RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 BMP2KLQ5H9B9 411 aa16.34■□□□□ 0.21
TROAP-213ENST00000550709 ZNF296Q8WUU4 475 aaPredicted RBP16.34■□□□□ 0.21
TROAP-213ENST00000550709 AGTPBP1Q9UPW5 1226 aa16.34■□□□□ 0.21
TROAP-213ENST00000550709 MYH1P12882 1939 aa16.34■□□□□ 0.21
TROAP-213ENST00000550709 ROBO3Q96MS0 1386 aa16.34■□□□□ 0.21
TROAP-213ENST00000550709 C19orf81C9J6K1 198 aa16.33■□□□□ 0.2
TROAP-213ENST00000550709 SH3D19Q5HYK7 790 aa16.33■□□□□ 0.2
TROAP-213ENST00000550709 FAM47AQ5JRC9 791 aa16.33■□□□□ 0.2
TROAP-213ENST00000550709 USP17L2Q6R6M4 530 aa16.33■□□□□ 0.2
TROAP-213ENST00000550709 CFHR5Q9BXR6 569 aa16.33■□□□□ 0.2
TROAP-213ENST00000550709 ZCCHC17Q9NP64 241 aaKnown RBP16.33■□□□□ 0.2
TROAP-213ENST00000550709 TOMM22Q9NS69 142 aa16.33■□□□□ 0.2
TROAP-213ENST00000550709 EMILIN3Q9NT22 766 aa16.33■□□□□ 0.2
TROAP-213ENST00000550709 TACC3Q9Y6A5 838 aa16.33■□□□□ 0.2
TROAP-213ENST00000550709 DDX60LQ5H9U9 1706 aaKnown RBP16.33■□□□□ 0.2
TROAP-213ENST00000550709 A0A1W2PRG0 241 aa16.32■□□□□ 0.2
TROAP-213ENST00000550709 SIAH1Q8IUQ4 282 aa16.32■□□□□ 0.2
TROAP-213ENST00000550709 PROCA1Q8NCQ7 364 aaPredicted RBP16.32■□□□□ 0.2
TROAP-213ENST00000550709 PARK7Q99497 189 aaKnown RBP16.32■□□□□ 0.2
TROAP-213ENST00000550709 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.32■□□□□ 0.2
TROAP-213ENST00000550709 KANSL2Q9H9L4 492 aa16.32■□□□□ 0.2
TROAP-213ENST00000550709 CPA4Q9UI42 421 aa16.32■□□□□ 0.2
TROAP-213ENST00000550709 RAD50Q92878 1312 aa16.31■□□□□ 0.2
TROAP-213ENST00000550709 SGSM2O43147 1006 aa16.31■□□□□ 0.2
TROAP-213ENST00000550709 RAD21O60216 631 aa16.31■□□□□ 0.2
TROAP-213ENST00000550709 RANBP6O60518 1105 aaKnown RBP16.31■□□□□ 0.2
TROAP-213ENST00000550709 TLR2O60603 784 aa16.31■□□□□ 0.2
TROAP-213ENST00000550709 FKTNO75072 461 aa16.31■□□□□ 0.2
TROAP-213ENST00000550709 ECM2O94769 699 aaPredicted RBP16.31■□□□□ 0.2
TROAP-213ENST00000550709 TSPY3P0CV98 308 aa16.31■□□□□ 0.2
TROAP-213ENST00000550709 TSPY8P0CW00 308 aa16.31■□□□□ 0.2
TROAP-213ENST00000550709 EEF2P13639 858 aaKnown RBP16.31■□□□□ 0.2
TROAP-213ENST00000550709 TFAP4Q01664 338 aa16.31■□□□□ 0.2
TROAP-213ENST00000550709 RRP12Q5JTH9 1297 aaKnown RBP16.31■□□□□ 0.2
TROAP-213ENST00000550709 SMCR8Q8TEV9 937 aaPredicted RBP16.31■□□□□ 0.2
TROAP-213ENST00000550709 DSCC1Q9BVC3 393 aa16.31■□□□□ 0.2
TROAP-213ENST00000550709 KIAA1683Q9H0B3 1180 aa16.31■□□□□ 0.2
TROAP-213ENST00000550709 ARHGEF10LQ9HCE6 1279 aa16.31■□□□□ 0.2
TROAP-213ENST00000550709 ANAPC4Q9UJX5 808 aa16.31■□□□□ 0.2
TROAP-213ENST00000550709 BAZ2AQ9UIF9 1905 aaKnown RBP16.31■□□□□ 0.2
TROAP-213ENST00000550709 ZNF213O14771 459 aa16.3■□□□□ 0.2
TROAP-213ENST00000550709 OSBPP22059 807 aa16.3■□□□□ 0.2
TROAP-213ENST00000550709 USP14P54578 494 aa16.3■□□□□ 0.2
TROAP-213ENST00000550709 PTH1RQ03431 593 aa16.3■□□□□ 0.2
TROAP-213ENST00000550709 PABPC4Q13310 644 aaKnown RBP eCLIP16.3■□□□□ 0.21e-9■□□□□ 11
TROAP-213ENST00000550709 TBC1D10CQ8IV04 446 aa16.3■□□□□ 0.2
TROAP-213ENST00000550709 NBPF3Q9H094 633 aa16.3■□□□□ 0.2
TROAP-213ENST00000550709 ASCC2Q9H1I8 757 aaPredicted RBP16.3■□□□□ 0.2
TROAP-213ENST00000550709 CTNNA3Q9UI47 895 aa16.3■□□□□ 0.2
TROAP-213ENST00000550709 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.3■□□□□ 0.2
TROAP-213ENST00000550709 SLC45A1Q9Y2W3 748 aa16.3■□□□□ 0.2
TROAP-213ENST00000550709 DOCK1Q14185 1865 aa16.3■□□□□ 0.2
TROAP-213ENST00000550709 ZMYM6O95789 1325 aa16.29■□□□□ 0.2
TROAP-213ENST00000550709 TSPY2A6NKD2 308 aa16.29■□□□□ 0.2
TROAP-213ENST00000550709 IRX3P78415 501 aaPredicted RBP16.29■□□□□ 0.2
TROAP-213ENST00000550709 SP3Q02447 781 aa16.29■□□□□ 0.2
TROAP-213ENST00000550709 SPICE1Q8N0Z3 855 aa16.29■□□□□ 0.2
TROAP-213ENST00000550709 CLIP2Q9UDT6 1046 aa16.29■□□□□ 0.2
TROAP-213ENST00000550709 PNMA3Q9UL41 463 aa16.29■□□□□ 0.2
TROAP-213ENST00000550709 VCAM1P19320 739 aa16.28■□□□□ 0.2
TROAP-213ENST00000550709 IMMTQ16891 758 aaKnown RBP16.28■□□□□ 0.2
TROAP-213ENST00000550709 NOM1Q5C9Z4 860 aaKnown RBP16.28■□□□□ 0.2
TROAP-213ENST00000550709 KIAA1755Q5JYT7 1200 aa16.28■□□□□ 0.2
TROAP-213ENST00000550709 AKNAD1Q5T1N1 836 aa16.28■□□□□ 0.2
TROAP-213ENST00000550709 MFSD6Q6ZSS7 791 aa16.28■□□□□ 0.2
TROAP-213ENST00000550709 KIAA1211Q6ZU35 1233 aa16.28■□□□□ 0.2
TROAP-213ENST00000550709 NEDD1Q8NHV4 660 aa16.28■□□□□ 0.2
TROAP-213ENST00000550709 CD99L2Q8TCZ2 262 aa16.28■□□□□ 0.2
TROAP-213ENST00000550709 CEP95Q96GE4 821 aa16.28■□□□□ 0.2
TROAP-213ENST00000550709 ESYT1Q9BSJ8 1104 aa16.28■□□□□ 0.2
TROAP-213ENST00000550709 SH2D4AQ9H788 454 aa16.28■□□□□ 0.2
TROAP-213ENST00000550709 TMX2Q9Y320 296 aa16.28■□□□□ 0.2
TROAP-213ENST00000550709 ORC4O43929 436 aa16.27■□□□□ 0.2
TROAP-213ENST00000550709 NMT2O60551 498 aa16.27■□□□□ 0.2
TROAP-213ENST00000550709 CDC45O75419 566 aa16.27■□□□□ 0.2
TROAP-213ENST00000550709 HOXA7P31268 230 aaPredicted RBP16.27■□□□□ 0.2
TROAP-213ENST00000550709 SAMD1Q6SPF0 538 aaPredicted RBP16.27■□□□□ 0.2
TROAP-213ENST00000550709 C17orf99Q6UX52 265 aa16.27■□□□□ 0.2
TROAP-213ENST00000550709 TNS4Q8IZW8 715 aa16.27■□□□□ 0.2
TROAP-213ENST00000550709 STAG1Q8WVM7 1258 aa16.27■□□□□ 0.2
TROAP-213ENST00000550709 C12orf42Q96LP6 360 aa16.27■□□□□ 0.2
TROAP-213ENST00000550709 P2RX7Q99572 595 aaKnown RBP16.27■□□□□ 0.2
TROAP-213ENST00000550709 RPAP3Q9H6T3 665 aaPredicted RBP16.27■□□□□ 0.2
TROAP-213ENST00000550709 MTMR4Q9NYA4 1195 aa16.27■□□□□ 0.2
TROAP-213ENST00000550709 ADGRA2Q96PE1 1338 aa16.26■□□□□ 0.19
TROAP-213ENST00000550709 IGKV6D-41A0A0C4DH26 115 aa16.26■□□□□ 0.19
TROAP-213ENST00000550709 USP17L15C9J2P7 530 aa16.26■□□□□ 0.19
TROAP-213ENST00000550709 USP17L13C9JLJ4 530 aa16.26■□□□□ 0.19
TROAP-213ENST00000550709 USP17L11C9JVI0 530 aa16.26■□□□□ 0.19
TROAP-213ENST00000550709 USP17L18D6R9N7 530 aa16.26■□□□□ 0.19
TROAP-213ENST00000550709 USP17L22D6RA61 530 aa16.26■□□□□ 0.19
TROAP-213ENST00000550709 USP17L17D6RBQ6 530 aa16.26■□□□□ 0.19
TROAP-213ENST00000550709 USP17L19D6RCP7 530 aa16.26■□□□□ 0.19
TROAP-213ENST00000550709 USP17L20D6RJB6 530 aa16.26■□□□□ 0.19
TROAP-213ENST00000550709 USP17L24Q0WX57 530 aa16.26■□□□□ 0.19
TROAP-213ENST00000550709 CASC1Q6TDU7 716 aa16.26■□□□□ 0.19
TROAP-213ENST00000550709 ANKRD13CQ8N6S4 541 aa16.26■□□□□ 0.19
TROAP-213ENST00000550709 CHMP4CQ96CF2 233 aa16.26■□□□□ 0.19
TROAP-213ENST00000550709 ERO1AQ96HE7 468 aa16.26■□□□□ 0.19
TROAP-213ENST00000550709 TANGO6Q9C0B7 1094 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms