RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 GABRQQ9UN88 632 aa11.75□□□□□ -0.53
HDAC7-229ENST00000549883 RLFQ13129 1914 aa11.75□□□□□ -0.53
HDAC7-229ENST00000549883 PLXNB2O15031 1838 aa11.74□□□□□ -0.53
HDAC7-229ENST00000549883 MINDY4BA8MYZ0 360 aa11.74□□□□□ -0.53
HDAC7-229ENST00000549883 C19orf81C9J6K1 198 aa11.74□□□□□ -0.53
HDAC7-229ENST00000549883 MYCP01106 439 aaPredicted RBP11.74□□□□□ -0.53
HDAC7-229ENST00000549883 ZFYP08048 801 aaPredicted RBP11.74□□□□□ -0.53
HDAC7-229ENST00000549883 PDE4AP27815 886 aa11.74□□□□□ -0.53
HDAC7-229ENST00000549883 VPS53Q5VIR6 699 aa11.74□□□□□ -0.53
HDAC7-229ENST00000549883 USP17L2Q6R6M4 530 aa11.74□□□□□ -0.53
HDAC7-229ENST00000549883 SH3TC2Q8TF17 1288 aa11.74□□□□□ -0.53
HDAC7-229ENST00000549883 FAM227BQ96M60 508 aa11.74□□□□□ -0.53
HDAC7-229ENST00000549883 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.74□□□□□ -0.53
HDAC7-229ENST00000549883 TXNRD2Q9NNW7 524 aa11.74□□□□□ -0.53
HDAC7-229ENST00000549883 CABP5Q9NP86 173 aa11.74□□□□□ -0.53
HDAC7-229ENST00000549883 TMOD4Q9NZQ9 345 aa11.74□□□□□ -0.53
HDAC7-229ENST00000549883 A0A0D9SFI3 127 aa11.73□□□□□ -0.53
HDAC7-229ENST00000549883 POTEFA5A3E0 1075 aa11.73□□□□□ -0.53
HDAC7-229ENST00000549883 FMNL1O95466 1100 aaPredicted RBP11.73□□□□□ -0.53
HDAC7-229ENST00000549883 APPP05067 770 aa11.73□□□□□ -0.53
HDAC7-229ENST00000549883 HOXA7P31268 230 aaPredicted RBP11.73□□□□□ -0.53
HDAC7-229ENST00000549883 PRKCZQ05513 592 aa11.73□□□□□ -0.53
HDAC7-229ENST00000549883 KIF22Q14807 665 aa11.73□□□□□ -0.53
HDAC7-229ENST00000549883 PARP14Q460N5 1801 aa11.73□□□□□ -0.53
HDAC7-229ENST00000549883 SBK1Q52WX2 424 aa11.73□□□□□ -0.53
HDAC7-229ENST00000549883 IFNL3Q8IZI9 196 aa11.73□□□□□ -0.53
HDAC7-229ENST00000549883 EVI5LQ96CN4 794 aa11.73□□□□□ -0.53
HDAC7-229ENST00000549883 FEZ1Q99689 392 aa11.73□□□□□ -0.53
HDAC7-229ENST00000549883 SRRDQ9UH36 339 aa11.73□□□□□ -0.53
HDAC7-229ENST00000549883 TACC3Q9Y6A5 838 aa11.73□□□□□ -0.53
HDAC7-229ENST00000549883 MYH4Q9Y623 1939 aa11.72□□□□□ -0.53
HDAC7-229ENST00000549883 PATL2C9JE40 543 aaKnown RBP11.72□□□□□ -0.53
HDAC7-229ENST00000549883 PRDM1O75626 825 aa11.72□□□□□ -0.53
HDAC7-229ENST00000549883 VCAM1P19320 739 aa11.72□□□□□ -0.53
HDAC7-229ENST00000549883 RASA1P20936 1047 aa11.72□□□□□ -0.53
HDAC7-229ENST00000549883 RGS19P49795 217 aa11.72□□□□□ -0.53
HDAC7-229ENST00000549883 HERVK_113P62684 666 aa11.72□□□□□ -0.53
HDAC7-229ENST00000549883 IRX3P78415 501 aaPredicted RBP11.72□□□□□ -0.53
HDAC7-229ENST00000549883 NMIQ13287 307 aaPredicted RBP11.72□□□□□ -0.53
HDAC7-229ENST00000549883 Q3C1V9 767 aa11.72□□□□□ -0.53
HDAC7-229ENST00000549883 ARMC5Q96C12 935 aa11.72□□□□□ -0.53
HDAC7-229ENST00000549883 C12orf42Q96LP6 360 aa11.72□□□□□ -0.53
HDAC7-229ENST00000549883 KIAA1683Q9H0B3 1180 aa11.72□□□□□ -0.53
HDAC7-229ENST00000549883 INCENPQ9NQS7 918 aa11.72□□□□□ -0.53
HDAC7-229ENST00000549883 RBPJLQ9UBG7 517 aa11.72□□□□□ -0.53
HDAC7-229ENST00000549883 ARPP21Q9UBL0 812 aaPredicted RBP11.72□□□□□ -0.53
HDAC7-229ENST00000549883 SWAP70Q9UH65 585 aa11.72□□□□□ -0.53
HDAC7-229ENST00000549883 ROBO3Q96MS0 1386 aa11.71□□□□□ -0.53
HDAC7-229ENST00000549883 MYPNQ86TC9 1320 aa11.71□□□□□ -0.53
HDAC7-229ENST00000549883 TRIM6-TRIM34B2RNG4 842 aa11.71□□□□□ -0.53
HDAC7-229ENST00000549883 CNMDO75829 334 aa11.71□□□□□ -0.53
HDAC7-229ENST00000549883 TDO2P48775 406 aa11.71□□□□□ -0.53
HDAC7-229ENST00000549883 FCGRTP55899 365 aa11.71□□□□□ -0.53
HDAC7-229ENST00000549883 FAM110CQ1W6H9 321 aa11.71□□□□□ -0.53
HDAC7-229ENST00000549883 TMEM179Q6ZVK1 233 aa11.71□□□□□ -0.53
HDAC7-229ENST00000549883 ZNF589Q86UQ0 364 aaPredicted RBP11.71□□□□□ -0.53
HDAC7-229ENST00000549883 RILPL2Q969X0 211 aa11.71□□□□□ -0.53
HDAC7-229ENST00000549883 DDRGK1Q96HY6 314 aa11.71□□□□□ -0.53
HDAC7-229ENST00000549883 PNMA3Q9UL41 463 aa11.71□□□□□ -0.53
HDAC7-229ENST00000549883 COL11A1P12107 1806 aaPredicted RBP11.71□□□□□ -0.54
HDAC7-229ENST00000549883 RBBP6Q7Z6E9 1792 aaKnown RBP11.71□□□□□ -0.54
HDAC7-229ENST00000549883 EEF2P13639 858 aaKnown RBP11.7□□□□□ -0.54
HDAC7-229ENST00000549883 GNAT2P19087 354 aa11.7□□□□□ -0.54
HDAC7-229ENST00000549883 GCLCP48506 637 aaPredicted RBP11.7□□□□□ -0.54
HDAC7-229ENST00000549883 ATP2B2Q01814 1243 aa11.7□□□□□ -0.54
HDAC7-229ENST00000549883 ICA1Q05084 483 aa11.7□□□□□ -0.54
HDAC7-229ENST00000549883 CTDSPL2Q05D32 466 aa11.7□□□□□ -0.54
HDAC7-229ENST00000549883 PABPC4Q13310 644 aaKnown RBP eCLIP11.7□□□□□ -0.54
HDAC7-229ENST00000549883 MTFR1Q15390 333 aa11.7□□□□□ -0.54
HDAC7-229ENST00000549883 SLC9C1Q4G0N8 1177 aa11.7□□□□□ -0.54
HDAC7-229ENST00000549883 GIMAP6Q6P9H5 292 aa11.7□□□□□ -0.54
HDAC7-229ENST00000549883 CATSPERGQ6ZRH7 1159 aa11.7□□□□□ -0.54
HDAC7-229ENST00000549883 AMOTL1Q8IY63 956 aa11.7□□□□□ -0.54
HDAC7-229ENST00000549883 SPICE1Q8N0Z3 855 aa11.7□□□□□ -0.54
HDAC7-229ENST00000549883 ZNF333Q96JL9 665 aa11.7□□□□□ -0.54
HDAC7-229ENST00000549883 PAGR1Q9BTK6 254 aa11.7□□□□□ -0.54
HDAC7-229ENST00000549883 PORCNQ9H237 461 aa11.7□□□□□ -0.54
HDAC7-229ENST00000549883 OSBPL3Q9H4L5 887 aa11.7□□□□□ -0.54
HDAC7-229ENST00000549883 RPAP3Q9H6T3 665 aaPredicted RBP11.7□□□□□ -0.54
HDAC7-229ENST00000549883 MORF4L1Q9UBU8 362 aa11.7□□□□□ -0.54
HDAC7-229ENST00000549883 BRCA2P51587 3418 aa11.69□□□□□ -0.54
HDAC7-229ENST00000549883 USP17L15C9J2P7 530 aa11.69□□□□□ -0.54
HDAC7-229ENST00000549883 USP17L13C9JLJ4 530 aa11.69□□□□□ -0.54
HDAC7-229ENST00000549883 USP17L11C9JVI0 530 aa11.69□□□□□ -0.54
HDAC7-229ENST00000549883 USP17L18D6R9N7 530 aa11.69□□□□□ -0.54
HDAC7-229ENST00000549883 USP17L22D6RA61 530 aa11.69□□□□□ -0.54
HDAC7-229ENST00000549883 USP17L17D6RBQ6 530 aa11.69□□□□□ -0.54
HDAC7-229ENST00000549883 USP17L19D6RCP7 530 aa11.69□□□□□ -0.54
HDAC7-229ENST00000549883 USP17L20D6RJB6 530 aa11.69□□□□□ -0.54
HDAC7-229ENST00000549883 TNPO2O14787 897 aaKnown RBP11.69□□□□□ -0.54
HDAC7-229ENST00000549883 GNRH1P01148 92 aa11.69□□□□□ -0.54
HDAC7-229ENST00000549883 ELNP15502 786 aa11.69□□□□□ -0.54
HDAC7-229ENST00000549883 SDSP20132 328 aa11.69□□□□□ -0.54
HDAC7-229ENST00000549883 FLT3LGP49771 235 aa11.69□□□□□ -0.54
HDAC7-229ENST00000549883 USP17L24Q0WX57 530 aa11.69□□□□□ -0.54
HDAC7-229ENST00000549883 ARHGEF6Q15052 776 aa11.69□□□□□ -0.54
HDAC7-229ENST00000549883 LRRFIP1Q32MZ4 808 aaKnown RBP11.69□□□□□ -0.54
HDAC7-229ENST00000549883 SKAP1Q86WV1 359 aa11.69□□□□□ -0.54
HDAC7-229ENST00000549883 NKX2-3Q8TAU0 364 aa11.69□□□□□ -0.54
HDAC7-229ENST00000549883 CCDC17Q96LX7 622 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 314.8 ms