RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 RPGRQ92834 1020 aaKnown RBP12.7□□□□□ -0.38
LINC00661-204ENST00000549354 CCDC34Q96HJ3 373 aa12.7□□□□□ -0.38
LINC00661-204ENST00000549354 BRIP1Q9BX63 1249 aa12.7□□□□□ -0.38
LINC00661-204ENST00000549354 NID2Q14112 1375 aa12.7□□□□□ -0.38
LINC00661-204ENST00000549354 TDO2P48775 406 aa12.7□□□□□ -0.38
LINC00661-204ENST00000549354 TMEM67Q5HYA8 995 aa12.7□□□□□ -0.38
LINC00661-204ENST00000549354 AKNAD1Q5T1N1 836 aa12.7□□□□□ -0.38
LINC00661-204ENST00000549354 SARM1Q6SZW1 724 aa12.7□□□□□ -0.38
LINC00661-204ENST00000549354 SGMS1Q86VZ5 419 aa12.7□□□□□ -0.38
LINC00661-204ENST00000549354 RAI14Q9P0K7 980 aa12.7□□□□□ -0.38
LINC00661-204ENST00000549354 NEDD4P46934 1319 aa12.7□□□□□ -0.38
LINC00661-204ENST00000549354 FGRP09769 529 aa12.7□□□□□ -0.38
LINC00661-204ENST00000549354 CDC27P30260 824 aa12.7□□□□□ -0.38
LINC00661-204ENST00000549354 GYS2P54840 703 aa12.7□□□□□ -0.38
LINC00661-204ENST00000549354 UBASH3AP57075 661 aa12.7□□□□□ -0.38
LINC00661-204ENST00000549354 USP49Q70CQ1 688 aa12.7□□□□□ -0.38
LINC00661-204ENST00000549354 SDR42E1Q8WUS8 393 aa12.7□□□□□ -0.38
LINC00661-204ENST00000549354 ZCCHC17Q9NP64 241 aaKnown RBP12.7□□□□□ -0.38
LINC00661-204ENST00000549354 TFCP2L1Q9NZI6 479 aa12.7□□□□□ -0.38
LINC00661-204ENST00000549354 ANGEL1Q9UNK9 670 aaKnown RBP12.7□□□□□ -0.38
LINC00661-204ENST00000549354 VGLL3A8MV65 326 aa12.69□□□□□ -0.38
LINC00661-204ENST00000549354 ATP2B4P23634 1241 aa12.69□□□□□ -0.38
LINC00661-204ENST00000549354 LIFRP42702 1097 aa12.69□□□□□ -0.38
LINC00661-204ENST00000549354 FANCCQ00597 558 aa12.69□□□□□ -0.38
LINC00661-204ENST00000549354 TRIM29Q14134 588 aa12.69□□□□□ -0.38
LINC00661-204ENST00000549354 MYSM1Q5VVJ2 828 aa12.69□□□□□ -0.38
LINC00661-204ENST00000549354 ADALQ6DHV7 355 aa12.69□□□□□ -0.38
LINC00661-204ENST00000549354 COL23A1Q86Y22 540 aaPredicted RBP12.69□□□□□ -0.38
LINC00661-204ENST00000549354 CNNM3Q8NE01 707 aa12.69□□□□□ -0.38
LINC00661-204ENST00000549354 ERO1AQ96HE7 468 aa12.69□□□□□ -0.38
LINC00661-204ENST00000549354 KRT23Q9C075 422 aa12.69□□□□□ -0.38
LINC00661-204ENST00000549354 FANCLQ9NW38 375 aa12.69□□□□□ -0.38
LINC00661-204ENST00000549354 CCDC88AQ3V6T2 1871 aa12.69□□□□□ -0.38
LINC00661-204ENST00000549354 FAM205CA6NFA0 338 aa12.69□□□□□ -0.38
LINC00661-204ENST00000549354 GOLGA8AA7E2F4 631 aa12.69□□□□□ -0.38
LINC00661-204ENST00000549354 APBA3O96018 575 aa12.69□□□□□ -0.38
LINC00661-204ENST00000549354 GPSM2P81274 684 aa12.69□□□□□ -0.38
LINC00661-204ENST00000549354 MECOMQ03112 1051 aa12.69□□□□□ -0.38
LINC00661-204ENST00000549354 TERF2Q15554 542 aa12.69□□□□□ -0.38
LINC00661-204ENST00000549354 MNS1Q8NEH6 495 aa12.69□□□□□ -0.38
LINC00661-204ENST00000549354 CDC25BP30305 580 aa12.68□□□□□ -0.38
LINC00661-204ENST00000549354 SPTY2D1Q68D10 685 aaPredicted RBP12.68□□□□□ -0.38
LINC00661-204ENST00000549354 CARD6Q9BX69 1037 aa12.68□□□□□ -0.38
LINC00661-204ENST00000549354 LZTFL1Q9NQ48 299 aa12.68□□□□□ -0.38
LINC00661-204ENST00000549354 DHX16O60231 1041 aaKnown RBP12.68□□□□□ -0.38
LINC00661-204ENST00000549354 NEMFO60524 1076 aa12.68□□□□□ -0.38
LINC00661-204ENST00000549354 CAVIN2O95810 425 aa12.68□□□□□ -0.38
LINC00661-204ENST00000549354 CLCN6P51797 869 aa12.68□□□□□ -0.38
LINC00661-204ENST00000549354 DHX8Q14562 1220 aaKnown RBP12.68□□□□□ -0.38
LINC00661-204ENST00000549354 TEX35Q5T0J7 233 aa12.68□□□□□ -0.38
LINC00661-204ENST00000549354 FKBP15Q5T1M5 1219 aa12.68□□□□□ -0.38
LINC00661-204ENST00000549354 KRT40Q6A162 431 aa12.68□□□□□ -0.38
LINC00661-204ENST00000549354 WDR66Q8TBY9 1149 aa12.68□□□□□ -0.38
LINC00661-204ENST00000549354 PCP11498 1178 aaKnown RBP12.68□□□□□ -0.38
LINC00661-204ENST00000549354 IL1R1P14778 569 aa12.68□□□□□ -0.38
LINC00661-204ENST00000549354 UBXN4Q92575 508 aa12.68□□□□□ -0.38
LINC00661-204ENST00000549354 ANKIB1Q9P2G1 1089 aa12.68□□□□□ -0.38
LINC00661-204ENST00000549354 MORC2Q9Y6X9 1032 aaPredicted RBP12.68□□□□□ -0.38
LINC00661-204ENST00000549354 MROH7-TTC4A0A0A0MT08 1334 aa12.67□□□□□ -0.38
LINC00661-204ENST00000549354 ANO1Q5XXA6 986 aa12.67□□□□□ -0.38
LINC00661-204ENST00000549354 FBXO18Q8NFZ0 1043 aa12.67□□□□□ -0.38
LINC00661-204ENST00000549354 RNF41Q9H4P4 317 aaPredicted RBP12.67□□□□□ -0.38
LINC00661-204ENST00000549354 LY9Q9HBG7 655 aa12.67□□□□□ -0.38
LINC00661-204ENST00000549354 ZSWIM5Q9P217 1185 aa12.67□□□□□ -0.38
LINC00661-204ENST00000549354 QSER1Q2KHR3 1735 aa12.67□□□□□ -0.38
LINC00661-204ENST00000549354 POLR2DO15514 142 aaKnown RBP12.67□□□□□ -0.38
LINC00661-204ENST00000549354 IARSP41252 1262 aaKnown RBP12.67□□□□□ -0.38
LINC00661-204ENST00000549354 GSDMDP57764 484 aa12.67□□□□□ -0.38
LINC00661-204ENST00000549354 EVX2Q03828 476 aa12.67□□□□□ -0.38
LINC00661-204ENST00000549354 PPARAQ07869 468 aa12.67□□□□□ -0.38
LINC00661-204ENST00000549354 KCTD19Q17RG1 926 aaPredicted RBP12.67□□□□□ -0.38
LINC00661-204ENST00000549354 MFSD6Q6ZSS7 791 aa12.67□□□□□ -0.38
LINC00661-204ENST00000549354 ZNF804AQ7Z570 1209 aa12.67□□□□□ -0.38
LINC00661-204ENST00000549354 SP8Q8IXZ3 490 aa12.67□□□□□ -0.38
LINC00661-204ENST00000549354 RGS17Q9UGC6 210 aaPredicted RBP12.67□□□□□ -0.38
LINC00661-204ENST00000549354 NRDCO43847 1150 aa12.67□□□□□ -0.38
LINC00661-204ENST00000549354 RANBP6O60518 1105 aaKnown RBP12.67□□□□□ -0.38
LINC00661-204ENST00000549354 RCAN1P53805 252 aa12.67□□□□□ -0.38
LINC00661-204ENST00000549354 TPM4P67936 248 aa12.67□□□□□ -0.38
LINC00661-204ENST00000549354 RASSF8Q8NHQ8 419 aa12.67□□□□□ -0.38
LINC00661-204ENST00000549354 RTEL1Q9NZ71 1219 aa12.67□□□□□ -0.38
LINC00661-204ENST00000549354 A0A0U1RQJ8 604 aa12.66□□□□□ -0.38
LINC00661-204ENST00000549354 SLC51AQ86UW1 340 aa12.66□□□□□ -0.38
LINC00661-204ENST00000549354 ATRIPQ8WXE1 791 aa12.66□□□□□ -0.38
LINC00661-204ENST00000549354 CABP5Q9NP86 173 aa12.66□□□□□ -0.38
LINC00661-204ENST00000549354 DYNLL1P63167 89 aaKnown RBP12.66□□□□□ -0.38
LINC00661-204ENST00000549354 DHX58Q96C10 678 aa12.66□□□□□ -0.38
LINC00661-204ENST00000549354 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.66□□□□□ -0.38
LINC00661-204ENST00000549354 SLC12A7Q9Y666 1083 aa12.66□□□□□ -0.38
LINC00661-204ENST00000549354 MYH15Q9Y2K3 1946 aa12.66□□□□□ -0.38
LINC00661-204ENST00000549354 PRDX5P30044 214 aa12.65□□□□□ -0.38
LINC00661-204ENST00000549354 GNG11P61952 73 aa12.65□□□□□ -0.38
LINC00661-204ENST00000549354 SBK1Q52WX2 424 aa12.65□□□□□ -0.38
LINC00661-204ENST00000549354 APOA5Q6Q788 366 aa12.65□□□□□ -0.38
LINC00661-204ENST00000549354 NOL10Q9BSC4 688 aaKnown RBP12.65□□□□□ -0.38
LINC00661-204ENST00000549354 PUF60Q9UHX1 559 aaKnown RBP12.65□□□□□ -0.38
LINC00661-204ENST00000549354 GGA1Q9UJY5 639 aa12.65□□□□□ -0.38
LINC00661-204ENST00000549354 PCDHA5Q9Y5H7 936 aa12.65□□□□□ -0.38
LINC00661-204ENST00000549354 LAMB1P07942 1786 aa12.65□□□□□ -0.38
LINC00661-204ENST00000549354 FANCGO15287 622 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms