RNA–Protein interactions for RNA: ENST00000552739.5

LETMD1-235, Transcript of LETM1 domain containing 1, humanhuman

TSL 2 BASIC

Gene LETMD1, Length 1,713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-235ENST00000552739 BLOC1S2Q6QNY1 142 aa16.92■□□□□ 0.3
LETMD1-235ENST00000552739 MIGA1Q8NAN2 632 aa16.92■□□□□ 0.3
LETMD1-235ENST00000552739 OPTNQ96CV9 577 aa16.92■□□□□ 0.3
LETMD1-235ENST00000552739 PRIMPOLQ96LW4 560 aa16.92■□□□□ 0.3
LETMD1-235ENST00000552739 SCAND2PQ9GZW5 306 aaPredicted RBP16.92■□□□□ 0.3
LETMD1-235ENST00000552739 SPTLC3Q9NUV7 552 aa16.92■□□□□ 0.3
LETMD1-235ENST00000552739 R3HCC1Q9Y3T6 440 aaKnown RBP16.92■□□□□ 0.3
LETMD1-235ENST00000552739 PHIPQ8WWQ0 1821 aa16.92■□□□□ 0.3
LETMD1-235ENST00000552739 FLT1P17948 1338 aa16.91■□□□□ 0.3
LETMD1-235ENST00000552739 TCRBV5S4A2TA0A5A2 114 aa16.91■□□□□ 0.3
LETMD1-235ENST00000552739 FIBPO43427 364 aa16.91■□□□□ 0.3
LETMD1-235ENST00000552739 TM4SF4P48230 202 aa16.91■□□□□ 0.3
LETMD1-235ENST00000552739 MAP3K10Q02779 954 aa16.91■□□□□ 0.3
LETMD1-235ENST00000552739 SREBF2Q12772 1141 aa16.91■□□□□ 0.3
LETMD1-235ENST00000552739 ZKSCAN4Q969J2 545 aaPredicted RBP16.91■□□□□ 0.3
LETMD1-235ENST00000552739 MANSC4A6NHS7 340 aaPredicted RBP16.9■□□□□ 0.3
LETMD1-235ENST00000552739 SPDYE5A6NIY4 337 aa16.9■□□□□ 0.3
LETMD1-235ENST00000552739 CCDC192P0DO97 292 aa16.9■□□□□ 0.3
LETMD1-235ENST00000552739 INPP5BP32019 993 aa16.9■□□□□ 0.3
LETMD1-235ENST00000552739 LBX1P52954 281 aa16.9■□□□□ 0.3
LETMD1-235ENST00000552739 HMGN5P82970 282 aaKnown RBP16.9■□□□□ 0.3
LETMD1-235ENST00000552739 DNM1Q05193 864 aaKnown RBP16.9■□□□□ 0.3
LETMD1-235ENST00000552739 TGFBRAP1Q8WUH2 860 aa16.9■□□□□ 0.3
LETMD1-235ENST00000552739 CNKSR2Q8WXI2 1034 aa16.9■□□□□ 0.3
LETMD1-235ENST00000552739 PRDM10Q9NQV6 1147 aa16.9■□□□□ 0.3
LETMD1-235ENST00000552739 RNF186Q9NXI6 227 aa16.9■□□□□ 0.3
LETMD1-235ENST00000552739 TSKSQ9UJT2 592 aa16.9■□□□□ 0.3
LETMD1-235ENST00000552739 TPCN1Q9ULQ1 816 aa16.9■□□□□ 0.3
LETMD1-235ENST00000552739 ZNF532Q9HCE3 1301 aa16.9■□□□□ 0.3
LETMD1-235ENST00000552739 ADCY5O95622 1261 aa16.9■□□□□ 0.3
LETMD1-235ENST00000552739 NOL9Q5SY16 702 aaKnown RBP16.9■□□□□ 0.3
LETMD1-235ENST00000552739 RIOK1Q9BRS2 568 aaKnown RBP16.9■□□□□ 0.3
LETMD1-235ENST00000552739 PTPRFP10586 1907 aa16.89■□□□□ 0.29
LETMD1-235ENST00000552739 UQCRHLA0A096LP55 91 aa16.89■□□□□ 0.29
LETMD1-235ENST00000552739 PHF20L1A8MW92 1017 aa16.89■□□□□ 0.29
LETMD1-235ENST00000552739 UQCRHP07919 91 aa16.89■□□□□ 0.29
LETMD1-235ENST00000552739 ADD2P35612 726 aa16.89■□□□□ 0.29
LETMD1-235ENST00000552739 LARP1BQ659C4 914 aaKnown RBP16.89■□□□□ 0.29
LETMD1-235ENST00000552739 RBM43Q6ZSC3 357 aaKnown RBP16.89■□□□□ 0.29
LETMD1-235ENST00000552739 MAPKAPK5Q8IW41 473 aa16.89■□□□□ 0.29
LETMD1-235ENST00000552739 FAM227BQ96M60 508 aa16.89■□□□□ 0.29
LETMD1-235ENST00000552739 FSD1Q9BTV5 496 aa16.89■□□□□ 0.29
LETMD1-235ENST00000552739 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.89■□□□□ 0.29
LETMD1-235ENST00000552739 DDX19AQ9NUU7 478 aaKnown RBP16.89■□□□□ 0.29
LETMD1-235ENST00000552739 A0A0D9SFI3 127 aa16.88■□□□□ 0.29
LETMD1-235ENST00000552739 TBC1D12O60347 775 aa16.88■□□□□ 0.29
LETMD1-235ENST00000552739 CAVIN2O95810 425 aa16.88■□□□□ 0.29
LETMD1-235ENST00000552739 CPA1P15085 419 aa16.88■□□□□ 0.29
LETMD1-235ENST00000552739 COL13A1Q5TAT6 717 aaPredicted RBP16.88■□□□□ 0.29
LETMD1-235ENST00000552739 ERO1BQ86YB8 467 aa16.88■□□□□ 0.29
LETMD1-235ENST00000552739 OTUD5Q96G74 571 aa16.88■□□□□ 0.29
LETMD1-235ENST00000552739 DHX36Q9H2U1 1008 aaKnown RBP16.88■□□□□ 0.29
LETMD1-235ENST00000552739 MAGEB6P1A0A0J9YX57 407 aa16.87■□□□□ 0.29
LETMD1-235ENST00000552739 TRPA1O75762 1119 aa16.87■□□□□ 0.29
LETMD1-235ENST00000552739 SLURP2P0DP57 97 aa16.87■□□□□ 0.29
LETMD1-235ENST00000552739 GTF2F1P35269 517 aaKnown RBP eCLIP16.87■□□□□ 0.29
LETMD1-235ENST00000552739 INHBEP58166 350 aa16.87■□□□□ 0.29
LETMD1-235ENST00000552739 U3KPZ7 1027 aaPredicted RBP16.87■□□□□ 0.29
LETMD1-235ENST00000552739 TESPA1A2RU30 521 aaPredicted RBP16.87■□□□□ 0.29
LETMD1-235ENST00000552739 GOLGA6L6A8MZA4 724 aa16.87■□□□□ 0.29
LETMD1-235ENST00000552739 PPIL2Q13356 520 aa16.87■□□□□ 0.29
LETMD1-235ENST00000552739 FOXD4L6Q3SYB3 417 aaPredicted RBP16.87■□□□□ 0.29
LETMD1-235ENST00000552739 FOXD4L3Q6VB84 417 aaPredicted RBP16.87■□□□□ 0.29
LETMD1-235ENST00000552739 FAM200AQ8TCP9 573 aa16.87■□□□□ 0.29
LETMD1-235ENST00000552739 MYH15Q9Y2K3 1946 aa16.86■□□□□ 0.29
LETMD1-235ENST00000552739 VPS37CA5D8V6 355 aaPredicted RBP16.86■□□□□ 0.29
LETMD1-235ENST00000552739 TOB2Q14106 344 aaPredicted RBP16.86■□□□□ 0.29
LETMD1-235ENST00000552739 UBE3CQ15386 1083 aa16.86■□□□□ 0.29
LETMD1-235ENST00000552739 ZSCAN25Q6NSZ9 544 aa16.86■□□□□ 0.29
LETMD1-235ENST00000552739 TTC6Q86TZ1 520 aa16.86■□□□□ 0.29
LETMD1-235ENST00000552739 SCYL3Q8IZE3 742 aa16.86■□□□□ 0.29
LETMD1-235ENST00000552739 KBTBD3Q8NAB2 608 aa16.86■□□□□ 0.29
LETMD1-235ENST00000552739 MYRIPQ8NFW9 859 aa16.86■□□□□ 0.29
LETMD1-235ENST00000552739 MS4A4AQ96JQ5 239 aa16.86■□□□□ 0.29
LETMD1-235ENST00000552739 LLPHQ9BRT6 129 aaKnown RBP16.86■□□□□ 0.29
LETMD1-235ENST00000552739 NUP62CLQ9H1M0 184 aa16.86■□□□□ 0.29
LETMD1-235ENST00000552739 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.86■□□□□ 0.29
LETMD1-235ENST00000552739 HERC5Q9UII4 1024 aaKnown RBP16.86■□□□□ 0.29
LETMD1-235ENST00000552739 CASP8AP2Q9UKL3 1982 aa16.86■□□□□ 0.29
LETMD1-235ENST00000552739 BAZ2AQ9UIF9 1905 aaKnown RBP16.86■□□□□ 0.29
LETMD1-235ENST00000552739 FAM196BA6NMK8 535 aa16.85■□□□□ 0.29
LETMD1-235ENST00000552739 IGF2BP3O00425 579 aaKnown RBP eCLIP16.85■□□□□ 0.29
LETMD1-235ENST00000552739 USP5P45974 858 aa16.85■□□□□ 0.29
LETMD1-235ENST00000552739 PPATQ06203 517 aa16.85■□□□□ 0.29
LETMD1-235ENST00000552739 SLFNL1Q499Z3 407 aa16.85■□□□□ 0.29
LETMD1-235ENST00000552739 METTL16Q86W50 562 aaKnown RBP16.85■□□□□ 0.29
LETMD1-235ENST00000552739 IFNL1Q8IU54 200 aa16.85■□□□□ 0.29
LETMD1-235ENST00000552739 LCORLQ8N3X6 602 aa16.85■□□□□ 0.29
LETMD1-235ENST00000552739 CHMP4CQ96CF2 233 aa16.85■□□□□ 0.29
LETMD1-235ENST00000552739 CFHR5Q9BXR6 569 aa16.85■□□□□ 0.29
LETMD1-235ENST00000552739 PI4KBQ9UBF8 816 aa16.85■□□□□ 0.29
LETMD1-235ENST00000552739 MYH8P13535 1937 aa16.85■□□□□ 0.29
LETMD1-235ENST00000552739 IRF6O14896 467 aa16.84■□□□□ 0.29
LETMD1-235ENST00000552739 CTNND1O60716 968 aaKnown RBP16.84■□□□□ 0.29
LETMD1-235ENST00000552739 CHGBP05060 677 aa16.84■□□□□ 0.29
LETMD1-235ENST00000552739 HMGB1P09429 215 aaKnown RBP16.84■□□□□ 0.29
LETMD1-235ENST00000552739 GTF2A2P52657 109 aa16.84■□□□□ 0.29
LETMD1-235ENST00000552739 NOLC1Q14978 699 aaKnown RBP eCLIP16.84■□□□□ 0.298e-7■■■□□ 17.6
LETMD1-235ENST00000552739 GTF3C6Q969F1 213 aa16.84■□□□□ 0.29
LETMD1-235ENST00000552739 CRNKL1Q9BZJ0 848 aaKnown RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms