RNA–Protein interactions for RNA: ENST00000551551.1

ATXN2-223, Transcript of ataxin 2, human

TSL 2

Gene ATXN2, Length 1,256 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN2-223	ENST00000551551	HMGCS2	P54868	508 aa		10.82	□□□□□ -0.68
ATXN2-223	ENST00000551551	GABPA	Q06546	454 aa		10.82	□□□□□ -0.68
ATXN2-223	ENST00000551551	RAB3GAP1	Q15042	981 aa		10.82	□□□□□ -0.68
ATXN2-223	ENST00000551551	SLC4A8	Q2Y0W8	1093 aa		10.82	□□□□□ -0.68
ATXN2-223	ENST00000551551	ANKRD45	Q5TZF3	282 aa		10.82	□□□□□ -0.68
ATXN2-223	ENST00000551551	C12orf60	Q5U649	245 aa		10.82	□□□□□ -0.68
ATXN2-223	ENST00000551551	SOCS4	Q8WXH5	440 aa		10.82	□□□□□ -0.68
ATXN2-223	ENST00000551551	ASCC2	Q9H1I8	757 aa	Predicted RBP	10.82	□□□□□ -0.68
ATXN2-223	ENST00000551551	SLC5A4	Q9NY91	659 aa		10.82	□□□□□ -0.68
ATXN2-223	ENST00000551551	STAP2	Q9UGK3	403 aa		10.82	□□□□□ -0.68
ATXN2-223	ENST00000551551	SAP30BP	Q9UHR5	308 aa	Known RBP	10.82	□□□□□ -0.68
ATXN2-223	ENST00000551551	CPA4	Q9UI42	421 aa		10.82	□□□□□ -0.68
ATXN2-223	ENST00000551551	RABGAP1	Q9Y3P9	1069 aa		10.82	□□□□□ -0.68
ATXN2-223	ENST00000551551	SLC4A4	Q9Y6R1	1079 aa		10.82	□□□□□ -0.68
ATXN2-223	ENST00000551551	HIP1	O00291	1037 aa		10.81	□□□□□ -0.68
ATXN2-223	ENST00000551551	STRN	O43815	780 aa		10.81	□□□□□ -0.68
ATXN2-223	ENST00000551551	MBD4	O95243	580 aa		10.81	□□□□□ -0.68
ATXN2-223	ENST00000551551	GH2	P01242	217 aa		10.81	□□□□□ -0.68
ATXN2-223	ENST00000551551	PC	P11498	1178 aa	Known RBP	10.81	□□□□□ -0.68
ATXN2-223	ENST00000551551	XRCC5	P13010	732 aa	Known RBP	10.81	□□□□□ -0.68
ATXN2-223	ENST00000551551	GRK4	P32298	578 aa		10.81	□□□□□ -0.68
ATXN2-223	ENST00000551551	PDE4B	Q07343	736 aa		10.81	□□□□□ -0.68
ATXN2-223	ENST00000551551	MTMR2	Q13614	643 aa		10.81	□□□□□ -0.68
ATXN2-223	ENST00000551551	COG2	Q14746	738 aa		10.81	□□□□□ -0.68
ATXN2-223	ENST00000551551	LBX2	Q6XYB7	198 aa		10.81	□□□□□ -0.68
ATXN2-223	ENST00000551551	ZNF444	Q8N0Y2	327 aa	Predicted RBP	10.81	□□□□□ -0.68
ATXN2-223	ENST00000551551	STRBP	Q96SI9	672 aa	Known RBP	10.81	□□□□□ -0.68
ATXN2-223	ENST00000551551	BCL11A	Q9H165	835 aa		10.81	□□□□□ -0.68
ATXN2-223	ENST00000551551	MKNK2	Q9HBH9	465 aa		10.81	□□□□□ -0.68
ATXN2-223	ENST00000551551	MORF4L1	Q9UBU8	362 aa		10.81	□□□□□ -0.68
ATXN2-223	ENST00000551551	BIN2	Q9UBW5	565 aa	Predicted RBP	10.81	□□□□□ -0.68
ATXN2-223	ENST00000551551	PCDHB15	Q9Y5E8	787 aa		10.81	□□□□□ -0.68
ATXN2-223	ENST00000551551	MYPN	Q86TC9	1320 aa		10.81	□□□□□ -0.68
ATXN2-223	ENST00000551551	MAST2	Q6P0Q8	1798 aa		10.8	□□□□□ -0.68
ATXN2-223	ENST00000551551	DOCK2	Q92608	1830 aa		10.8	□□□□□ -0.68
ATXN2-223	ENST00000551551	USP17L12	C9JPN9	530 aa		10.8	□□□□□ -0.68
ATXN2-223	ENST00000551551	USP17L21	D6R901	530 aa		10.8	□□□□□ -0.68
ATXN2-223	ENST00000551551	MPHOSPH10	O00566	681 aa	Known RBP	10.8	□□□□□ -0.68
ATXN2-223	ENST00000551551	APP	P05067	770 aa		10.8	□□□□□ -0.68
ATXN2-223	ENST00000551551	FDX1	P10109	184 aa		10.8	□□□□□ -0.68
ATXN2-223	ENST00000551551	CYP2C8	P10632	490 aa		10.8	□□□□□ -0.68
ATXN2-223	ENST00000551551	COPB2	P35606	906 aa		10.8	□□□□□ -0.68
ATXN2-223	ENST00000551551	PLCD1	P51178	756 aa		10.8	□□□□□ -0.68
ATXN2-223	ENST00000551551	ANKRD13C	Q8N6S4	541 aa		10.8	□□□□□ -0.68
ATXN2-223	ENST00000551551	ZNF333	Q96JL9	665 aa		10.8	□□□□□ -0.68
ATXN2-223	ENST00000551551	CWC22	Q9HCG8	908 aa	Known RBP	10.8	□□□□□ -0.68
ATXN2-223	ENST00000551551	GOPC	Q9HD26	462 aa		10.8	□□□□□ -0.68
ATXN2-223	ENST00000551551	SSUH2	Q9Y2M2	353 aa		10.8	□□□□□ -0.68
ATXN2-223	ENST00000551551	ADGRA2	Q96PE1	1338 aa		10.8	□□□□□ -0.68
ATXN2-223	ENST00000551551	SMARCA5	O60264	1052 aa	Predicted RBP	10.79	□□□□□ -0.68
ATXN2-223	ENST00000551551	SHMT1	P34896	483 aa		10.79	□□□□□ -0.68
ATXN2-223	ENST00000551551	HERVK_113	P62684	666 aa		10.79	□□□□□ -0.68
ATXN2-223	ENST00000551551	CATSPERG	Q6ZRH7	1159 aa		10.79	□□□□□ -0.68
ATXN2-223	ENST00000551551	C16orf86	Q6ZW13	317 aa		10.79	□□□□□ -0.68
ATXN2-223	ENST00000551551	SMC5	Q8IY18	1101 aa		10.79	□□□□□ -0.68
ATXN2-223	ENST00000551551	LCORL	Q8N3X6	602 aa		10.79	□□□□□ -0.68
ATXN2-223	ENST00000551551	YTHDC1	Q96MU7	727 aa	Known RBP	10.79	□□□□□ -0.68
ATXN2-223	ENST00000551551	NUDT12	Q9BQG2	462 aa		10.79	□□□□□ -0.68
ATXN2-223	ENST00000551551	FSD1	Q9BTV5	496 aa		10.79	□□□□□ -0.68
ATXN2-223	ENST00000551551	ARMT1	Q9H993	441 aa		10.79	□□□□□ -0.68
ATXN2-223	ENST00000551551	HELLS	Q9NRZ9	838 aa		10.79	□□□□□ -0.68
ATXN2-223	ENST00000551551	NDUFB9	Q9Y6M9	179 aa		10.79	□□□□□ -0.68
ATXN2-223	ENST00000551551	IVNS1ABP	Q9Y6Y0	642 aa		10.79	□□□□□ -0.68
ATXN2-223	ENST00000551551	OTOF	Q9HC10	1997 aa		10.78	□□□□□ -0.68
ATXN2-223	ENST00000551551	FAM196B	A6NMK8	535 aa		10.78	□□□□□ -0.68
ATXN2-223	ENST00000551551	GJB1	P08034	283 aa		10.78	□□□□□ -0.68
ATXN2-223	ENST00000551551	TDO2	P48775	406 aa		10.78	□□□□□ -0.68
ATXN2-223	ENST00000551551	CDK8	P49336	464 aa		10.78	□□□□□ -0.68
ATXN2-223	ENST00000551551	CTR9	Q6PD62	1173 aa		10.78	□□□□□ -0.68
ATXN2-223	ENST00000551551	SDR42E1	Q8WUS8	393 aa		10.78	□□□□□ -0.68
ATXN2-223	ENST00000551551	CRBN	Q96SW2	442 aa		10.78	□□□□□ -0.68
ATXN2-223	ENST00000551551	OSBPL3	Q9H4L5	887 aa		10.78	□□□□□ -0.68
ATXN2-223	ENST00000551551	DNAJC18	Q9H819	358 aa		10.78	□□□□□ -0.68
ATXN2-223	ENST00000551551	EMILIN3	Q9NT22	766 aa		10.78	□□□□□ -0.68
ATXN2-223	ENST00000551551	PNMA2	Q9UL42	364 aa		10.78	□□□□□ -0.68
ATXN2-223	ENST00000551551	TMX2	Q9Y320	296 aa		10.78	□□□□□ -0.68
ATXN2-223	ENST00000551551	PTCH2	Q9Y6C5	1203 aa		10.78	□□□□□ -0.68
ATXN2-223	ENST00000551551	DOCK1	Q14185	1865 aa		10.77	□□□□□ -0.69
ATXN2-223	ENST00000551551	WDR46	O15213	610 aa	Known RBP	10.77	□□□□□ -0.69
ATXN2-223	ENST00000551551	GPAA1	O43292	621 aa		10.77	□□□□□ -0.69
ATXN2-223	ENST00000551551	ADCY3	O60266	1144 aa		10.77	□□□□□ -0.69
ATXN2-223	ENST00000551551	GDF11	O95390	407 aa		10.77	□□□□□ -0.69
ATXN2-223	ENST00000551551	SLC25A27	O95847	323 aa		10.77	□□□□□ -0.69
ATXN2-223	ENST00000551551	FLT3LG	P49771	235 aa		10.77	□□□□□ -0.69
ATXN2-223	ENST00000551551	PDE1A	P54750	535 aa		10.77	□□□□□ -0.69
ATXN2-223	ENST00000551551	TREML2	Q5T2D2	321 aa		10.77	□□□□□ -0.69
ATXN2-223	ENST00000551551	P2RX7	Q99572	595 aa	Known RBP	10.77	□□□□□ -0.69
ATXN2-223	ENST00000551551	PUS7L	Q9H0K6	701 aa	Known RBP	10.77	□□□□□ -0.69
ATXN2-223	ENST00000551551	NAPB	Q9H115	298 aa		10.77	□□□□□ -0.69
ATXN2-223	ENST00000551551	MROH8	Q9H579	483 aa		10.77	□□□□□ -0.69
ATXN2-223	ENST00000551551	NYAP2	Q9P242	653 aa		10.77	□□□□□ -0.69
ATXN2-223	ENST00000551551	RGS2	P41220	211 aa		10.76	□□□□□ -0.69
ATXN2-223	ENST00000551551	ERVK-9	P63128	1117 aa		10.76	□□□□□ -0.69
ATXN2-223	ENST00000551551	ERVK-24	P63145	666 aa		10.76	□□□□□ -0.69
ATXN2-223	ENST00000551551	ICA1	Q05084	483 aa		10.76	□□□□□ -0.69
ATXN2-223	ENST00000551551	SEPT2	Q15019	361 aa		10.76	□□□□□ -0.69
ATXN2-223	ENST00000551551	ALX1	Q15699	326 aa		10.76	□□□□□ -0.69
ATXN2-223	ENST00000551551	MCMDC2	Q4G0Z9	681 aa		10.76	□□□□□ -0.69
ATXN2-223	ENST00000551551	CCDC178	Q5BJE1	867 aa		10.76	□□□□□ -0.69
ATXN2-223	ENST00000551551	ZMYM1	Q5SVZ6	1142 aa		10.76	□□□□□ -0.69

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