RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 NID2Q14112 1375 aa20.35■□□□□ 0.85
LETMD1-220ENST00000549686 CCDC196A0A1B0GTZ2 297 aa20.35■□□□□ 0.85
LETMD1-220ENST00000549686 TOP1P11387 765 aaKnown RBP20.35■□□□□ 0.85
LETMD1-220ENST00000549686 RCSD1Q6JBY9 416 aa20.35■□□□□ 0.85
LETMD1-220ENST00000549686 MIGA2Q7L4E1 593 aa20.35■□□□□ 0.85
LETMD1-220ENST00000549686 CEP95Q96GE4 821 aa20.35■□□□□ 0.85
LETMD1-220ENST00000549686 MAP3K14Q99558 947 aa20.35■□□□□ 0.85
LETMD1-220ENST00000549686 RRAGCQ9HB90 399 aa20.35■□□□□ 0.85
LETMD1-220ENST00000549686 NAP1L2Q9ULW6 460 aaPredicted RBP20.35■□□□□ 0.85
LETMD1-220ENST00000549686 SYNPO2Q9UMS6 1093 aa20.35■□□□□ 0.85
LETMD1-220ENST00000549686 STX8Q9UNK0 236 aa20.35■□□□□ 0.85
LETMD1-220ENST00000549686 NMT2O60551 498 aa20.34■□□□□ 0.85
LETMD1-220ENST00000549686 ASNSP08243 561 aa20.34■□□□□ 0.85
LETMD1-220ENST00000549686 NF2P35240 595 aa20.34■□□□□ 0.85
LETMD1-220ENST00000549686 CAP2P40123 477 aa20.34■□□□□ 0.85
LETMD1-220ENST00000549686 LDHDQ86WU2 507 aa20.34■□□□□ 0.85
LETMD1-220ENST00000549686 ZNF654Q8IZM8 581 aa20.34■□□□□ 0.85
LETMD1-220ENST00000549686 LLPHQ9BRT6 129 aaKnown RBP20.34■□□□□ 0.85
LETMD1-220ENST00000549686 NYAP2Q9P242 653 aa20.34■□□□□ 0.85
LETMD1-220ENST00000549686 SCAF8Q9UPN6 1271 aaKnown RBP20.34■□□□□ 0.85
LETMD1-220ENST00000549686 PHF20L1A8MW92 1017 aa20.33■□□□□ 0.85
LETMD1-220ENST00000549686 CTNND1O60716 968 aaKnown RBP20.33■□□□□ 0.85
LETMD1-220ENST00000549686 LARGE1O95461 756 aa20.33■□□□□ 0.85
LETMD1-220ENST00000549686 METAP2P50579 478 aaKnown RBP eCLIP20.33■□□□□ 0.85
LETMD1-220ENST00000549686 CPLX2Q6PUV4 134 aaKnown RBP20.33■□□□□ 0.85
LETMD1-220ENST00000549686 SENP2Q9HC62 589 aa20.33■□□□□ 0.85
LETMD1-220ENST00000549686 CWC22Q9HCG8 908 aaKnown RBP20.33■□□□□ 0.85
LETMD1-220ENST00000549686 ZNF112Q9UJU3 913 aa20.33■□□□□ 0.85
LETMD1-220ENST00000549686 ZBTB21Q9ULJ3 1066 aa20.33■□□□□ 0.85
LETMD1-220ENST00000549686 CLEC11AQ9Y240 323 aa20.33■□□□□ 0.85
LETMD1-220ENST00000549686 GOLGA8AA7E2F4 631 aa20.32■□□□□ 0.84
LETMD1-220ENST00000549686 ADM5C9JUS6 153 aa20.32■□□□□ 0.84
LETMD1-220ENST00000549686 PPP1R12BO60237 982 aaPredicted RBP20.32■□□□□ 0.84
LETMD1-220ENST00000549686 GDF11O95390 407 aa20.32■□□□□ 0.84
LETMD1-220ENST00000549686 GH2P01242 217 aa20.32■□□□□ 0.84
LETMD1-220ENST00000549686 SLC4A3P48751 1232 aa20.32■□□□□ 0.84
LETMD1-220ENST00000549686 ICA1Q05084 483 aa20.32■□□□□ 0.84
LETMD1-220ENST00000549686 SCRN1Q12765 414 aa20.32■□□□□ 0.84
LETMD1-220ENST00000549686 STK3Q13188 491 aa20.32■□□□□ 0.84
LETMD1-220ENST00000549686 USP48Q86UV5 1035 aa20.32■□□□□ 0.84
LETMD1-220ENST00000549686 MICU3Q86XE3 530 aa20.32■□□□□ 0.84
LETMD1-220ENST00000549686 CCDC83Q8IWF9 413 aa20.32■□□□□ 0.84
LETMD1-220ENST00000549686 PNMA1Q8ND90 353 aa20.32■□□□□ 0.84
LETMD1-220ENST00000549686 MKL1Q969V6 931 aa20.32■□□□□ 0.84
LETMD1-220ENST00000549686 TMEM47Q9BQJ4 181 aa20.32■□□□□ 0.84
LETMD1-220ENST00000549686 RBM28Q9NW13 759 aaKnown RBP20.32■□□□□ 0.84
LETMD1-220ENST00000549686 HPS5Q9UPZ3 1129 aa20.32■□□□□ 0.84
LETMD1-220ENST00000549686 CDKL5O76039 1030 aa20.31■□□□□ 0.84
LETMD1-220ENST00000549686 SLURP2P0DP57 97 aa20.31■□□□□ 0.84
LETMD1-220ENST00000549686 KIF5BP33176 963 aa20.31■□□□□ 0.84
LETMD1-220ENST00000549686 TROAPQ12815 778 aa20.31■□□□□ 0.84
LETMD1-220ENST00000549686 NECAB1Q8N987 351 aa20.31■□□□□ 0.84
LETMD1-220ENST00000549686 CPLX1O14810 134 aa20.3■□□□□ 0.84
LETMD1-220ENST00000549686 RRP1BQ14684 758 aaKnown RBP20.3■□□□□ 0.84
LETMD1-220ENST00000549686 SEPT2Q15019 361 aa20.3■□□□□ 0.84
LETMD1-220ENST00000549686 RAB3GAP1Q15042 981 aa20.3■□□□□ 0.84
LETMD1-220ENST00000549686 RTN1Q16799 776 aa20.3■□□□□ 0.84
LETMD1-220ENST00000549686 FANCBQ8NB91 859 aa20.3■□□□□ 0.84
LETMD1-220ENST00000549686 CTCFLQ8NI51 663 aaPredicted RBP20.3■□□□□ 0.84
LETMD1-220ENST00000549686 CDCA5Q96FF9 252 aa20.3■□□□□ 0.84
LETMD1-220ENST00000549686 SH2D4AQ9H788 454 aa20.3■□□□□ 0.84
LETMD1-220ENST00000549686 ARHGEF10LQ9HCE6 1279 aa20.3■□□□□ 0.84
LETMD1-220ENST00000549686 CLIP2Q9UDT6 1046 aa20.3■□□□□ 0.84
LETMD1-220ENST00000549686 GUCY1A2P33402 732 aa20.29■□□□□ 0.84
LETMD1-220ENST00000549686 GNAQP50148 359 aa20.29■□□□□ 0.84
LETMD1-220ENST00000549686 HMGN5P82970 282 aaKnown RBP20.29■□□□□ 0.84
LETMD1-220ENST00000549686 ST3GAL1Q11201 340 aa20.29■□□□□ 0.84
LETMD1-220ENST00000549686 PRAMEF18Q5VWM3 479 aa20.29■□□□□ 0.84
LETMD1-220ENST00000549686 NUP133Q8WUM0 1156 aa20.29■□□□□ 0.84
LETMD1-220ENST00000549686 KLRG1Q96E93 195 aa20.29■□□□□ 0.84
LETMD1-220ENST00000549686 SMC3Q9UQE7 1217 aa20.29■□□□□ 0.84
LETMD1-220ENST00000549686 KIF3AQ9Y496 699 aa20.29■□□□□ 0.84
LETMD1-220ENST00000549686 MYH8P13535 1937 aa20.29■□□□□ 0.84
LETMD1-220ENST00000549686 GREB1LQ9C091 1923 aaPredicted RBP20.29■□□□□ 0.84
LETMD1-220ENST00000549686 EEF2P13639 858 aaKnown RBP20.28■□□□□ 0.84
LETMD1-220ENST00000549686 PDIA4P13667 645 aaKnown RBP20.28■□□□□ 0.84
LETMD1-220ENST00000549686 IREB2P48200 963 aaKnown RBP20.28■□□□□ 0.84
LETMD1-220ENST00000549686 CCT2P78371 535 aaKnown RBP20.28■□□□□ 0.84
LETMD1-220ENST00000549686 NOL9Q5SY16 702 aaKnown RBP20.28■□□□□ 0.84
LETMD1-220ENST00000549686 SCYL3Q8IZE3 742 aa20.28■□□□□ 0.84
LETMD1-220ENST00000549686 WRNIP1Q96S55 665 aa20.28■□□□□ 0.84
LETMD1-220ENST00000549686 GLIS2Q9BZE0 524 aaPredicted RBP20.28■□□□□ 0.84
LETMD1-220ENST00000549686 NMRK2Q9NPI5 230 aa20.28■□□□□ 0.84
LETMD1-220ENST00000549686 SSC5DA1L4H1 1573 aa20.28■□□□□ 0.84
LETMD1-220ENST00000549686 ATP2B2Q01814 1243 aa20.27■□□□□ 0.84
LETMD1-220ENST00000549686 GRM4Q14833 912 aa20.27■□□□□ 0.84
LETMD1-220ENST00000549686 LZTS2Q9BRK4 669 aa20.27■□□□□ 0.84
LETMD1-220ENST00000549686 MYL10Q9BUA6 226 aa20.27■□□□□ 0.84
LETMD1-220ENST00000549686 PICK1Q9NRD5 415 aa20.27■□□□□ 0.84
LETMD1-220ENST00000549686 UNCXA6NJT0 531 aa20.26■□□□□ 0.83
LETMD1-220ENST00000549686 USP2O75604 605 aaPredicted RBP20.26■□□□□ 0.83
LETMD1-220ENST00000549686 JAG1P78504 1218 aa20.26■□□□□ 0.83
LETMD1-220ENST00000549686 MAP3K9P80192 1104 aa20.26■□□□□ 0.83
LETMD1-220ENST00000549686 MAP3K11Q16584 847 aa20.26■□□□□ 0.83
LETMD1-220ENST00000549686 GMCL1P1Q8NEA9 526 aa20.26■□□□□ 0.83
LETMD1-220ENST00000549686 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.26■□□□□ 0.83
LETMD1-220ENST00000549686 SMARCC2Q8TAQ2 1214 aa20.26■□□□□ 0.83
LETMD1-220ENST00000549686 AS3MTQ9HBK9 375 aa20.26■□□□□ 0.83
LETMD1-220ENST00000549686 NCOA5Q9HCD5 579 aaKnown RBP20.26■□□□□ 0.83
LETMD1-220ENST00000549686 CIZ1Q9ULV3 898 aaPredicted RBP20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms