RNA–Protein interactions for RNA: ENST00000552003.1

SLC48A1-209, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 882 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-209ENST00000552003 ZNF384Q8TF68 577 aa12.85□□□□□ -0.35
SLC48A1-209ENST00000552003 NKX2-4Q9H2Z4 354 aa12.85□□□□□ -0.35
SLC48A1-209ENST00000552003 SPTBN4Q9H254 2564 aa12.85□□□□□ -0.35
SLC48A1-209ENST00000552003 SLC15A5A6NIM6 579 aa12.84□□□□□ -0.35
SLC48A1-209ENST00000552003 PI4K2BG5E9Z4 385 aa12.84□□□□□ -0.35
SLC48A1-209ENST00000552003 PQBP1O60828 265 aaKnown RBP12.84□□□□□ -0.35
SLC48A1-209ENST00000552003 NBPF7P0C2Y1 421 aaPredicted RBP12.84□□□□□ -0.35
SLC48A1-209ENST00000552003 GRB14Q14449 540 aa12.84□□□□□ -0.35
SLC48A1-209ENST00000552003 FAM47AQ5JRC9 791 aa12.84□□□□□ -0.35
SLC48A1-209ENST00000552003 MICALL1Q8N3F8 863 aa12.84□□□□□ -0.35
SLC48A1-209ENST00000552003 RNF39Q9H2S5 420 aa12.84□□□□□ -0.35
SLC48A1-209ENST00000552003 EMILIN3Q9NT22 766 aa12.84□□□□□ -0.35
SLC48A1-209ENST00000552003 PHF24Q9UPV7 400 aa12.84□□□□□ -0.35
SLC48A1-209ENST00000552003 SALL1Q9NSC2 1324 aa12.84□□□□□ -0.35
SLC48A1-209ENST00000552003 ACRP10323 421 aa12.83□□□□□ -0.36
SLC48A1-209ENST00000552003 BTDP43251 543 aa12.83□□□□□ -0.36
SLC48A1-209ENST00000552003 PUM3Q15397 648 aaKnown RBP12.83□□□□□ -0.36
SLC48A1-209ENST00000552003 RABL6Q3YEC7 729 aaPredicted RBP12.83□□□□□ -0.36
SLC48A1-209ENST00000552003 ANKS1AQ92625 1134 aa12.83□□□□□ -0.36
SLC48A1-209ENST00000552003 TBC1D2Q9BYX2 928 aa12.83□□□□□ -0.36
SLC48A1-209ENST00000552003 BICC1Q9H694 974 aaKnown RBP12.83□□□□□ -0.36
SLC48A1-209ENST00000552003 TMEM39AQ9NV64 488 aa12.83□□□□□ -0.36
SLC48A1-209ENST00000552003 BTBD7Q9P203 1132 aa12.83□□□□□ -0.36
SLC48A1-209ENST00000552003 RFXAPO00287 272 aa12.82□□□□□ -0.36
SLC48A1-209ENST00000552003 SEPT4O43236 478 aa12.82□□□□□ -0.36
SLC48A1-209ENST00000552003 IFIT1P09914 478 aaKnown RBP12.82□□□□□ -0.36
SLC48A1-209ENST00000552003 CALD1Q05682 793 aaKnown RBP12.82□□□□□ -0.36
SLC48A1-209ENST00000552003 KRT40Q6A162 431 aa12.82□□□□□ -0.36
SLC48A1-209ENST00000552003 CCAR1Q8IX12 1150 aaKnown RBP12.82□□□□□ -0.36
SLC48A1-209ENST00000552003 FAM163AQ96GL9 167 aaPredicted RBP12.82□□□□□ -0.36
SLC48A1-209ENST00000552003 PHOX2BQ99453 314 aa12.82□□□□□ -0.36
SLC48A1-209ENST00000552003 DNAJC18Q9H819 358 aa12.82□□□□□ -0.36
SLC48A1-209ENST00000552003 TMOD4Q9NZQ9 345 aa12.82□□□□□ -0.36
SLC48A1-209ENST00000552003 COBLO75128 1261 aa12.81□□□□□ -0.36
SLC48A1-209ENST00000552003 TIMP1P01033 207 aa12.81□□□□□ -0.36
SLC48A1-209ENST00000552003 MYOGP15173 224 aa12.81□□□□□ -0.36
SLC48A1-209ENST00000552003 WDR43Q15061 677 aaKnown RBP eCLIP12.81□□□□□ -0.36
SLC48A1-209ENST00000552003 WDR78Q5VTH9 848 aa12.81□□□□□ -0.36
SLC48A1-209ENST00000552003 ZNF365Q70YC5 407 aa12.81□□□□□ -0.36
SLC48A1-209ENST00000552003 SLC44A5Q8NCS7 719 aa12.81□□□□□ -0.36
SLC48A1-209ENST00000552003 FBXL18Q96ME1 805 aa12.81□□□□□ -0.36
SLC48A1-209ENST00000552003 AS3MTQ9HBK9 375 aa12.81□□□□□ -0.36
SLC48A1-209ENST00000552003 C9orf78Q9NZ63 289 aaPredicted RBP12.81□□□□□ -0.36
SLC48A1-209ENST00000552003 TBX21Q9UL17 535 aa12.81□□□□□ -0.36
SLC48A1-209ENST00000552003 RABGAP1Q9Y3P9 1069 aa12.81□□□□□ -0.36
SLC48A1-209ENST00000552003 TRIOO75962 3097 aa12.8□□□□□ -0.36
SLC48A1-209ENST00000552003 A0A1W2PQ45 241 aaPredicted RBP12.8□□□□□ -0.36
SLC48A1-209ENST00000552003 A0A1W2PQY0 241 aa12.8□□□□□ -0.36
SLC48A1-209ENST00000552003 PRR33A8MZF0 331 aa12.8□□□□□ -0.36
SLC48A1-209ENST00000552003 CSF2RAP15509 400 aa12.8□□□□□ -0.36
SLC48A1-209ENST00000552003 PHKA1P46020 1223 aa12.8□□□□□ -0.36
SLC48A1-209ENST00000552003 RALBP1Q15311 655 aa12.8□□□□□ -0.36
SLC48A1-209ENST00000552003 AAK1Q2M2I8 961 aa12.8□□□□□ -0.36
SLC48A1-209ENST00000552003 MFSD5Q6N075 450 aa12.8□□□□□ -0.36
SLC48A1-209ENST00000552003 ANKRD33Q7Z3H0 272 aa12.8□□□□□ -0.36
SLC48A1-209ENST00000552003 LPIN2Q92539 896 aa12.8□□□□□ -0.36
SLC48A1-209ENST00000552003 TSPYL2Q9H2G4 693 aaPredicted RBP12.8□□□□□ -0.36
SLC48A1-209ENST00000552003 MTCH2Q9Y6C9 303 aa12.8□□□□□ -0.36
SLC48A1-209ENST00000552003 ZNF236Q9UL36 1845 aa12.79□□□□□ -0.36
SLC48A1-209ENST00000552003 GPR75-ASB3A0A0A6YYF3 556 aa12.79□□□□□ -0.36
SLC48A1-209ENST00000552003 EPOPA6NHQ4 379 aa12.79□□□□□ -0.36
SLC48A1-209ENST00000552003 C19orf81C9J6K1 198 aa12.79□□□□□ -0.36
SLC48A1-209ENST00000552003 VAMP4O75379 141 aa12.79□□□□□ -0.36
SLC48A1-209ENST00000552003 PGK1P00558 417 aa12.79□□□□□ -0.36
SLC48A1-209ENST00000552003 RFX5P48382 616 aaPredicted RBP12.79□□□□□ -0.36
SLC48A1-209ENST00000552003 RABGGTBP53611 331 aa12.79□□□□□ -0.36
SLC48A1-209ENST00000552003 SKIV2LQ15477 1246 aaKnown RBP12.79□□□□□ -0.36
SLC48A1-209ENST00000552003 OLFML2BQ68BL8 750 aa12.79□□□□□ -0.36
SLC48A1-209ENST00000552003 HERVK_113Q902F9 699 aa12.79□□□□□ -0.36
SLC48A1-209ENST00000552003 MROH7-TTC4A0A0A0MT08 1334 aa12.79□□□□□ -0.36
SLC48A1-209ENST00000552003 ZNF316A6NFI3 1004 aaPredicted RBP12.78□□□□□ -0.36
SLC48A1-209ENST00000552003 USP17L10C9JJH3 530 aa12.78□□□□□ -0.36
SLC48A1-209ENST00000552003 GDF11O95390 407 aa12.78□□□□□ -0.36
SLC48A1-209ENST00000552003 SLC5A1P13866 664 aa12.78□□□□□ -0.36
SLC48A1-209ENST00000552003 ADORA2AP29274 412 aa12.78□□□□□ -0.36
SLC48A1-209ENST00000552003 ATG9AQ7Z3C6 839 aa12.78□□□□□ -0.36
SLC48A1-209ENST00000552003 GTF3C2Q8WUA4 911 aaPredicted RBP12.78□□□□□ -0.36
SLC48A1-209ENST00000552003 LENG1Q96BZ8 264 aaPredicted RBP12.78□□□□□ -0.36
SLC48A1-209ENST00000552003 TOX2Q96NM4 488 aa12.78□□□□□ -0.36
SLC48A1-209ENST00000552003 SLC28A3Q9HAS3 691 aa12.78□□□□□ -0.36
SLC48A1-209ENST00000552003 CWC22Q9HCG8 908 aaKnown RBP12.78□□□□□ -0.36
SLC48A1-209ENST00000552003 MSRAQ9UJ68 235 aa12.78□□□□□ -0.36
SLC48A1-209ENST00000552003 ZNFX1Q9P2E3 1918 aaKnown RBP12.78□□□□□ -0.36
SLC48A1-209ENST00000552003 C5orf42Q9H799 3197 aa12.77□□□□□ -0.37
SLC48A1-209ENST00000552003 ALDH1L1O75891 902 aa12.77□□□□□ -0.37
SLC48A1-209ENST00000552003 GLRX3O76003 335 aaKnown RBP12.77□□□□□ -0.37
SLC48A1-209ENST00000552003 POU3F3P20264 500 aaPredicted RBP12.77□□□□□ -0.37
SLC48A1-209ENST00000552003 RAB30Q15771 203 aa12.77□□□□□ -0.37
SLC48A1-209ENST00000552003 DCHS1Q96JQ0 3298 aa12.77□□□□□ -0.37
SLC48A1-209ENST00000552003 ASNSP08243 561 aa12.76□□□□□ -0.37
SLC48A1-209ENST00000552003 TAL1P17542 331 aaPredicted RBP12.76□□□□□ -0.37
SLC48A1-209ENST00000552003 ADORA1P30542 326 aa12.76□□□□□ -0.37
SLC48A1-209ENST00000552003 IRX5P78411 483 aaPredicted RBP12.76□□□□□ -0.37
SLC48A1-209ENST00000552003 MECOMQ03112 1051 aa12.76□□□□□ -0.37
SLC48A1-209ENST00000552003 PPIGQ13427 754 aaKnown RBP eCLIP12.76□□□□□ -0.37
SLC48A1-209ENST00000552003 CATSPERGQ6ZRH7 1159 aa12.76□□□□□ -0.37
SLC48A1-209ENST00000552003 VWCEQ96DN2 955 aa12.76□□□□□ -0.37
SLC48A1-209ENST00000552003 XPNPEP3Q9NQH7 507 aa12.76□□□□□ -0.37
SLC48A1-209ENST00000552003 ZBTB21Q9ULJ3 1066 aa12.76□□□□□ -0.37
SLC48A1-209ENST00000552003 SPDYE16A6NNV3 312 aaPredicted RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms