RNA–Protein interactions for RNA: ENST00000550504.5

RAB5C-207, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-207ENST00000550504 PLIN4Q96Q06 1357 aa12.08□□□□□ -0.48
RAB5C-207ENST00000550504 IGKV6D-41A0A0C4DH26 115 aa12.08□□□□□ -0.48
RAB5C-207ENST00000550504 CCDC69A6NI79 296 aa12.08□□□□□ -0.48
RAB5C-207ENST00000550504 PPP1R12BO60237 982 aaPredicted RBP12.08□□□□□ -0.48
RAB5C-207ENST00000550504 CTNND1O60716 968 aaKnown RBP12.08□□□□□ -0.48
RAB5C-207ENST00000550504 GUCY1A2P33402 732 aa12.08□□□□□ -0.48
RAB5C-207ENST00000550504 ANKRD1Q15327 319 aa12.08□□□□□ -0.48
RAB5C-207ENST00000550504 SEC23AQ15436 765 aa12.08□□□□□ -0.48
RAB5C-207ENST00000550504 IFIT1BQ5T764 474 aaKnown RBP12.08□□□□□ -0.48
RAB5C-207ENST00000550504 RAB11FIP4Q86YS3 637 aa12.08□□□□□ -0.48
RAB5C-207ENST00000550504 JMYQ8N9B5 988 aa12.08□□□□□ -0.48
RAB5C-207ENST00000550504 KLRG1Q96E93 195 aa12.08□□□□□ -0.48
RAB5C-207ENST00000550504 ALDH8A1Q9H2A2 487 aaPredicted RBP12.08□□□□□ -0.48
RAB5C-207ENST00000550504 TCP11L1Q9NUJ3 509 aa12.08□□□□□ -0.48
RAB5C-207ENST00000550504 MTMR4Q9NYA4 1195 aa12.08□□□□□ -0.48
RAB5C-207ENST00000550504 ZNF112Q9UJU3 913 aa12.08□□□□□ -0.48
RAB5C-207ENST00000550504 KLF18A0A0U1RQI7 1052 aa12.07□□□□□ -0.48
RAB5C-207ENST00000550504 CELF2O95319 508 aaKnown RBP12.07□□□□□ -0.48
RAB5C-207ENST00000550504 ITGBL1O95965 494 aaPredicted RBP12.07□□□□□ -0.48
RAB5C-207ENST00000550504 IREB2P48200 963 aaKnown RBP12.07□□□□□ -0.48
RAB5C-207ENST00000550504 ICA1Q05084 483 aa12.07□□□□□ -0.48
RAB5C-207ENST00000550504 CCDC178Q5BJE1 867 aa12.07□□□□□ -0.48
RAB5C-207ENST00000550504 RCSD1Q6JBY9 416 aa12.07□□□□□ -0.48
RAB5C-207ENST00000550504 DGKHQ86XP1 1220 aa12.07□□□□□ -0.48
RAB5C-207ENST00000550504 HSCBQ8IWL3 235 aa12.07□□□□□ -0.48
RAB5C-207ENST00000550504 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.07□□□□□ -0.48
RAB5C-207ENST00000550504 CHMP4CQ96CF2 233 aa12.07□□□□□ -0.48
RAB5C-207ENST00000550504 MTA3Q9BTC8 594 aa12.07□□□□□ -0.48
RAB5C-207ENST00000550504 AGXT2Q9BYV1 514 aa12.07□□□□□ -0.48
RAB5C-207ENST00000550504 KANSL2Q9H9L4 492 aa12.07□□□□□ -0.48
RAB5C-207ENST00000550504 CLIP2Q9UDT6 1046 aa12.07□□□□□ -0.48
RAB5C-207ENST00000550504 BRPF3Q9ULD4 1205 aa12.07□□□□□ -0.48
RAB5C-207ENST00000550504 TPCN1Q9ULQ1 816 aa12.07□□□□□ -0.48
RAB5C-207ENST00000550504 GREB1LQ9C091 1923 aaPredicted RBP12.07□□□□□ -0.48
RAB5C-207ENST00000550504 ATAD5Q96QE3 1844 aa12.07□□□□□ -0.48
RAB5C-207ENST00000550504 DOCK1Q14185 1865 aa12.06□□□□□ -0.48
RAB5C-207ENST00000550504 GOLGA8BA8MQT2 603 aa12.06□□□□□ -0.48
RAB5C-207ENST00000550504 UBE2Q2LH0YL09 131 aa12.06□□□□□ -0.48
RAB5C-207ENST00000550504 TTLL1O95922 423 aa12.06□□□□□ -0.48
RAB5C-207ENST00000550504 ASNSP08243 561 aa12.06□□□□□ -0.48
RAB5C-207ENST00000550504 EEF2P13639 858 aaKnown RBP12.06□□□□□ -0.48
RAB5C-207ENST00000550504 LIFRP42702 1097 aa12.06□□□□□ -0.48
RAB5C-207ENST00000550504 MAP3K9P80192 1104 aa12.06□□□□□ -0.48
RAB5C-207ENST00000550504 STK3Q13188 491 aa12.06□□□□□ -0.48
RAB5C-207ENST00000550504 VGLL4Q14135 290 aa12.06□□□□□ -0.48
RAB5C-207ENST00000550504 ARMC9Q7Z3E5 817 aa12.06□□□□□ -0.48
RAB5C-207ENST00000550504 SCYL3Q8IZE3 742 aa12.06□□□□□ -0.48
RAB5C-207ENST00000550504 LRRC47Q8N1G4 583 aaKnown RBP12.06□□□□□ -0.48
RAB5C-207ENST00000550504 SMC1BQ8NDV3 1235 aa12.06□□□□□ -0.48
RAB5C-207ENST00000550504 RBM46Q8TBY0 533 aaKnown RBP12.06□□□□□ -0.48
RAB5C-207ENST00000550504 SNX21Q969T3 373 aa12.06□□□□□ -0.48
RAB5C-207ENST00000550504 TMEM47Q9BQJ4 181 aa12.06□□□□□ -0.48
RAB5C-207ENST00000550504 MYL10Q9BUA6 226 aa12.06□□□□□ -0.48
RAB5C-207ENST00000550504 TBC1D2Q9BYX2 928 aa12.06□□□□□ -0.48
RAB5C-207ENST00000550504 KAT14Q9H8E8 782 aa12.06□□□□□ -0.48
RAB5C-207ENST00000550504 GBA2Q9HCG7 927 aaPredicted RBP12.06□□□□□ -0.48
RAB5C-207ENST00000550504 PICK1Q9NRD5 415 aa12.06□□□□□ -0.48
RAB5C-207ENST00000550504 LIMCH1Q9UPQ0 1083 aa12.06□□□□□ -0.48
RAB5C-207ENST00000550504 MTMR7Q9Y216 660 aa12.06□□□□□ -0.48
RAB5C-207ENST00000550504 OTOFQ9HC10 1997 aa12.05□□□□□ -0.48
RAB5C-207ENST00000550504 LARGE1O95461 756 aa12.05□□□□□ -0.48
RAB5C-207ENST00000550504 TOP1P11387 765 aaKnown RBP12.05□□□□□ -0.48
RAB5C-207ENST00000550504 RXRAP19793 462 aa12.05□□□□□ -0.48
RAB5C-207ENST00000550504 ECE1P42892 770 aa12.05□□□□□ -0.48
RAB5C-207ENST00000550504 MCM2P49736 904 aa12.05□□□□□ -0.48
RAB5C-207ENST00000550504 ME3Q16798 604 aa12.05□□□□□ -0.48
RAB5C-207ENST00000550504 NOL9Q5SY16 702 aaKnown RBP12.05□□□□□ -0.48
RAB5C-207ENST00000550504 APOA5Q6Q788 366 aa12.05□□□□□ -0.48
RAB5C-207ENST00000550504 SYNE3Q6ZMZ3 975 aa12.05□□□□□ -0.48
RAB5C-207ENST00000550504 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.05□□□□□ -0.48
RAB5C-207ENST00000550504 CATIPQ7Z7H3 387 aa12.05□□□□□ -0.48
RAB5C-207ENST00000550504 SGMS1Q86VZ5 419 aa12.05□□□□□ -0.48
RAB5C-207ENST00000550504 SIAH1Q8IUQ4 282 aa12.05□□□□□ -0.48
RAB5C-207ENST00000550504 CCDC144CPQ8IYA2 1237 aa12.05□□□□□ -0.48
RAB5C-207ENST00000550504 TMTC2Q8N394 836 aa12.05□□□□□ -0.48
RAB5C-207ENST00000550504 FBXL16Q8N461 479 aa12.05□□□□□ -0.48
RAB5C-207ENST00000550504 IL27Q8NEV9 243 aa12.05□□□□□ -0.48
RAB5C-207ENST00000550504 NUP133Q8WUM0 1156 aa12.05□□□□□ -0.48
RAB5C-207ENST00000550504 ANKS1AQ92625 1134 aa12.05□□□□□ -0.48
RAB5C-207ENST00000550504 CLMNQ96JQ2 1002 aa12.05□□□□□ -0.48
RAB5C-207ENST00000550504 ELP3Q9H9T3 547 aa12.05□□□□□ -0.48
RAB5C-207ENST00000550504 ARHGEF10LQ9HCE6 1279 aa12.05□□□□□ -0.48
RAB5C-207ENST00000550504 NYAP2Q9P242 653 aa12.05□□□□□ -0.48
RAB5C-207ENST00000550504 CSADQ9Y600 493 aa12.05□□□□□ -0.48
RAB5C-207ENST00000550504 SLC12A7Q9Y666 1083 aa12.05□□□□□ -0.48
RAB5C-207ENST00000550504 SNCAIPQ9Y6H5 919 aa12.05□□□□□ -0.48
RAB5C-207ENST00000550504 USP17L5A8MUK1 530 aa12.04□□□□□ -0.48
RAB5C-207ENST00000550504 K7ELQ4 463 aaPredicted RBP12.04□□□□□ -0.48
RAB5C-207ENST00000550504 ZBTB43O43298 467 aa12.04□□□□□ -0.48
RAB5C-207ENST00000550504 RAD21O60216 631 aa12.04□□□□□ -0.48
RAB5C-207ENST00000550504 PTPRAP18433 802 aa12.04□□□□□ -0.48
RAB5C-207ENST00000550504 PDIA3P30101 505 aaKnown RBP12.04□□□□□ -0.48
RAB5C-207ENST00000550504 CCT2P78371 535 aaKnown RBP12.04□□□□□ -0.48
RAB5C-207ENST00000550504 BECN1Q14457 450 aa12.04□□□□□ -0.48
RAB5C-207ENST00000550504 ZYXQ15942 572 aaKnown RBP12.04□□□□□ -0.48
RAB5C-207ENST00000550504 MAP3K11Q16584 847 aa12.04□□□□□ -0.48
RAB5C-207ENST00000550504 PPP4R3BQ5MIZ7 849 aa12.04□□□□□ -0.48
RAB5C-207ENST00000550504 CST9Q5W186 159 aa12.04□□□□□ -0.48
RAB5C-207ENST00000550504 MICU3Q86XE3 530 aa12.04□□□□□ -0.48
RAB5C-207ENST00000550504 ANKRD13AQ8IZ07 590 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms