RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 PRKAR2AP13861 404 aaKnown RBP19.01■□□□□ 0.63
CHMP1A-206ENST00000549139 ADGRA1Q86SQ6 560 aa19.01■□□□□ 0.63
CHMP1A-206ENST00000549139 MAGEB6Q8N7X4 407 aa19.01■□□□□ 0.63
CHMP1A-206ENST00000549139 XRCC5P13010 732 aaKnown RBP19■□□□□ 0.63
CHMP1A-206ENST00000549139 CYP2B6P20813 491 aa19■□□□□ 0.63
CHMP1A-206ENST00000549139 CERS3Q8IU89 383 aa19■□□□□ 0.63
CHMP1A-206ENST00000549139 EDC3Q96F86 508 aaKnown RBP19■□□□□ 0.63
CHMP1A-206ENST00000549139 AATFQ9NY61 560 aaKnown RBP eCLIP19■□□□□ 0.63
CHMP1A-206ENST00000549139 USP17L5A8MUK1 530 aa18.99■□□□□ 0.63
CHMP1A-206ENST00000549139 ERC2O15083 957 aa18.99■□□□□ 0.63
CHMP1A-206ENST00000549139 PEX10O60683 326 aa18.99■□□□□ 0.63
CHMP1A-206ENST00000549139 SLC9C2Q5TAH2 1124 aa18.99■□□□□ 0.63
CHMP1A-206ENST00000549139 LHX8Q68G74 356 aa18.99■□□□□ 0.63
CHMP1A-206ENST00000549139 USP6NLQ92738 828 aa18.99■□□□□ 0.63
CHMP1A-206ENST00000549139 TXNRD2Q9NNW7 524 aa18.99■□□□□ 0.63
CHMP1A-206ENST00000549139 MYH1P12882 1939 aa18.99■□□□□ 0.63
CHMP1A-206ENST00000549139 EYSQ5T1H1 3165 aa18.99■□□□□ 0.63
CHMP1A-206ENST00000549139 SALL3Q9BXA9 1300 aa18.99■□□□□ 0.63
CHMP1A-206ENST00000549139 POTEB2H3BUK9 544 aa18.98■□□□□ 0.63
CHMP1A-206ENST00000549139 HOXA7P31268 230 aaPredicted RBP18.98■□□□□ 0.63
CHMP1A-206ENST00000549139 TEX11Q8IYF3 940 aa18.98■□□□□ 0.63
CHMP1A-206ENST00000549139 SH3RF3Q8TEJ3 882 aaPredicted RBP18.98■□□□□ 0.63
CHMP1A-206ENST00000549139 P2RX7Q99572 595 aaKnown RBP18.98■□□□□ 0.63
CHMP1A-206ENST00000549139 WDR18Q9BV38 432 aa18.98■□□□□ 0.63
CHMP1A-206ENST00000549139 CDH23Q9H251 3354 aa18.98■□□□□ 0.63
CHMP1A-206ENST00000549139 SIPA1L1O43166 1804 aa18.97■□□□□ 0.63
CHMP1A-206ENST00000549139 GLRX3O76003 335 aaKnown RBP18.97■□□□□ 0.63
CHMP1A-206ENST00000549139 PDE6AP16499 860 aa18.97■□□□□ 0.63
CHMP1A-206ENST00000549139 MX1P20591 662 aa18.97■□□□□ 0.63
CHMP1A-206ENST00000549139 CACNB2Q08289 660 aaPredicted RBP18.97■□□□□ 0.63
CHMP1A-206ENST00000549139 LRRC26Q2I0M4 334 aa18.97■□□□□ 0.63
CHMP1A-206ENST00000549139 FAM109BQ6ICB4 259 aaPredicted RBP18.97■□□□□ 0.63
CHMP1A-206ENST00000549139 OTUD7AQ8TE49 926 aaPredicted RBP18.97■□□□□ 0.63
CHMP1A-206ENST00000549139 SOCS4Q8WXH5 440 aa18.97■□□□□ 0.63
CHMP1A-206ENST00000549139 GUCD1Q96NT3 240 aa18.97■□□□□ 0.63
CHMP1A-206ENST00000549139 NUDT12Q9BQG2 462 aa18.97■□□□□ 0.63
CHMP1A-206ENST00000549139 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.97■□□□□ 0.63
CHMP1A-206ENST00000549139 PRUNE2Q8WUY3 3088 aa18.97■□□□□ 0.63
CHMP1A-206ENST00000549139 TCRBV5S4A2TA0A5A2 114 aa18.96■□□□□ 0.63
CHMP1A-206ENST00000549139 ADD2P35612 726 aa18.96■□□□□ 0.63
CHMP1A-206ENST00000549139 BACE1P56817 501 aa18.96■□□□□ 0.63
CHMP1A-206ENST00000549139 DYNLL1P63167 89 aaKnown RBP18.96■□□□□ 0.63
CHMP1A-206ENST00000549139 JAG1P78504 1218 aa18.96■□□□□ 0.63
CHMP1A-206ENST00000549139 NUCB1Q02818 461 aa18.96■□□□□ 0.63
CHMP1A-206ENST00000549139 TSHZ3Q63HK5 1081 aa18.96■□□□□ 0.63
CHMP1A-206ENST00000549139 B4GALNT3Q6L9W6 998 aa18.96■□□□□ 0.63
CHMP1A-206ENST00000549139 POTEEQ6S8J3 1075 aa18.96■□□□□ 0.63
CHMP1A-206ENST00000549139 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.96■□□□□ 0.63
CHMP1A-206ENST00000549139 GPRC5AQ8NFJ5 357 aa18.96■□□□□ 0.63
CHMP1A-206ENST00000549139 PI4K2BQ8TCG2 481 aa18.96■□□□□ 0.63
CHMP1A-206ENST00000549139 AS3MTQ9HBK9 375 aa18.96■□□□□ 0.63
CHMP1A-206ENST00000549139 RBPJLQ9UBG7 517 aa18.96■□□□□ 0.63
CHMP1A-206ENST00000549139 HERC5Q9UII4 1024 aaKnown RBP18.96■□□□□ 0.63
CHMP1A-206ENST00000549139 ZNF532Q9HCE3 1301 aa18.96■□□□□ 0.63
CHMP1A-206ENST00000549139 CCND3P30281 292 aaPredicted RBP18.95■□□□□ 0.62
CHMP1A-206ENST00000549139 HERVK_113P62684 666 aa18.95■□□□□ 0.62
CHMP1A-206ENST00000549139 IRX3P78415 501 aaPredicted RBP18.95■□□□□ 0.62
CHMP1A-206ENST00000549139 MDM2Q00987 491 aaPredicted RBP18.95■□□□□ 0.62
CHMP1A-206ENST00000549139 MTMR2Q13614 643 aa18.95■□□□□ 0.62
CHMP1A-206ENST00000549139 Q3C1V9 767 aa18.95■□□□□ 0.62
CHMP1A-206ENST00000549139 ZSCAN25Q6NSZ9 544 aa18.95■□□□□ 0.62
CHMP1A-206ENST00000549139 CHD1LQ86WJ1 897 aa18.95■□□□□ 0.62
CHMP1A-206ENST00000549139 TRMT44Q8IYL2 757 aaKnown RBP18.95■□□□□ 0.62
CHMP1A-206ENST00000549139 MIGA1Q8NAN2 632 aa18.95■□□□□ 0.62
CHMP1A-206ENST00000549139 TGFBRAP1Q8WUH2 860 aa18.95■□□□□ 0.62
CHMP1A-206ENST00000549139 LNPKQ9C0E8 428 aa18.95■□□□□ 0.62
CHMP1A-206ENST00000549139 ZKSCAN1P17029 563 aaPredicted RBP18.94■□□□□ 0.62
CHMP1A-206ENST00000549139 UBE3CQ15386 1083 aa18.94■□□□□ 0.62
CHMP1A-206ENST00000549139 CCL14Q16627 93 aa18.94■□□□□ 0.62
CHMP1A-206ENST00000549139 MORN1Q5T089 497 aa18.94■□□□□ 0.62
CHMP1A-206ENST00000549139 KBTBD3Q8NAB2 608 aa18.94■□□□□ 0.62
CHMP1A-206ENST00000549139 RIOK1Q9BRS2 568 aaKnown RBP18.94■□□□□ 0.62
CHMP1A-206ENST00000549139 PORCNQ9H237 461 aa18.94■□□□□ 0.62
CHMP1A-206ENST00000549139 FRMPD3Q5JV73 1810 aa18.93■□□□□ 0.62
CHMP1A-206ENST00000549139 MAGEB6P1A0A0J9YX57 407 aa18.93■□□□□ 0.62
CHMP1A-206ENST00000549139 MAPK4P31152 587 aa18.93■□□□□ 0.62
CHMP1A-206ENST00000549139 PDE1AP54750 535 aa18.93■□□□□ 0.62
CHMP1A-206ENST00000549139 METTL16Q86W50 562 aaKnown RBP18.93■□□□□ 0.62
CHMP1A-206ENST00000549139 DHX36Q9H2U1 1008 aaKnown RBP18.93■□□□□ 0.62
CHMP1A-206ENST00000549139 DNAJC18Q9H819 358 aa18.93■□□□□ 0.62
CHMP1A-206ENST00000549139 PI4KBQ9UBF8 816 aa18.93■□□□□ 0.62
CHMP1A-206ENST00000549139 ASNSP08243 561 aa18.92■□□□□ 0.62
CHMP1A-206ENST00000549139 ERVK-9P63128 1117 aa18.92■□□□□ 0.62
CHMP1A-206ENST00000549139 ERVK-24P63145 666 aa18.92■□□□□ 0.62
CHMP1A-206ENST00000549139 SHROOM1Q2M3G4 852 aaPredicted RBP18.92■□□□□ 0.62
CHMP1A-206ENST00000549139 GPR142Q7Z601 462 aa18.92■□□□□ 0.62
CHMP1A-206ENST00000549139 TMOD4Q9NZQ9 345 aa18.92■□□□□ 0.62
CHMP1A-206ENST00000549139 C19orf81C9J6K1 198 aa18.91■□□□□ 0.62
CHMP1A-206ENST00000549139 RGS2P41220 211 aa18.91■□□□□ 0.62
CHMP1A-206ENST00000549139 MAPKAPK5Q8IW41 473 aa18.91■□□□□ 0.62
CHMP1A-206ENST00000549139 FLT1P17948 1338 aa18.91■□□□□ 0.62
CHMP1A-206ENST00000549139 ZFYP08048 801 aaPredicted RBP18.9■□□□□ 0.62
CHMP1A-206ENST00000549139 USP5P45974 858 aa18.9■□□□□ 0.62
CHMP1A-206ENST00000549139 LRRFIP1Q32MZ4 808 aaKnown RBP18.9■□□□□ 0.62
CHMP1A-206ENST00000549139 SLFNL1Q499Z3 407 aa18.9■□□□□ 0.62
CHMP1A-206ENST00000549139 PLEKHH3Q7Z736 793 aa18.9■□□□□ 0.62
CHMP1A-206ENST00000549139 APBA2Q99767 749 aa18.9■□□□□ 0.62
CHMP1A-206ENST00000549139 OSBPL3Q9H4L5 887 aa18.9■□□□□ 0.62
CHMP1A-206ENST00000549139 NAV1Q8NEY1 1877 aa18.89■□□□□ 0.61
CHMP1A-206ENST00000549139 USP17L10C9JJH3 530 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms