RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 APPP05067 770 aa20.62■□□□□ 0.89
CHMP1A-208ENST00000550102 GCLCP48506 637 aaPredicted RBP20.62■□□□□ 0.89
CHMP1A-208ENST00000550102 CDK8P49336 464 aa20.62■□□□□ 0.89
CHMP1A-208ENST00000550102 USP14P54578 494 aa20.62■□□□□ 0.89
CHMP1A-208ENST00000550102 ZYXQ15942 572 aaKnown RBP20.62■□□□□ 0.89
CHMP1A-208ENST00000550102 TICAM2Q86XR7 235 aa20.62■□□□□ 0.89
CHMP1A-208ENST00000550102 PLEKHM2Q8IWE5 1019 aa20.62■□□□□ 0.89
CHMP1A-208ENST00000550102 CCDC17Q96LX7 622 aa20.62■□□□□ 0.89
CHMP1A-208ENST00000550102 NACAP1Q9BZK3 213 aa20.62■□□□□ 0.89
CHMP1A-208ENST00000550102 OSBPL3Q9H4L5 887 aa20.62■□□□□ 0.89
CHMP1A-208ENST00000550102 TRIM6-TRIM34B2RNG4 842 aa20.61■□□□□ 0.89
CHMP1A-208ENST00000550102 SMIM22K7EJ46 135 aa20.61■□□□□ 0.89
CHMP1A-208ENST00000550102 GUCY1A2P33402 732 aa20.61■□□□□ 0.89
CHMP1A-208ENST00000550102 PSMC4P43686 418 aa20.61■□□□□ 0.89
CHMP1A-208ENST00000550102 TRIM47Q96LD4 638 aa20.61■□□□□ 0.89
CHMP1A-208ENST00000550102 C12orf42Q96LP6 360 aa20.61■□□□□ 0.89
CHMP1A-208ENST00000550102 EMILIN3Q9NT22 766 aa20.61■□□□□ 0.89
CHMP1A-208ENST00000550102 PARP14Q460N5 1801 aa20.61■□□□□ 0.89
CHMP1A-208ENST00000550102 PATL2C9JE40 543 aaKnown RBP20.6■□□□□ 0.89
CHMP1A-208ENST00000550102 AKR1B1P15121 316 aa20.6■□□□□ 0.89
CHMP1A-208ENST00000550102 HOXA7P31268 230 aaPredicted RBP20.6■□□□□ 0.89
CHMP1A-208ENST00000550102 PRMT2P55345 433 aa20.6■□□□□ 0.89
CHMP1A-208ENST00000550102 FCGRTP55899 365 aa20.6■□□□□ 0.89
CHMP1A-208ENST00000550102 FAM110CQ1W6H9 321 aa20.6■□□□□ 0.89
CHMP1A-208ENST00000550102 ANKRD13CQ8N6S4 541 aa20.6■□□□□ 0.89
CHMP1A-208ENST00000550102 ACER1Q8TDN7 264 aa20.6■□□□□ 0.89
CHMP1A-208ENST00000550102 LAMA4Q16363 1823 aa20.6■□□□□ 0.89
CHMP1A-208ENST00000550102 DOCK3Q8IZD9 2030 aa20.6■□□□□ 0.89
CHMP1A-208ENST00000550102 A0A0G2JMZ2 1700 aa20.59■□□□□ 0.89
CHMP1A-208ENST00000550102 MINDY4BA8MYZ0 360 aa20.59■□□□□ 0.89
CHMP1A-208ENST00000550102 ECM2O94769 699 aaPredicted RBP20.59■□□□□ 0.89
CHMP1A-208ENST00000550102 FMNL1O95466 1100 aaPredicted RBP20.59■□□□□ 0.89
CHMP1A-208ENST00000550102 ICA1Q05084 483 aa20.59■□□□□ 0.89
CHMP1A-208ENST00000550102 NAPBQ9H115 298 aa20.59■□□□□ 0.89
CHMP1A-208ENST00000550102 PTCH2Q9Y6C5 1203 aa20.59■□□□□ 0.89
CHMP1A-208ENST00000550102 CENPFP49454 3210 aa20.58■□□□□ 0.89
CHMP1A-208ENST00000550102 VCAM1P19320 739 aa20.58■□□□□ 0.89
CHMP1A-208ENST00000550102 HOXD10P28358 340 aa20.58■□□□□ 0.89
CHMP1A-208ENST00000550102 CTGFP29279 349 aa20.58■□□□□ 0.89
CHMP1A-208ENST00000550102 CCDC129Q6ZRS4 1044 aa20.58■□□□□ 0.89
CHMP1A-208ENST00000550102 IFNL3Q8IZI9 196 aa20.58■□□□□ 0.89
CHMP1A-208ENST00000550102 RILPL2Q969X0 211 aa20.58■□□□□ 0.89
CHMP1A-208ENST00000550102 SH2D4AQ9H788 454 aa20.58■□□□□ 0.89
CHMP1A-208ENST00000550102 ARHGEF10LQ9HCE6 1279 aa20.58■□□□□ 0.89
CHMP1A-208ENST00000550102 HELLSQ9NRZ9 838 aa20.58■□□□□ 0.89
CHMP1A-208ENST00000550102 RLFQ13129 1914 aa20.57■□□□□ 0.88
CHMP1A-208ENST00000550102 RGS19P49795 217 aa20.57■□□□□ 0.88
CHMP1A-208ENST00000550102 HERVK_113P62684 666 aa20.57■□□□□ 0.88
CHMP1A-208ENST00000550102 SLC9C1Q4G0N8 1177 aa20.57■□□□□ 0.88
CHMP1A-208ENST00000550102 CLEC10AQ8IUN9 316 aa20.57■□□□□ 0.88
CHMP1A-208ENST00000550102 GTF3C2Q8WUA4 911 aaPredicted RBP20.57■□□□□ 0.88
CHMP1A-208ENST00000550102 ZNF287Q9HBT7 754 aa20.57■□□□□ 0.88
CHMP1A-208ENST00000550102 SRRDQ9UH36 339 aa20.57■□□□□ 0.88
CHMP1A-208ENST00000550102 MYPNQ86TC9 1320 aa20.56■□□□□ 0.88
CHMP1A-208ENST00000550102 A0A0D9SFI3 127 aa20.56■□□□□ 0.88
CHMP1A-208ENST00000550102 SOX10P56693 466 aa20.56■□□□□ 0.88
CHMP1A-208ENST00000550102 ARMC5Q96C12 935 aa20.56■□□□□ 0.88
CHMP1A-208ENST00000550102 FAM227BQ96M60 508 aa20.56■□□□□ 0.88
CHMP1A-208ENST00000550102 MKNK2Q9HBH9 465 aa20.56■□□□□ 0.88
CHMP1A-208ENST00000550102 KIAA0100Q14667 2235 aaKnown RBP20.55■□□□□ 0.88
CHMP1A-208ENST00000550102 A0A1W2PRG0 241 aa20.55■□□□□ 0.88
CHMP1A-208ENST00000550102 USP17L15C9J2P7 530 aa20.55■□□□□ 0.88
CHMP1A-208ENST00000550102 USP17L13C9JLJ4 530 aa20.55■□□□□ 0.88
CHMP1A-208ENST00000550102 USP17L11C9JVI0 530 aa20.55■□□□□ 0.88
CHMP1A-208ENST00000550102 USP17L18D6R9N7 530 aa20.55■□□□□ 0.88
CHMP1A-208ENST00000550102 USP17L22D6RA61 530 aa20.55■□□□□ 0.88
CHMP1A-208ENST00000550102 USP17L17D6RBQ6 530 aa20.55■□□□□ 0.88
CHMP1A-208ENST00000550102 USP17L19D6RCP7 530 aa20.55■□□□□ 0.88
CHMP1A-208ENST00000550102 USP17L20D6RJB6 530 aa20.55■□□□□ 0.88
CHMP1A-208ENST00000550102 TNPO2O14787 897 aaKnown RBP20.55■□□□□ 0.88
CHMP1A-208ENST00000550102 RASA1P20936 1047 aa20.55■□□□□ 0.88
CHMP1A-208ENST00000550102 USP17L24Q0WX57 530 aa20.55■□□□□ 0.88
CHMP1A-208ENST00000550102 P2RX7Q99572 595 aaKnown RBP20.55■□□□□ 0.88
CHMP1A-208ENST00000550102 KANSL2Q9H9L4 492 aa20.55■□□□□ 0.88
CHMP1A-208ENST00000550102 MORF4L1Q9UBU8 362 aa20.55■□□□□ 0.88
CHMP1A-208ENST00000550102 PLXNB2O15031 1838 aa20.55■□□□□ 0.88
CHMP1A-208ENST00000550102 FOXP2O15409 715 aa20.54■□□□□ 0.88
CHMP1A-208ENST00000550102 SLC3A2P08195 630 aaKnown RBP20.54■□□□□ 0.88
CHMP1A-208ENST00000550102 NMIQ13287 307 aaPredicted RBP20.54■□□□□ 0.88
CHMP1A-208ENST00000550102 MCMDC2Q4G0Z9 681 aa20.54■□□□□ 0.88
CHMP1A-208ENST00000550102 STK11IPQ8N1F8 1099 aa20.54■□□□□ 0.88
CHMP1A-208ENST00000550102 LPAR1Q92633 364 aa20.54■□□□□ 0.88
CHMP1A-208ENST00000550102 RPAP3Q9H6T3 665 aaPredicted RBP20.54■□□□□ 0.88
CHMP1A-208ENST00000550102 COL11A1P12107 1806 aaPredicted RBP20.53■□□□□ 0.88
CHMP1A-208ENST00000550102 PRKCZQ05513 592 aa20.53■□□□□ 0.88
CHMP1A-208ENST00000550102 PPARAQ07869 468 aa20.53■□□□□ 0.88
CHMP1A-208ENST00000550102 NBPF11Q86T75 865 aa20.53■□□□□ 0.88
CHMP1A-208ENST00000550102 RAET1EQ8TD07 263 aa20.53■□□□□ 0.88
CHMP1A-208ENST00000550102 TMX2Q9Y320 296 aa20.53■□□□□ 0.88
CHMP1A-208ENST00000550102 PLIN4Q96Q06 1357 aa20.53■□□□□ 0.88
CHMP1A-208ENST00000550102 CCDC171Q6TFL3 1326 aa20.53■□□□□ 0.88
CHMP1A-208ENST00000550102 PDE4AP27815 886 aa20.52■□□□□ 0.88
CHMP1A-208ENST00000550102 ATP2B2Q01814 1243 aa20.52■□□□□ 0.88
CHMP1A-208ENST00000550102 MLLT1Q03111 559 aaPredicted RBP20.52■□□□□ 0.88
CHMP1A-208ENST00000550102 PDE4BQ07343 736 aa20.52■□□□□ 0.88
CHMP1A-208ENST00000550102 VPS53Q5VIR6 699 aa20.52■□□□□ 0.88
CHMP1A-208ENST00000550102 CATSPERGQ6ZRH7 1159 aa20.52■□□□□ 0.88
CHMP1A-208ENST00000550102 COA7Q96BR5 231 aa20.52■□□□□ 0.88
CHMP1A-208ENST00000550102 ZNF333Q96JL9 665 aa20.52■□□□□ 0.88
CHMP1A-208ENST00000550102 TANGO6Q9C0B7 1094 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms