RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 CALM1P0DP23 149 aa11.47□□□□□ -0.57
SMARCD1-206ENST00000549274 CALM2P0DP24 149 aa11.47□□□□□ -0.57
SMARCD1-206ENST00000549274 CALM3P0DP25 149 aa11.47□□□□□ -0.57
SMARCD1-206ENST00000549274 LIFRP42702 1097 aa11.47□□□□□ -0.57
SMARCD1-206ENST00000549274 RCAN1P53805 252 aa11.47□□□□□ -0.57
SMARCD1-206ENST00000549274 USP14P54578 494 aa11.47□□□□□ -0.57
SMARCD1-206ENST00000549274 ICA1Q05084 483 aa11.47□□□□□ -0.57
SMARCD1-206ENST00000549274 WTAPQ15007 396 aa11.47□□□□□ -0.57
SMARCD1-206ENST00000549274 PPP2R5BQ15173 497 aa11.47□□□□□ -0.57
SMARCD1-206ENST00000549274 IFIT1BQ5T764 474 aaKnown RBP11.47□□□□□ -0.57
SMARCD1-206ENST00000549274 PRAMEF18Q5VWM3 479 aa11.47□□□□□ -0.57
SMARCD1-206ENST00000549274 ERO1BQ86YB8 467 aa11.47□□□□□ -0.57
SMARCD1-206ENST00000549274 RASEFQ8IZ41 740 aa11.47□□□□□ -0.57
SMARCD1-206ENST00000549274 STK11IPQ8N1F8 1099 aa11.47□□□□□ -0.57
SMARCD1-206ENST00000549274 SLC44A5Q8NCS7 719 aa11.47□□□□□ -0.57
SMARCD1-206ENST00000549274 ZSCAN10Q96SZ4 725 aaPredicted RBP11.47□□□□□ -0.57
SMARCD1-206ENST00000549274 ALDH8A1Q9H2A2 487 aaPredicted RBP11.47□□□□□ -0.57
SMARCD1-206ENST00000549274 NYAP2Q9P242 653 aa11.47□□□□□ -0.57
SMARCD1-206ENST00000549274 SPDYE4A6NLX3 237 aa11.46□□□□□ -0.57
SMARCD1-206ENST00000549274 C19orf81C9J6K1 198 aa11.46□□□□□ -0.57
SMARCD1-206ENST00000549274 TRAF5O00463 557 aa11.46□□□□□ -0.57
SMARCD1-206ENST00000549274 PRDM1O75626 825 aa11.46□□□□□ -0.57
SMARCD1-206ENST00000549274 TOP1P11387 765 aaKnown RBP11.46□□□□□ -0.57
SMARCD1-206ENST00000549274 AKR1B1P15121 316 aa11.46□□□□□ -0.57
SMARCD1-206ENST00000549274 PPATQ06203 517 aa11.46□□□□□ -0.57
SMARCD1-206ENST00000549274 RAB3GAP1Q15042 981 aa11.46□□□□□ -0.57
SMARCD1-206ENST00000549274 TMEM67Q5HYA8 995 aa11.46□□□□□ -0.57
SMARCD1-206ENST00000549274 LDLRAD1Q5T700 205 aa11.46□□□□□ -0.57
SMARCD1-206ENST00000549274 STOX1Q6ZVD7 989 aa11.46□□□□□ -0.57
SMARCD1-206ENST00000549274 CDAN1Q8IWY9 1227 aa11.46□□□□□ -0.57
SMARCD1-206ENST00000549274 ANKS1AQ92625 1134 aa11.46□□□□□ -0.57
SMARCD1-206ENST00000549274 SLC10A4Q96EP9 437 aa11.46□□□□□ -0.57
SMARCD1-206ENST00000549274 WDR18Q9BV38 432 aa11.46□□□□□ -0.57
SMARCD1-206ENST00000549274 GOPCQ9HD26 462 aa11.46□□□□□ -0.57
SMARCD1-206ENST00000549274 PDRG1Q9NUG6 133 aa11.46□□□□□ -0.57
SMARCD1-206ENST00000549274 MTMR4Q9NYA4 1195 aa11.46□□□□□ -0.57
SMARCD1-206ENST00000549274 SCAF8Q9UPN6 1271 aaKnown RBP11.46□□□□□ -0.57
SMARCD1-206ENST00000549274 TNKSO95271 1327 aa11.45□□□□□ -0.58
SMARCD1-206ENST00000549274 IGKV6D-41A0A0C4DH26 115 aa11.45□□□□□ -0.58
SMARCD1-206ENST00000549274 CCDC69A6NI79 296 aa11.45□□□□□ -0.58
SMARCD1-206ENST00000549274 SPDYE5A6NIY4 337 aa11.45□□□□□ -0.58
SMARCD1-206ENST00000549274 FAM196BA6NMK8 535 aa11.45□□□□□ -0.58
SMARCD1-206ENST00000549274 GDF11O95390 407 aa11.45□□□□□ -0.58
SMARCD1-206ENST00000549274 ZBTB48P10074 688 aaPredicted RBP11.45□□□□□ -0.58
SMARCD1-206ENST00000549274 INPP5BP32019 993 aa11.45□□□□□ -0.58
SMARCD1-206ENST00000549274 NOVP48745 357 aa11.45□□□□□ -0.58
SMARCD1-206ENST00000549274 HUNKP57058 714 aa11.45□□□□□ -0.58
SMARCD1-206ENST00000549274 PPIL2Q13356 520 aa11.45□□□□□ -0.58
SMARCD1-206ENST00000549274 VGLL4Q14135 290 aa11.45□□□□□ -0.58
SMARCD1-206ENST00000549274 FAM47AQ5JRC9 791 aa11.45□□□□□ -0.58
SMARCD1-206ENST00000549274 RCSD1Q6JBY9 416 aa11.45□□□□□ -0.58
SMARCD1-206ENST00000549274 CHRDL2Q6WN34 429 aa11.45□□□□□ -0.58
SMARCD1-206ENST00000549274 NFXL1Q6ZNB6 911 aa11.45□□□□□ -0.58
SMARCD1-206ENST00000549274 CATIPQ7Z7H3 387 aa11.45□□□□□ -0.58
SMARCD1-206ENST00000549274 ZNF280CQ8ND82 737 aa11.45□□□□□ -0.58
SMARCD1-206ENST00000549274 LPAR1Q92633 364 aa11.45□□□□□ -0.58
SMARCD1-206ENST00000549274 MKL1Q969V6 931 aa11.45□□□□□ -0.58
SMARCD1-206ENST00000549274 CCDC102AQ96A19 550 aa11.45□□□□□ -0.58
SMARCD1-206ENST00000549274 MAP3K14Q99558 947 aa11.45□□□□□ -0.58
SMARCD1-206ENST00000549274 FEZ1Q99689 392 aa11.45□□□□□ -0.58
SMARCD1-206ENST00000549274 KAT14Q9H8E8 782 aa11.45□□□□□ -0.58
SMARCD1-206ENST00000549274 CREBZFQ9NS37 354 aa11.45□□□□□ -0.58
SMARCD1-206ENST00000549274 STX8Q9UNK0 236 aa11.45□□□□□ -0.58
SMARCD1-206ENST00000549274 CCDC196A0A1B0GTZ2 297 aa11.44□□□□□ -0.58
SMARCD1-206ENST00000549274 USP17L10C9JJH3 530 aa11.44□□□□□ -0.58
SMARCD1-206ENST00000549274 CXCL11O14625 94 aa11.44□□□□□ -0.58
SMARCD1-206ENST00000549274 DDAH1O94760 285 aa11.44□□□□□ -0.58
SMARCD1-206ENST00000549274 PTPRAP18433 802 aa11.44□□□□□ -0.58
SMARCD1-206ENST00000549274 APLP1P51693 650 aa11.44□□□□□ -0.58
SMARCD1-206ENST00000549274 NEK4P51957 841 aa11.44□□□□□ -0.58
SMARCD1-206ENST00000549274 EXOSC10Q01780 885 aaKnown RBP11.44□□□□□ -0.58
SMARCD1-206ENST00000549274 PRKG1Q13976 671 aa11.44□□□□□ -0.58
SMARCD1-206ENST00000549274 SEPT2Q15019 361 aa11.44□□□□□ -0.58
SMARCD1-206ENST00000549274 ADCK5Q3MIX3 580 aa11.44□□□□□ -0.58
SMARCD1-206ENST00000549274 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.44□□□□□ -0.58
SMARCD1-206ENST00000549274 SGMS1Q86VZ5 419 aa11.44□□□□□ -0.58
SMARCD1-206ENST00000549274 REM2Q8IYK8 340 aaPredicted RBP11.44□□□□□ -0.58
SMARCD1-206ENST00000549274 ENAHQ8N8S7 591 aaPredicted RBP11.44□□□□□ -0.58
SMARCD1-206ENST00000549274 CEP95Q96GE4 821 aa11.44□□□□□ -0.58
SMARCD1-206ENST00000549274 AGXT2Q9BYV1 514 aa11.44□□□□□ -0.58
SMARCD1-206ENST00000549274 KIAA1683Q9H0B3 1180 aa11.44□□□□□ -0.58
SMARCD1-206ENST00000549274 TLL2Q9Y6L7 1015 aa11.44□□□□□ -0.58
SMARCD1-206ENST00000549274 UBE2Q2LH0YL09 131 aa11.43□□□□□ -0.58
SMARCD1-206ENST00000549274 SH2B2O14492 632 aaPredicted RBP11.43□□□□□ -0.58
SMARCD1-206ENST00000549274 DHX16O60231 1041 aaKnown RBP11.43□□□□□ -0.58
SMARCD1-206ENST00000549274 KIF5BP33176 963 aa11.43□□□□□ -0.58
SMARCD1-206ENST00000549274 ECE1P42892 770 aa11.43□□□□□ -0.58
SMARCD1-206ENST00000549274 GNAQP50148 359 aa11.43□□□□□ -0.58
SMARCD1-206ENST00000549274 PABPC4Q13310 644 aaKnown RBP eCLIP11.43□□□□□ -0.58
SMARCD1-206ENST00000549274 CST9Q5W186 159 aa11.43□□□□□ -0.58
SMARCD1-206ENST00000549274 CPLX2Q6PUV4 134 aaKnown RBP11.43□□□□□ -0.58
SMARCD1-206ENST00000549274 CYB5R4Q7L1T6 521 aa11.43□□□□□ -0.58
SMARCD1-206ENST00000549274 FASTKD5Q7L8L6 764 aaKnown RBP11.43□□□□□ -0.58
SMARCD1-206ENST00000549274 SAPCD2Q86UD0 394 aa11.43□□□□□ -0.58
SMARCD1-206ENST00000549274 GMCL1P1Q8NEA9 526 aa11.43□□□□□ -0.58
SMARCD1-206ENST00000549274 ZKSCAN4Q969J2 545 aaPredicted RBP11.43□□□□□ -0.58
SMARCD1-206ENST00000549274 ZSCAN31Q96LW9 406 aaPredicted RBP11.43□□□□□ -0.58
SMARCD1-206ENST00000549274 SH2B1Q9NRF2 756 aaPredicted RBP11.43□□□□□ -0.58
SMARCD1-206ENST00000549274 TMOD4Q9NZQ9 345 aa11.43□□□□□ -0.58
SMARCD1-206ENST00000549274 ABT1Q9ULW3 272 aaKnown RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms