RNA–Protein interactions for RNA: ENST00000550828.1

ERBB3-215, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-215ENST00000550828 NCOA7Q8NI08 942 aa15.95■□□□□ 0.14
ERBB3-215ENST00000550828 CEP95Q96GE4 821 aa15.95■□□□□ 0.14
ERBB3-215ENST00000550828 NEK1Q96PY6 1258 aa15.95■□□□□ 0.14
ERBB3-215ENST00000550828 ZKSCAN3Q9BRR0 538 aa15.95■□□□□ 0.14
ERBB3-215ENST00000550828 KRT23Q9C075 422 aa15.95■□□□□ 0.14
ERBB3-215ENST00000550828 CNNM2Q9H8M5 875 aa15.95■□□□□ 0.14
ERBB3-215ENST00000550828 SENP2Q9HC62 589 aa15.95■□□□□ 0.14
ERBB3-215ENST00000550828 TLL2Q9Y6L7 1015 aa15.95■□□□□ 0.14
ERBB3-215ENST00000550828 TSPY2A6NKD2 308 aa15.94■□□□□ 0.14
ERBB3-215ENST00000550828 MPHOSPH10O00566 681 aaKnown RBP15.94■□□□□ 0.14
ERBB3-215ENST00000550828 PTPRAP18433 802 aa15.94■□□□□ 0.14
ERBB3-215ENST00000550828 NOVP48745 357 aa15.94■□□□□ 0.14
ERBB3-215ENST00000550828 RGS19P49795 217 aa15.94■□□□□ 0.14
ERBB3-215ENST00000550828 EXOSC10Q01780 885 aaKnown RBP15.94■□□□□ 0.14
ERBB3-215ENST00000550828 KRT32Q14532 448 aa15.94■□□□□ 0.14
ERBB3-215ENST00000550828 TMEM179Q6ZVK1 233 aa15.94■□□□□ 0.14
ERBB3-215ENST00000550828 SAPCD2Q86UD0 394 aa15.94■□□□□ 0.14
ERBB3-215ENST00000550828 ANKRD13AQ8IZ07 590 aa15.94■□□□□ 0.14
ERBB3-215ENST00000550828 ESR2Q92731 530 aa15.94■□□□□ 0.14
ERBB3-215ENST00000550828 LRRC2Q9BYS8 371 aa15.94■□□□□ 0.14
ERBB3-215ENST00000550828 UPF3BQ9BZI7 483 aaKnown RBP15.94■□□□□ 0.14
ERBB3-215ENST00000550828 ELP3Q9H9T3 547 aa15.94■□□□□ 0.14
ERBB3-215ENST00000550828 ZNF287Q9HBT7 754 aa15.94■□□□□ 0.14
ERBB3-215ENST00000550828 ZSWIM6Q9HCJ5 1215 aa15.94■□□□□ 0.14
ERBB3-215ENST00000550828 RLFQ13129 1914 aa15.94■□□□□ 0.14
ERBB3-215ENST00000550828 A0A1W2PRG0 241 aa15.93■□□□□ 0.14
ERBB3-215ENST00000550828 PRC1O43663 620 aa15.93■□□□□ 0.14
ERBB3-215ENST00000550828 ASNSP08243 561 aa15.93■□□□□ 0.14
ERBB3-215ENST00000550828 TSPY3P0CV98 308 aa15.93■□□□□ 0.14
ERBB3-215ENST00000550828 TSPY8P0CW00 308 aa15.93■□□□□ 0.14
ERBB3-215ENST00000550828 CASTP20810 708 aaKnown RBP15.93■□□□□ 0.14
ERBB3-215ENST00000550828 HUNKP57058 714 aa15.93■□□□□ 0.14
ERBB3-215ENST00000550828 SEC23AQ15436 765 aa15.93■□□□□ 0.14
ERBB3-215ENST00000550828 RALYLQ86SE5 291 aaKnown RBP15.93■□□□□ 0.14
ERBB3-215ENST00000550828 ACER1Q8TDN7 264 aa15.93■□□□□ 0.14
ERBB3-215ENST00000550828 TM6SF1Q9BZW5 370 aa15.93■□□□□ 0.14
ERBB3-215ENST00000550828 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.93■□□□□ 0.14
ERBB3-215ENST00000550828 SPDYE5A6NIY4 337 aa15.92■□□□□ 0.14
ERBB3-215ENST00000550828 CCDC85CA6NKD9 419 aa15.92■□□□□ 0.14
ERBB3-215ENST00000550828 RPS6KB1P23443 525 aa15.92■□□□□ 0.14
ERBB3-215ENST00000550828 TRDNQ13061 729 aa15.92■□□□□ 0.14
ERBB3-215ENST00000550828 RAB3GAP1Q15042 981 aa15.92■□□□□ 0.14
ERBB3-215ENST00000550828 ENAHQ8N8S7 591 aaPredicted RBP15.92■□□□□ 0.14
ERBB3-215ENST00000550828 IGDCC4Q8TDY8 1250 aa15.92■□□□□ 0.14
ERBB3-215ENST00000550828 GINM1Q9NU53 330 aa15.92■□□□□ 0.14
ERBB3-215ENST00000550828 TCP11L1Q9NUJ3 509 aa15.92■□□□□ 0.14
ERBB3-215ENST00000550828 MTMR4Q9NYA4 1195 aa15.92■□□□□ 0.14
ERBB3-215ENST00000550828 CSADQ9Y600 493 aa15.92■□□□□ 0.14
ERBB3-215ENST00000550828 TNKSO95271 1327 aa15.92■□□□□ 0.14
ERBB3-215ENST00000550828 SH2B2O14492 632 aaPredicted RBP15.91■□□□□ 0.14
ERBB3-215ENST00000550828 EEF2P13639 858 aaKnown RBP15.91■□□□□ 0.14
ERBB3-215ENST00000550828 ICA1Q05084 483 aa15.91■□□□□ 0.14
ERBB3-215ENST00000550828 DGKZQ13574 1117 aa15.91■□□□□ 0.14
ERBB3-215ENST00000550828 KIAA1755Q5JYT7 1200 aa15.91■□□□□ 0.14
ERBB3-215ENST00000550828 BLOC1S2Q6QNY1 142 aa15.91■□□□□ 0.14
ERBB3-215ENST00000550828 DHX32Q7L7V1 743 aaKnown RBP15.91■□□□□ 0.14
ERBB3-215ENST00000550828 RASGRP2Q7LDG7 609 aa15.91■□□□□ 0.14
ERBB3-215ENST00000550828 RASAL3Q86YV0 1011 aa15.91■□□□□ 0.14
ERBB3-215ENST00000550828 CAPNS2Q96L46 248 aa15.91■□□□□ 0.14
ERBB3-215ENST00000550828 TTC14Q96N46 770 aa15.91■□□□□ 0.14
ERBB3-215ENST00000550828 ZSCAN10Q96SZ4 725 aaPredicted RBP15.91■□□□□ 0.14
ERBB3-215ENST00000550828 UPF2Q9HAU5 1272 aaKnown RBP15.91■□□□□ 0.14
ERBB3-215ENST00000550828 CABP5Q9NP86 173 aa15.91■□□□□ 0.14
ERBB3-215ENST00000550828 PICK1Q9NRD5 415 aa15.91■□□□□ 0.14
ERBB3-215ENST00000550828 WDR19Q8NEZ3 1342 aa15.91■□□□□ 0.14
ERBB3-215ENST00000550828 UNCXA6NJT0 531 aa15.9■□□□□ 0.14
ERBB3-215ENST00000550828 USP17L5A8MUK1 530 aa15.9■□□□□ 0.14
ERBB3-215ENST00000550828 MCM5P33992 734 aa15.9■□□□□ 0.14
ERBB3-215ENST00000550828 RUFY3Q7L099 469 aa15.9■□□□□ 0.14
ERBB3-215ENST00000550828 ERO1BQ86YB8 467 aa15.9■□□□□ 0.14
ERBB3-215ENST00000550828 LRRC47Q8N1G4 583 aaKnown RBP15.9■□□□□ 0.14
ERBB3-215ENST00000550828 OPTNQ96CV9 577 aa15.9■□□□□ 0.14
ERBB3-215ENST00000550828 OTUD5Q96G74 571 aa15.9■□□□□ 0.14
ERBB3-215ENST00000550828 WNK4Q96J92 1243 aa15.9■□□□□ 0.14
ERBB3-215ENST00000550828 WDR18Q9BV38 432 aa15.9■□□□□ 0.14
ERBB3-215ENST00000550828 LY9Q9HBG7 655 aa15.9■□□□□ 0.14
ERBB3-215ENST00000550828 AFG3L2Q9Y4W6 797 aa15.9■□□□□ 0.14
ERBB3-215ENST00000550828 ZHX2Q9Y6X8 837 aa15.9■□□□□ 0.14
ERBB3-215ENST00000550828 BAZ2BQ9UIF8 2168 aaKnown RBP15.9■□□□□ 0.14
ERBB3-215ENST00000550828 FAM155AB1AL88 458 aaPredicted RBP15.89■□□□□ 0.13
ERBB3-215ENST00000550828 IFIT3O14879 490 aaKnown RBP15.89■□□□□ 0.13
ERBB3-215ENST00000550828 CA12O43570 354 aa15.89■□□□□ 0.13
ERBB3-215ENST00000550828 PSMA5P28066 241 aa15.89■□□□□ 0.13
ERBB3-215ENST00000550828 NT5C2P49902 561 aa15.89■□□□□ 0.13
ERBB3-215ENST00000550828 TOB2Q14106 344 aaPredicted RBP15.89■□□□□ 0.13
ERBB3-215ENST00000550828 PAXIP1Q6ZW49 1069 aaPredicted RBP15.89■□□□□ 0.13
ERBB3-215ENST00000550828 ANKS1AQ92625 1134 aa15.89■□□□□ 0.13
ERBB3-215ENST00000550828 SLC10A4Q96EP9 437 aa15.89■□□□□ 0.13
ERBB3-215ENST00000550828 AGXT2Q9BYV1 514 aa15.89■□□□□ 0.13
ERBB3-215ENST00000550828 KANSL2Q9H9L4 492 aa15.89■□□□□ 0.13
ERBB3-215ENST00000550828 NYAP2Q9P242 653 aa15.89■□□□□ 0.13
ERBB3-215ENST00000550828 COL11A1P12107 1806 aaPredicted RBP15.89■□□□□ 0.13
ERBB3-215ENST00000550828 IRF6O14896 467 aa15.88■□□□□ 0.13
ERBB3-215ENST00000550828 HMGB1P09429 215 aaKnown RBP15.88■□□□□ 0.13
ERBB3-215ENST00000550828 MAP2K2P36507 400 aa15.88■□□□□ 0.13
ERBB3-215ENST00000550828 SPP2Q13103 211 aa15.88■□□□□ 0.13
ERBB3-215ENST00000550828 PPIL2Q13356 520 aa15.88■□□□□ 0.13
ERBB3-215ENST00000550828 MOGSQ13724 837 aa15.88■□□□□ 0.13
ERBB3-215ENST00000550828 TMEM67Q5HYA8 995 aa15.88■□□□□ 0.13
ERBB3-215ENST00000550828 SPRYD7Q5W111 196 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms