RNA–Protein interactions for RNA: ENST00000550160.5

CNOT2-223, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 5

Gene CNOT2, Length 993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-223	ENST00000550160	CDAN1	Q8IWY9	1227 aa		13.61	□□□□□ -0.23
CNOT2-223	ENST00000550160	ZNF274	Q96GC6	653 aa	Predicted RBP	13.61	□□□□□ -0.23
CNOT2-223	ENST00000550160	KAT14	Q9H8E8	782 aa		13.61	□□□□□ -0.23
CNOT2-223	ENST00000550160	KANSL2	Q9H9L4	492 aa		13.61	□□□□□ -0.23
CNOT2-223	ENST00000550160	STX8	Q9UNK0	236 aa		13.61	□□□□□ -0.23
CNOT2-223	ENST00000550160	SIPA1L1	O43166	1804 aa		13.6	□□□□□ -0.23
CNOT2-223	ENST00000550160	GOLGA8B	A8MQT2	603 aa		13.6	□□□□□ -0.23
CNOT2-223	ENST00000550160	ADM5	C9JUS6	153 aa		13.6	□□□□□ -0.23
CNOT2-223	ENST00000550160	DHX16	O60231	1041 aa	Known RBP	13.6	□□□□□ -0.23
CNOT2-223	ENST00000550160	PPP1R12B	O60237	982 aa	Predicted RBP	13.6	□□□□□ -0.23
CNOT2-223	ENST00000550160	CTNND1	O60716	968 aa	Known RBP	13.6	□□□□□ -0.23
CNOT2-223	ENST00000550160	GDF11	O95390	407 aa		13.6	□□□□□ -0.23
CNOT2-223	ENST00000550160	TTLL1	O95922	423 aa		13.6	□□□□□ -0.23
CNOT2-223	ENST00000550160	ASNS	P08243	561 aa		13.6	□□□□□ -0.23
CNOT2-223	ENST00000550160	CAP2	P40123	477 aa		13.6	□□□□□ -0.23
CNOT2-223	ENST00000550160	EVC	P57679	992 aa		13.6	□□□□□ -0.23
CNOT2-223	ENST00000550160	APOA5	Q6Q788	366 aa		13.6	□□□□□ -0.23
CNOT2-223	ENST00000550160	NMRK2	Q9NPI5	230 aa		13.6	□□□□□ -0.23
CNOT2-223	ENST00000550160	TPCN1	Q9ULQ1	816 aa		13.6	□□□□□ -0.23
CNOT2-223	ENST00000550160	MYH8	P13535	1937 aa		13.6	□□□□□ -0.23
CNOT2-223	ENST00000550160	CCDC196	A0A1B0GTZ2	297 aa		13.59	□□□□□ -0.23
CNOT2-223	ENST00000550160	ZBTB43	O43298	467 aa		13.59	□□□□□ -0.23
CNOT2-223	ENST00000550160	NMT2	O60551	498 aa		13.59	□□□□□ -0.23
CNOT2-223	ENST00000550160	DDAH1	O94760	285 aa		13.59	□□□□□ -0.23
CNOT2-223	ENST00000550160	GH2	P01242	217 aa		13.59	□□□□□ -0.23
CNOT2-223	ENST00000550160	TOP1	P11387	765 aa	Known RBP	13.59	□□□□□ -0.23
CNOT2-223	ENST00000550160	RAB3GAP1	Q15042	981 aa		13.59	□□□□□ -0.23
CNOT2-223	ENST00000550160	PPP2R5B	Q15173	497 aa		13.59	□□□□□ -0.23
CNOT2-223	ENST00000550160	PRAMEF18	Q5VWM3	479 aa		13.59	□□□□□ -0.23
CNOT2-223	ENST00000550160	CPLX2	Q6PUV4	134 aa	Known RBP	13.59	□□□□□ -0.23
CNOT2-223	ENST00000550160	ZNF654	Q8IZM8	581 aa		13.59	□□□□□ -0.23
CNOT2-223	ENST00000550160	NKX2-3	Q8TAU0	364 aa		13.59	□□□□□ -0.23
CNOT2-223	ENST00000550160	ANKS1A	Q92625	1134 aa		13.59	□□□□□ -0.23
CNOT2-223	ENST00000550160	CDCA5	Q96FF9	252 aa		13.59	□□□□□ -0.23
CNOT2-223	ENST00000550160	CEP95	Q96GE4	821 aa		13.59	□□□□□ -0.23
CNOT2-223	ENST00000550160	LARP6	Q9BRS8	491 aa	Known RBP	13.59	□□□□□ -0.23
CNOT2-223	ENST00000550160	GPBP1L1	Q9HC44	474 aa	Predicted RBP	13.59	□□□□□ -0.23
CNOT2-223	ENST00000550160	GPHN	Q9NQX3	736 aa	Predicted RBP	13.59	□□□□□ -0.23
CNOT2-223	ENST00000550160	IL17RB	Q9NRM6	502 aa		13.59	□□□□□ -0.23
CNOT2-223	ENST00000550160	MTMR4	Q9NYA4	1195 aa		13.59	□□□□□ -0.23
CNOT2-223	ENST00000550160	ZBTB21	Q9ULJ3	1066 aa		13.59	□□□□□ -0.23
CNOT2-223	ENST00000550160	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	13.59	□□□□□ -0.23
CNOT2-223	ENST00000550160	IGKV6D-41	A0A0C4DH26	115 aa		13.58	□□□□□ -0.24
CNOT2-223	ENST00000550160	CPLX1	O14810	134 aa		13.58	□□□□□ -0.24
CNOT2-223	ENST00000550160	PDIA3	P30101	505 aa	Known RBP	13.58	□□□□□ -0.24
CNOT2-223	ENST00000550160	IREB2	P48200	963 aa	Known RBP	13.58	□□□□□ -0.24
CNOT2-223	ENST00000550160	METAP2	P50579	478 aa	Known RBP eCLIP	13.58	□□□□□ -0.24
CNOT2-223	ENST00000550160	ATP2B2	Q01814	1243 aa		13.58	□□□□□ -0.24
CNOT2-223	ENST00000550160	ICA1	Q05084	483 aa		13.58	□□□□□ -0.24
CNOT2-223	ENST00000550160	STK3	Q13188	491 aa		13.58	□□□□□ -0.24
CNOT2-223	ENST00000550160	ME3	Q16798	604 aa		13.58	□□□□□ -0.24
CNOT2-223	ENST00000550160	MICU3	Q86XE3	530 aa		13.58	□□□□□ -0.24
CNOT2-223	ENST00000550160	PNMA1	Q8ND90	353 aa		13.58	□□□□□ -0.24
CNOT2-223	ENST00000550160	CTCFL	Q8NI51	663 aa	Predicted RBP	13.58	□□□□□ -0.24
CNOT2-223	ENST00000550160	WRNIP1	Q96S55	665 aa		13.58	□□□□□ -0.24
CNOT2-223	ENST00000550160	GLIS2	Q9BZE0	524 aa	Predicted RBP	13.58	□□□□□ -0.24
CNOT2-223	ENST00000550160	SH2D4A	Q9H788	454 aa		13.58	□□□□□ -0.24
CNOT2-223	ENST00000550160	ARHGEF10L	Q9HCE6	1279 aa		13.58	□□□□□ -0.24
CNOT2-223	ENST00000550160	PICK1	Q9NRD5	415 aa		13.58	□□□□□ -0.24
CNOT2-223	ENST00000550160	NYAP2	Q9P242	653 aa		13.58	□□□□□ -0.24
CNOT2-223	ENST00000550160	BRPF3	Q9ULD4	1205 aa		13.58	□□□□□ -0.24
CNOT2-223	ENST00000550160	SYNPO2	Q9UMS6	1093 aa		13.58	□□□□□ -0.24
CNOT2-223	ENST00000550160	GOLGA8A	A7E2F4	631 aa		13.57	□□□□□ -0.24
CNOT2-223	ENST00000550160	PHF20L1	A8MW92	1017 aa		13.57	□□□□□ -0.24
CNOT2-223	ENST00000550160	PFKFB2	O60825	505 aa		13.57	□□□□□ -0.24
CNOT2-223	ENST00000550160	SLURP2	P0DP57	97 aa		13.57	□□□□□ -0.24
CNOT2-223	ENST00000550160	KIF5B	P33176	963 aa		13.57	□□□□□ -0.24
CNOT2-223	ENST00000550160	SEPT2	Q15019	361 aa		13.57	□□□□□ -0.24
CNOT2-223	ENST00000550160	MAP1S	Q66K74	1059 aa	Predicted RBP	13.57	□□□□□ -0.24
CNOT2-223	ENST00000550160	RCSD1	Q6JBY9	416 aa		13.57	□□□□□ -0.24
CNOT2-223	ENST00000550160	ARMC9	Q7Z3E5	817 aa		13.57	□□□□□ -0.24
CNOT2-223	ENST00000550160	CCDC83	Q8IWF9	413 aa		13.57	□□□□□ -0.24
CNOT2-223	ENST00000550160	NUP133	Q8WUM0	1156 aa		13.57	□□□□□ -0.24
CNOT2-223	ENST00000550160	INTS4	Q96HW7	963 aa	Known RBP	13.57	□□□□□ -0.24
CNOT2-223	ENST00000550160	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	13.57	□□□□□ -0.24
CNOT2-223	ENST00000550160	CLIP2	Q9UDT6	1046 aa		13.57	□□□□□ -0.24
CNOT2-223	ENST00000550160	GOLGB1	Q14789	3259 aa	Known RBP	13.56	□□□□□ -0.24
CNOT2-223	ENST00000550160	CDKL5	O76039	1030 aa		13.56	□□□□□ -0.24
CNOT2-223	ENST00000550160	LARGE1	O95461	756 aa		13.56	□□□□□ -0.24
CNOT2-223	ENST00000550160	NOV	P48745	357 aa		13.56	□□□□□ -0.24
CNOT2-223	ENST00000550160	CUL4A	Q13619	759 aa		13.56	□□□□□ -0.24
CNOT2-223	ENST00000550160	TTLL12	Q14166	644 aa	Predicted RBP	13.56	□□□□□ -0.24
CNOT2-223	ENST00000550160	RTN1	Q16799	776 aa		13.56	□□□□□ -0.24
CNOT2-223	ENST00000550160	SCYL3	Q8IZE3	742 aa		13.56	□□□□□ -0.24
CNOT2-223	ENST00000550160	GTF3C6	Q969F1	213 aa		13.56	□□□□□ -0.24
CNOT2-223	ENST00000550160	KLRG1	Q96E93	195 aa		13.56	□□□□□ -0.24
CNOT2-223	ENST00000550160	MAP3K14	Q99558	947 aa		13.56	□□□□□ -0.24
CNOT2-223	ENST00000550160	TMEM47	Q9BQJ4	181 aa		13.56	□□□□□ -0.24
CNOT2-223	ENST00000550160	AS3MT	Q9HBK9	375 aa		13.56	□□□□□ -0.24
CNOT2-223	ENST00000550160	SENP2	Q9HC62	589 aa		13.56	□□□□□ -0.24
CNOT2-223	ENST00000550160	RBM28	Q9NW13	759 aa	Known RBP	13.56	□□□□□ -0.24
CNOT2-223	ENST00000550160	ZNF112	Q9UJU3	913 aa		13.56	□□□□□ -0.24
CNOT2-223	ENST00000550160	CSAD	Q9Y600	493 aa		13.56	□□□□□ -0.24
CNOT2-223	ENST00000550160	SSC5D	A1L4H1	1573 aa		13.55	□□□□□ -0.24
CNOT2-223	ENST00000550160	POTEI	P0CG38	1075 aa		13.55	□□□□□ -0.24
CNOT2-223	ENST00000550160	POTEJ	P0CG39	1038 aa		13.55	□□□□□ -0.24
CNOT2-223	ENST00000550160	EEF2	P13639	858 aa	Known RBP	13.55	□□□□□ -0.24
CNOT2-223	ENST00000550160	SLC4A3	P48751	1232 aa		13.55	□□□□□ -0.24
CNOT2-223	ENST00000550160	CCT2	P78371	535 aa	Known RBP	13.55	□□□□□ -0.24
CNOT2-223	ENST00000550160	PRKG1	Q13976	671 aa		13.55	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms