RNA–Protein interactions for RNA: ENST00000552800.2

TMEM116-216, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-216ENST00000552800 ENAHQ8N8S7 591 aaPredicted RBP11.46□□□□□ -0.57
TMEM116-216ENST00000552800 MTMR14Q8NCE2 650 aa11.46□□□□□ -0.57
TMEM116-216ENST00000552800 GMLQ99445 158 aa11.46□□□□□ -0.57
TMEM116-216ENST00000552800 EHD4Q9H223 541 aa11.46□□□□□ -0.57
TMEM116-216ENST00000552800 RBM28Q9NW13 759 aaKnown RBP11.46□□□□□ -0.57
TMEM116-216ENST00000552800 RCOR1Q9UKL0 485 aa11.46□□□□□ -0.57
TMEM116-216ENST00000552800 DAGLAQ9Y4D2 1042 aa11.46□□□□□ -0.57
TMEM116-216ENST00000552800 MYH1P12882 1939 aa11.45□□□□□ -0.58
TMEM116-216ENST00000552800 PLIN4Q96Q06 1357 aa11.45□□□□□ -0.58
TMEM116-216ENST00000552800 LTBP3Q9NS15 1303 aa11.45□□□□□ -0.58
TMEM116-216ENST00000552800 CCDC69A6NI79 296 aa11.45□□□□□ -0.58
TMEM116-216ENST00000552800 EVI5O60447 810 aa11.45□□□□□ -0.58
TMEM116-216ENST00000552800 PRPF40AO75400 957 aaKnown RBP11.45□□□□□ -0.58
TMEM116-216ENST00000552800 WDHD1O75717 1129 aaPredicted RBP11.45□□□□□ -0.58
TMEM116-216ENST00000552800 FMNL1O95466 1100 aaPredicted RBP11.45□□□□□ -0.58
TMEM116-216ENST00000552800 U2AF2P26368 475 aaKnown RBP eCLIP11.45□□□□□ -0.582e-6■■□□□ 11.9
TMEM116-216ENST00000552800 CDC27P30260 824 aa11.45□□□□□ -0.58
TMEM116-216ENST00000552800 METAP2P50579 478 aaKnown RBP eCLIP11.45□□□□□ -0.58
TMEM116-216ENST00000552800 UBE2HP62256 183 aa11.45□□□□□ -0.58
TMEM116-216ENST00000552800 CCT2P78371 535 aaKnown RBP11.45□□□□□ -0.58
TMEM116-216ENST00000552800 OLFM4Q6UX06 510 aa11.45□□□□□ -0.58
TMEM116-216ENST00000552800 SYNE3Q6ZMZ3 975 aa11.45□□□□□ -0.58
TMEM116-216ENST00000552800 USP48Q86UV5 1035 aa11.45□□□□□ -0.58
TMEM116-216ENST00000552800 CRACR2BQ8N4Y2 399 aaPredicted RBP11.45□□□□□ -0.58
TMEM116-216ENST00000552800 FAM184AQ8NB25 1140 aa11.45□□□□□ -0.58
TMEM116-216ENST00000552800 NEDD1Q8NHV4 660 aa11.45□□□□□ -0.58
TMEM116-216ENST00000552800 WASF1Q92558 559 aa11.45□□□□□ -0.58
TMEM116-216ENST00000552800 RNF26Q9BY78 433 aaPredicted RBP11.45□□□□□ -0.58
TMEM116-216ENST00000552800 SENP2Q9HC62 589 aa11.45□□□□□ -0.58
TMEM116-216ENST00000552800 MCM9Q9NXL9 1143 aa11.45□□□□□ -0.58
TMEM116-216ENST00000552800 CFAP45Q9UL16 551 aa11.45□□□□□ -0.58
TMEM116-216ENST00000552800 ECM29Q5VYK3 1845 aa11.44□□□□□ -0.58
TMEM116-216ENST00000552800 TNKSO95271 1327 aa11.44□□□□□ -0.58
TMEM116-216ENST00000552800 FLT1P17948 1338 aa11.44□□□□□ -0.58
TMEM116-216ENST00000552800 GOLGA8BA8MQT2 603 aa11.44□□□□□ -0.58
TMEM116-216ENST00000552800 PRPF3O43395 683 aaKnown RBP11.44□□□□□ -0.58
TMEM116-216ENST00000552800 NUDT7P0C024 238 aa11.44□□□□□ -0.58
TMEM116-216ENST00000552800 USP17L8P0C7I0 530 aa11.44□□□□□ -0.58
TMEM116-216ENST00000552800 USP5P45974 858 aa11.44□□□□□ -0.58
TMEM116-216ENST00000552800 KRT85P78386 507 aa11.44□□□□□ -0.58
TMEM116-216ENST00000552800 FKBP1CQ5VVH2 108 aa11.44□□□□□ -0.58
TMEM116-216ENST00000552800 CDC37L1Q7L3B6 337 aa11.44□□□□□ -0.58
TMEM116-216ENST00000552800 BRAPQ7Z569 592 aa11.44□□□□□ -0.58
TMEM116-216ENST00000552800 TTC6Q86TZ1 520 aa11.44□□□□□ -0.58
TMEM116-216ENST00000552800 AMOTL1Q8IY63 956 aa11.44□□□□□ -0.58
TMEM116-216ENST00000552800 ZNF654Q8IZM8 581 aa11.44□□□□□ -0.58
TMEM116-216ENST00000552800 GPT2Q8TD30 523 aa11.44□□□□□ -0.58
TMEM116-216ENST00000552800 TGFBRAP1Q8WUH2 860 aa11.44□□□□□ -0.58
TMEM116-216ENST00000552800 TEKT1Q969V4 418 aa11.44□□□□□ -0.58
TMEM116-216ENST00000552800 UBAC1Q9BSL1 405 aa11.44□□□□□ -0.58
TMEM116-216ENST00000552800 DHX36Q9H2U1 1008 aaKnown RBP11.44□□□□□ -0.58
TMEM116-216ENST00000552800 NCOA5Q9HCD5 579 aaKnown RBP11.44□□□□□ -0.58
TMEM116-216ENST00000552800 IL17RBQ9NRM6 502 aa11.44□□□□□ -0.58
TMEM116-216ENST00000552800 PIM2Q9P1W9 311 aa11.44□□□□□ -0.58
TMEM116-216ENST00000552800 ORC3Q9UBD5 711 aaPredicted RBP11.44□□□□□ -0.58
TMEM116-216ENST00000552800 SWAP70Q9UH65 585 aa11.44□□□□□ -0.58
TMEM116-216ENST00000552800 TTF2Q9UNY4 1162 aaKnown RBP11.44□□□□□ -0.58
TMEM116-216ENST00000552800 FER1L6Q2WGJ9 1857 aa11.44□□□□□ -0.58
TMEM116-216ENST00000552800 NAV1Q8NEY1 1877 aa11.44□□□□□ -0.58
TMEM116-216ENST00000552800 SMIM22K7EJ46 135 aa11.43□□□□□ -0.58
TMEM116-216ENST00000552800 CPLX1O14810 134 aa11.43□□□□□ -0.58
TMEM116-216ENST00000552800 ECE2O60344 883 aa11.43□□□□□ -0.58
TMEM116-216ENST00000552800 DPEP1P16444 411 aa11.43□□□□□ -0.58
TMEM116-216ENST00000552800 PLCD1P51178 756 aa11.43□□□□□ -0.58
TMEM116-216ENST00000552800 TEX11Q8IYF3 940 aa11.43□□□□□ -0.58
TMEM116-216ENST00000552800 DDX49Q9Y6V7 483 aaKnown RBP11.43□□□□□ -0.58
TMEM116-216ENST00000552800 MYH15Q9Y2K3 1946 aa11.43□□□□□ -0.58
TMEM116-216ENST00000552800 CYP2D7A0A087X1C5 515 aa11.42□□□□□ -0.58
TMEM116-216ENST00000552800 IGKV6D-41A0A0C4DH26 115 aa11.42□□□□□ -0.58
TMEM116-216ENST00000552800 SPDYE16A6NNV3 312 aaPredicted RBP11.42□□□□□ -0.58
TMEM116-216ENST00000552800 YDJCA8MPS7 323 aa11.42□□□□□ -0.58
TMEM116-216ENST00000552800 ENTPD3O75355 529 aa11.42□□□□□ -0.58
TMEM116-216ENST00000552800 DEXIO95424 95 aa11.42□□□□□ -0.58
TMEM116-216ENST00000552800 RASA1P20936 1047 aa11.42□□□□□ -0.58
TMEM116-216ENST00000552800 IARSP41252 1262 aaKnown RBP11.42□□□□□ -0.58
TMEM116-216ENST00000552800 CRKP46108 304 aa11.42□□□□□ -0.58
TMEM116-216ENST00000552800 CDK8P49336 464 aa11.42□□□□□ -0.58
TMEM116-216ENST00000552800 DNM1Q05193 864 aaKnown RBP11.42□□□□□ -0.58
TMEM116-216ENST00000552800 RTN1Q16799 776 aa11.42□□□□□ -0.58
TMEM116-216ENST00000552800 PPP4R3BQ5MIZ7 849 aa11.42□□□□□ -0.58
TMEM116-216ENST00000552800 IFIT1BQ5T764 474 aaKnown RBP11.42□□□□□ -0.58
TMEM116-216ENST00000552800 CDC42EP5Q6NZY7 148 aa11.42□□□□□ -0.58
TMEM116-216ENST00000552800 CATIPQ7Z7H3 387 aa11.42□□□□□ -0.58
TMEM116-216ENST00000552800 FOXP4Q8IVH2 680 aaPredicted RBP11.42□□□□□ -0.58
TMEM116-216ENST00000552800 ZNF444Q8N0Y2 327 aaPredicted RBP11.42□□□□□ -0.58
TMEM116-216ENST00000552800 RTEL1Q9NZ71 1219 aa11.42□□□□□ -0.58
TMEM116-216ENST00000552800 RBM27Q9P2N5 1060 aaKnown RBP11.42□□□□□ -0.58
TMEM116-216ENST00000552800 GREB1LQ9C091 1923 aaPredicted RBP11.42□□□□□ -0.58
TMEM116-216ENST00000552800 ATRNL1Q5VV63 1379 aa11.41□□□□□ -0.58
TMEM116-216ENST00000552800 GOLGA8AA7E2F4 631 aa11.41□□□□□ -0.58
TMEM116-216ENST00000552800 H3BQV1 296 aa11.41□□□□□ -0.58
TMEM116-216ENST00000552800 RANBP6O60518 1105 aaKnown RBP11.41□□□□□ -0.58
TMEM116-216ENST00000552800 LETM1O95202 739 aaPredicted RBP11.41□□□□□ -0.58
TMEM116-216ENST00000552800 CYP2D6P10635 497 aa11.41□□□□□ -0.58
TMEM116-216ENST00000552800 POLD1P28340 1107 aa11.41□□□□□ -0.58
TMEM116-216ENST00000552800 GNAQP50148 359 aa11.41□□□□□ -0.58
TMEM116-216ENST00000552800 TFAP4Q01664 338 aa11.41□□□□□ -0.58
TMEM116-216ENST00000552800 SSRP1Q08945 709 aaKnown RBP11.41□□□□□ -0.58
TMEM116-216ENST00000552800 IFFO2Q5TF58 517 aa11.41□□□□□ -0.58
TMEM116-216ENST00000552800 AGBL3Q8NEM8 1001 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms