RNA–Protein interactions for RNA: ENST00000549915.5

RAB5B-207, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 494 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-207ENST00000549915 ZNF397Q8NF99 534 aaPredicted RBP4.48□□□□□ -1.69
RAB5B-207ENST00000549915 SNX29Q8TEQ0 813 aa4.48□□□□□ -1.69
RAB5B-207ENST00000549915 EDEM1Q92611 657 aa4.48□□□□□ -1.69
RAB5B-207ENST00000549915 NSUN5Q96P11 429 aaKnown RBP4.48□□□□□ -1.69
RAB5B-207ENST00000549915 GGNBP2Q9H3C7 697 aa4.48□□□□□ -1.69
RAB5B-207ENST00000549915 TTC12Q9H892 705 aaPredicted RBP4.48□□□□□ -1.69
RAB5B-207ENST00000549915 CALCOCO1Q9P1Z2 691 aa4.48□□□□□ -1.69
RAB5B-207ENST00000549915 CTNNA3Q9UI47 895 aa4.48□□□□□ -1.69
RAB5B-207ENST00000549915 MORC2Q9Y6X9 1032 aaPredicted RBP4.48□□□□□ -1.69
RAB5B-207ENST00000549915 ERCC6L2Q5T890 1561 aa4.48□□□□□ -1.69
RAB5B-207ENST00000549915 RAD50Q92878 1312 aa4.47□□□□□ -1.69
RAB5B-207ENST00000549915 CRYBG1Q9Y4K1 1723 aa4.47□□□□□ -1.69
RAB5B-207ENST00000549915 CHD2O14647 1828 aaKnown RBP4.47□□□□□ -1.69
RAB5B-207ENST00000549915 AK9Q5TCS8 1911 aa4.47□□□□□ -1.69
RAB5B-207ENST00000549915 ZBTB42B2RXF5 422 aa4.47□□□□□ -1.69
RAB5B-207ENST00000549915 PATL2C9JE40 543 aaKnown RBP4.47□□□□□ -1.69
RAB5B-207ENST00000549915 STX6O43752 255 aa4.47□□□□□ -1.69
RAB5B-207ENST00000549915 F13A1P00488 732 aa4.47□□□□□ -1.69
RAB5B-207ENST00000549915 PDGFAP04085 211 aa4.47□□□□□ -1.69
RAB5B-207ENST00000549915 TUBB4AP04350 444 aa4.47□□□□□ -1.69
RAB5B-207ENST00000549915 ITGB2P05107 769 aa4.47□□□□□ -1.69
RAB5B-207ENST00000549915 EDN3P14138 238 aa4.47□□□□□ -1.69
RAB5B-207ENST00000549915 PTPRAP18433 802 aa4.47□□□□□ -1.69
RAB5B-207ENST00000549915 CDK11BP21127 795 aaKnown RBP4.47□□□□□ -1.69
RAB5B-207ENST00000549915 CES1P23141 567 aa4.47□□□□□ -1.69
RAB5B-207ENST00000549915 MPSTP25325 297 aa4.47□□□□□ -1.69
RAB5B-207ENST00000549915 CHMLP26374 656 aa4.47□□□□□ -1.69
RAB5B-207ENST00000549915 HSPA4P34932 840 aa4.47□□□□□ -1.69
RAB5B-207ENST00000549915 MLLT1Q03111 559 aaPredicted RBP4.47□□□□□ -1.69
RAB5B-207ENST00000549915 DNM1Q05193 864 aaKnown RBP4.47□□□□□ -1.69
RAB5B-207ENST00000549915 ADGRE1Q14246 886 aa4.47□□□□□ -1.69
RAB5B-207ENST00000549915 GRIK5Q16478 980 aa4.47□□□□□ -1.69
RAB5B-207ENST00000549915 C8orf86Q6ZUL3 223 aa4.47□□□□□ -1.69
RAB5B-207ENST00000549915 DMRTC2Q8IXT2 367 aaPredicted RBP4.47□□□□□ -1.69
RAB5B-207ENST00000549915 TSPYL6Q8N831 410 aa4.47□□□□□ -1.69
RAB5B-207ENST00000549915 CCDC112Q8NEF3 446 aa4.47□□□□□ -1.69
RAB5B-207ENST00000549915 WNT8BQ93098 351 aa4.47□□□□□ -1.69
RAB5B-207ENST00000549915 ZSCAN31Q96LW9 406 aaPredicted RBP4.47□□□□□ -1.69
RAB5B-207ENST00000549915 TIGD1Q96MW7 591 aa4.47□□□□□ -1.69
RAB5B-207ENST00000549915 CITED4Q96RK1 184 aa4.47□□□□□ -1.69
RAB5B-207ENST00000549915 MRPL18Q9H0U6 180 aaKnown RBP4.47□□□□□ -1.69
RAB5B-207ENST00000549915 KCNF1Q9H3M0 494 aa4.47□□□□□ -1.69
RAB5B-207ENST00000549915 SH2B1Q9NRF2 756 aaPredicted RBP4.47□□□□□ -1.69
RAB5B-207ENST00000549915 KCND1Q9NSA2 647 aa4.47□□□□□ -1.69
RAB5B-207ENST00000549915 DDX19AQ9NUU7 478 aaKnown RBP4.47□□□□□ -1.69
RAB5B-207ENST00000549915 SLC52A1Q9NWF4 448 aa4.47□□□□□ -1.69
RAB5B-207ENST00000549915 SLAIN2Q9P270 581 aa4.47□□□□□ -1.69
RAB5B-207ENST00000549915 USP21Q9UK80 565 aa4.47□□□□□ -1.69
RAB5B-207ENST00000549915 USP20Q9Y2K6 914 aa4.47□□□□□ -1.69
RAB5B-207ENST00000549915 SPATA31D1Q6ZQQ2 1576 aa4.47□□□□□ -1.69
RAB5B-207ENST00000549915 MON2Q7Z3U7 1717 aa4.46□□□□□ -1.69
RAB5B-207ENST00000549915 PREX1Q8TCU6 1659 aa4.46□□□□□ -1.7
RAB5B-207ENST00000549915 NDUFB5O43674 189 aa4.46□□□□□ -1.7
RAB5B-207ENST00000549915 HTATSF1O43719 755 aaKnown RBP4.46□□□□□ -1.7
RAB5B-207ENST00000549915 ADAM23O75077 832 aa4.46□□□□□ -1.7
RAB5B-207ENST00000549915 GADD45BO75293 160 aaPredicted RBP4.46□□□□□ -1.7
RAB5B-207ENST00000549915 ABL1P00519 1130 aa4.46□□□□□ -1.7
RAB5B-207ENST00000549915 GNAI2P04899 355 aa4.46□□□□□ -1.7
RAB5B-207ENST00000549915 GNAI3P08754 354 aa4.46□□□□□ -1.7
RAB5B-207ENST00000549915 PDCP20941 246 aa4.46□□□□□ -1.7
RAB5B-207ENST00000549915 U2AF2P26368 475 aaKnown RBP eCLIP4.46□□□□□ -1.77e-6■■□□□ 14.4
RAB5B-207ENST00000549915 IL13P35225 146 aa4.46□□□□□ -1.7
RAB5B-207ENST00000549915 KCNJ6P48051 423 aa4.46□□□□□ -1.7
RAB5B-207ENST00000549915 MBTPS1Q14703 1052 aa4.46□□□□□ -1.7
RAB5B-207ENST00000549915 MAP3K11Q16584 847 aa4.46□□□□□ -1.7
RAB5B-207ENST00000549915 TMEM132EQ6IEE7 984 aa4.46□□□□□ -1.7
RAB5B-207ENST00000549915 RBM43Q6ZSC3 357 aaKnown RBP4.46□□□□□ -1.7
RAB5B-207ENST00000549915 CAPN12Q6ZSI9 719 aa4.46□□□□□ -1.7
RAB5B-207ENST00000549915 GLYCTKQ8IVS8 523 aa4.46□□□□□ -1.7
RAB5B-207ENST00000549915 KLHL23Q8NBE8 558 aa4.46□□□□□ -1.7
RAB5B-207ENST00000549915 TDRD7Q8NHU6 1098 aaKnown RBP4.46□□□□□ -1.7
RAB5B-207ENST00000549915 KIF18AQ8NI77 898 aa4.46□□□□□ -1.7
RAB5B-207ENST00000549915 IPO4Q8TEX9 1081 aaKnown RBP4.46□□□□□ -1.7
RAB5B-207ENST00000549915 RTF1Q92541 710 aaKnown RBP4.46□□□□□ -1.7
RAB5B-207ENST00000549915 ERO1AQ96HE7 468 aa4.46□□□□□ -1.7
RAB5B-207ENST00000549915 TTC14Q96N46 770 aa4.46□□□□□ -1.7
RAB5B-207ENST00000549915 DNAJC2Q99543 621 aaKnown RBP4.46□□□□□ -1.7
RAB5B-207ENST00000549915 ARID3AQ99856 593 aa4.46□□□□□ -1.7
RAB5B-207ENST00000549915 PBX4Q9BYU1 374 aa4.46□□□□□ -1.7
RAB5B-207ENST00000549915 TM6SF1Q9BZW5 370 aa4.46□□□□□ -1.7
RAB5B-207ENST00000549915 LRRCC1Q9C099 1032 aa4.46□□□□□ -1.7
RAB5B-207ENST00000549915 NUP62CLQ9H1M0 184 aa4.46□□□□□ -1.7
RAB5B-207ENST00000549915 ANO2Q9NQ90 1003 aa4.46□□□□□ -1.7
RAB5B-207ENST00000549915 FAM53CQ9NYF3 392 aa4.46□□□□□ -1.7
RAB5B-207ENST00000549915 POLKQ9UBT6 870 aa4.46□□□□□ -1.7
RAB5B-207ENST00000549915 PYCARDQ9ULZ3 195 aa4.46□□□□□ -1.7
RAB5B-207ENST00000549915 LIMCH1Q9UPQ0 1083 aa4.46□□□□□ -1.7
RAB5B-207ENST00000549915 SMC3Q9UQE7 1217 aa4.46□□□□□ -1.7
RAB5B-207ENST00000549915 PPME1Q9Y570 386 aa4.46□□□□□ -1.7
RAB5B-207ENST00000549915 DLG5Q8TDM6 1919 aa4.46□□□□□ -1.7
RAB5B-207ENST00000549915 SIGLEC1Q9BZZ2 1709 aa4.46□□□□□ -1.7
RAB5B-207ENST00000549915 TMEM131LA2VDJ0 1609 aa4.46□□□□□ -1.7
RAB5B-207ENST00000549915 NPHP3Q7Z494 1330 aa4.46□□□□□ -1.7
RAB5B-207ENST00000549915 FAM208AQ9UK61 1670 aaKnown RBP4.45□□□□□ -1.7
RAB5B-207ENST00000549915 CHL1O00533 1208 aa4.45□□□□□ -1.7
RAB5B-207ENST00000549915 ZBTB39O15060 712 aa4.45□□□□□ -1.7
RAB5B-207ENST00000549915 ICMTO60725 284 aa4.45□□□□□ -1.7
RAB5B-207ENST00000549915 RAB11FIP3O75154 756 aa4.45□□□□□ -1.7
RAB5B-207ENST00000549915 PHACTR2O75167 634 aa4.45□□□□□ -1.7
RAB5B-207ENST00000549915 H2AFB1P0C5Y9 115 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms