKnown RBP12.23□□□□□ -0.45
LINC00517-201ENST00000553396 HTTP42858 3142 aa12.22□□□□□ -0.45
LINC00517-201ENST00000553396 MINDY4BA8MYZ0 360 aa12.22□□□□□ -0.45
LINC00517-201ENST00000553396 TRIM6-TRIM34B2RNG4 842 aa12.22□□□□□ -0.45
LINC00517-201ENST00000553396 FMNL1O95466 1100 aaPredicted RBP12.22□□□□□ -0.45
LINC00517-201ENST00000553396 GNAT2P19087 354 aa12.22□□□□□ -0.45
LINC00517-201ENST00000553396 OSBPP22059 807 aa12.22□□□□□ -0.45
LINC00517-201ENST00000553396 IRX3P78415 501 aaPredicted RBP12.22□□□□□ -0.45
LINC00517-201ENST00000553396 USP17L2Q6R6M4 530 aa12.22□□□□□ -0.45
LINC00517-201ENST00000553396 CCDC129Q6ZRS4 1044 aa12.22□□□□□ -0.45
LINC00517-201ENST00000553396 C16orf86Q6ZW13 317 aa12.22□□□□□ -0.45
LINC00517-201ENST00000553396 PLEKHM2Q8IWE5 1019 aa12.22□□□□□ -0.45
LINC00517-201ENST00000553396 RILPL2Q969X0 211 aa12.22□□□□□ -0.45
LINC00517-201ENST00000553396 EMILIN3Q9NT22 766 aa12.22□□□□□ -0.45
LINC00517-201ENST00000553396 CENPFP49454 3210 aa12.21□□□□□ -0.45
LINC00517-201ENST00000553396 FCGRTP55899 365 aa12.21□□□□□ -0.45
LINC00517-201ENST00000553396 GIMAP6Q6P9H5 292 aa12.21□□□□□ -0.45
LINC00517-201ENST00000553396 TMEM179Q6ZVK1 233 aa12.21□□□□□ -0.45
LINC00517-201ENST00000553396 GREB1LQ9C091 1923 aaPredicted RBP12.21□□□□□ -0.46
LINC00517-201ENST00000553396 MYPNQ86TC9 1320 aa12.2□□□□□ -0.46
LINC00517-201ENST00000553396 A0A0D9SFI3 127 aa12.2□□□□□ -0.46
LINC00517-201ENST00000553396 A0A1W2PRG0 241 aa12.2□□□□□ -0.46
LINC00517-201ENST00000553396 PATL2C9JE40 543 aaKnown RBP12.2□□□□□ -0.46
LINC00517-201ENST00000553396 PEX10O60683 326 aa12.2□□□□□ -0.46
LINC00517-201ENST00000553396 GNRH1P01148 92 aa12.2□□□□□ -0.46
LINC00517-201ENST00000553396 HOXA7P31268 230 aaPredicted RBP12.2□□□□□ -0.46
LINC00517-201ENST00000553396 USP14P54578 494 aa12.2□□□□□ -0.46
LINC00517-201ENST00000553396 ICA1Q05084 483 aa12.2□□□□□ -0.46
LINC00517-201ENST00000553396 FAM110CQ1W6H9 321 aa12.2□□□□□ -0.46
LINC00517-201ENST00000553396 SBK1Q52WX2 424 aa12.2□□□□□ -0.46
LINC00517-201ENST00000553396 IFNL3Q8IZI9 196 aa12.2□□□□□ -0.46
LINC00517-201ENST00000553396 FAM227BQ96M60 508 aa12.2□□□□□ -0.46
LINC00517-201ENST00000553396 P2RX7Q99572 595 aaKnown RBP12.2□□□□□ -0.46
LINC00517-201ENST00000553396 NACAP1Q9BZK3 213 aa12.2□□□□□ -0.46
LINC00517-201ENST00000553396 KIAA1683Q9H0B3 1180 aa12.2□□□□□ -0.46
LINC00517-201ENST00000553396 SRRDQ9UH36 339 aa12.2□□□□□ -0.46
LINC00517-201ENST00000553396 ROBO3Q96MS0 1386 aa12.19□□□□□ -0.46
LINC00517-201ENST00000553396 MYH4Q9Y623 1939 aa12.19□□□□□ -0.46
LINC00517-201ENST00000553396 TNPO2O14787 897 aaKnown RBP12.19□□□□□ -0.46
LINC00517-201ENST00000553396 PRDM1O75626 825 aa12.19□□□□□ -0.46
LINC00517-201ENST00000553396 MYCP01106 439 aaPredicted RBP12.19□□□□□ -0.46
LINC00517-201ENST00000553396 VCAM1P19320 739 aa12.19□□□□□ -0.46
LINC00517-201ENST00000553396 GCLCP48506 637 aaPredicted RBP12.19□□□□□ -0.46
LINC00517-201ENST00000553396 HERVK_113P62684 666 aa12.19□□□□□ -0.46
LINC00517-201ENST00000553396 ATP2B2Q01814 1243 aa12.19□□□□□ -0.46
LINC00517-201ENST00000553396 PRKCZQ05513 592 aa12.19□□□□□ -0.46
LINC00517-201ENST00000553396 NMIQ13287 307 aaPredicted RBP12.19□□□□□ -0.46
LINC00517-201ENST00000553396 SLC9C1Q4G0N8 1177 aa12.19□□□□□ -0.46
LINC00517-201ENST00000553396 SH3TC2Q8TF17 1288 aa12.19□□□□□ -0.46
LINC00517-201ENST00000553396 C12orf42Q96LP6 360 aa12.19□□□□□ -0.46
LINC00517-201ENST00000553396 CCDC17Q96LX7 622 aa12.19□□□□□ -0.46
LINC00517-201ENST00000553396 NAPBQ9H115 298 aa12.19□□□□□ -0.46
LINC00517-201ENST00000553396 MKNK2Q9HBH9 465 aa12.19□□□□□ -0.46
LINC00517-201ENST00000553396 TAOK2Q9UL54 1235 aa12.19□□□□□ -0.46
LINC00517-201ENST00000553396 USP17L15C9J2P7 530 aa12.18□□□□□ -0.46
LINC00517-201ENST00000553396 USP17L13C9JLJ4 530 aa12.18□□□□□ -0.46
LINC00517-201ENST00000553396 USP17L11C9JVI0 530 aa12.18□□□□□ -0.46
LINC00517-201ENST00000553396 USP17L18D6R9N7 530 aa12.18□□□□□ -0.46
LINC00517-201ENST00000553396 USP17L22D6RA61 530 aa12.18□□□□□ -0.46
LINC00517-201ENST00000553396 USP17L17D6RBQ6 530 aa12.18□□□□□ -0.46
LINC00517-201ENST00000553396 USP17L19D6RCP7 530 aa12.18□□□□□ -0.46
LINC00517-201ENST00000553396 USP17L20D6RJB6 530 aa12.18□□□□□ -0.46
LINC00517-201ENST00000553396 FOXP2O15409 715 aa12.18□□□□□ -0.46
LINC00517-201ENST00000553396 RASA1P20936 1047 aa12.18□□□□□ -0.46
LINC00517-201ENST00000553396 PDE4AP27815 886 aa12.18□□□□□ -0.46
LINC00517-201ENST00000553396 HOXD10P28358 340 aa12.18□□□□□ -0.46
LINC00517-201ENST00000553396 USP17L24Q0WX57 530 aa12.18□□□□□ -0.46
LINC00517-201ENST00000553396 VPS53Q5VIR6 699 aa12.18□□□□□ -0.46
LINC00517-201ENST00000553396 RAET1EQ8TD07 263 aa12.18□□□□□ -0.46
LINC00517-201ENST00000553396 PAGR1Q9BTK6 254 aa12.18□□□□□ -0.46
LINC00517-201ENST00000553396 OSBPL3Q9H4L5 887 aa12.18□□□□□ -0.46
LINC00517-201ENST00000553396 RPAP3Q9H6T3 665 aaPredicted RBP12.18□□□□□ -0.46
LINC00517-201ENST00000553396 ARHGEF10LQ9HCE6 1279 aa12.18□□□□□ -0.46
LINC00517-201ENST00000553396 TXNRD2Q9NNW7 524 aa12.18□□□□□ -0.46
LINC00517-201ENST00000553396 HELLSQ9NRZ9 838 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms