RNA–Protein interactions for RNA: ENST00000549100.5

DEPDC4-206, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 501 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-206ENST00000549100 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.36□□□□□ -1.87
DEPDC4-206ENST00000549100 SV2BQ7L1I2 683 aa3.36□□□□□ -1.87
DEPDC4-206ENST00000549100 LSRQ86X29 649 aaPredicted RBP3.36□□□□□ -1.87
DEPDC4-206ENST00000549100 ZNF654Q8IZM8 581 aa3.36□□□□□ -1.87
DEPDC4-206ENST00000549100 SREK1Q8WXA9 508 aaKnown RBP3.36□□□□□ -1.87
DEPDC4-206ENST00000549100 RHOVQ96L33 236 aa3.36□□□□□ -1.87
DEPDC4-206ENST00000549100 KCNC2Q96PR1 638 aa3.36□□□□□ -1.87
DEPDC4-206ENST00000549100 RSRP1Q9BUV0 290 aa3.36□□□□□ -1.87
DEPDC4-206ENST00000549100 CLEC4MQ9H2X3 399 aaPredicted RBP3.36□□□□□ -1.87
DEPDC4-206ENST00000549100 ADAMTS1Q9UHI8 967 aa3.36□□□□□ -1.87
DEPDC4-206ENST00000549100 GPN3Q9UHW5 284 aaPredicted RBP3.36□□□□□ -1.87
DEPDC4-206ENST00000549100 SMG5Q9UPR3 1016 aaKnown RBP3.36□□□□□ -1.87
DEPDC4-206ENST00000549100 SUPT16HQ9Y5B9 1047 aaKnown RBP3.36□□□□□ -1.87
DEPDC4-206ENST00000549100 ADAMTS12P58397 1594 aa3.36□□□□□ -1.87
DEPDC4-206ENST00000549100 MINDY4BA8MYZ0 360 aa3.35□□□□□ -1.87
DEPDC4-206ENST00000549100 NUAK1O60285 661 aa3.35□□□□□ -1.87
DEPDC4-206ENST00000549100 B3GALT4O96024 378 aa3.35□□□□□ -1.87
DEPDC4-206ENST00000549100 ESRRAP11474 423 aaPredicted RBP3.35□□□□□ -1.87
DEPDC4-206ENST00000549100 TFE3P19532 575 aaPredicted RBP3.35□□□□□ -1.87
DEPDC4-206ENST00000549100 GARTP22102 1010 aa3.35□□□□□ -1.87
DEPDC4-206ENST00000549100 GBP2P32456 591 aaPredicted RBP3.35□□□□□ -1.87
DEPDC4-206ENST00000549100 LIG3P49916 1009 aa3.35□□□□□ -1.87
DEPDC4-206ENST00000549100 USP11P51784 963 aa3.35□□□□□ -1.87
DEPDC4-206ENST00000549100 FAM160A1Q05DH4 1040 aa3.35□□□□□ -1.87
DEPDC4-206ENST00000549100 PCDH1Q08174 1060 aa3.35□□□□□ -1.87
DEPDC4-206ENST00000549100 PAK2Q13177 524 aa3.35□□□□□ -1.87
DEPDC4-206ENST00000549100 RPS26P11Q5JNZ5 115 aaPredicted RBP3.35□□□□□ -1.87
DEPDC4-206ENST00000549100 TTBK2Q6IQ55 1244 aa3.35□□□□□ -1.87
DEPDC4-206ENST00000549100 PHC3Q8NDX5 983 aa3.35□□□□□ -1.87
DEPDC4-206ENST00000549100 CXorf38Q8TB03 319 aa3.35□□□□□ -1.87
DEPDC4-206ENST00000549100 STK35Q8TDR2 534 aa3.35□□□□□ -1.87
DEPDC4-206ENST00000549100 EZH1Q92800 747 aaPredicted RBP3.35□□□□□ -1.87
DEPDC4-206ENST00000549100 TMEM74Q96NL1 305 aa3.35□□□□□ -1.87
DEPDC4-206ENST00000549100 TMPRSS13Q9BYE2 586 aa3.35□□□□□ -1.87
DEPDC4-206ENST00000549100 CEP44Q9C0F1 390 aa3.35□□□□□ -1.87
DEPDC4-206ENST00000549100 ZFYVE1Q9HBF4 777 aa3.35□□□□□ -1.87
DEPDC4-206ENST00000549100 INPP5FQ9Y2H2 1132 aa3.35□□□□□ -1.87
DEPDC4-206ENST00000549100 CNTNAP4Q9C0A0 1308 aa3.35□□□□□ -1.87
DEPDC4-206ENST00000549100 CLSPNQ9HAW4 1339 aa3.35□□□□□ -1.87
DEPDC4-206ENST00000549100 SUPT6HQ7KZ85 1726 aaKnown RBP3.35□□□□□ -1.87
DEPDC4-206ENST00000549100 TCOF1Q13428 1488 aaKnown RBP3.35□□□□□ -1.87
DEPDC4-206ENST00000549100 CCDC18Q5T9S5 1454 aa3.35□□□□□ -1.87
DEPDC4-206ENST00000549100 EFCAB5A4FU69 1503 aa3.34□□□□□ -1.87
DEPDC4-206ENST00000549100 WDR62O43379 1518 aa3.34□□□□□ -1.87
DEPDC4-206ENST00000549100 ETV2O00321 342 aaPredicted RBP3.34□□□□□ -1.87
DEPDC4-206ENST00000549100 SOX1O00570 391 aaPredicted RBP3.34□□□□□ -1.87
DEPDC4-206ENST00000549100 PF4P02776 101 aa3.34□□□□□ -1.87
DEPDC4-206ENST00000549100 CENPBP07199 599 aaPredicted RBP3.34□□□□□ -1.87
DEPDC4-206ENST00000549100 TMEM253P0C7T8 217 aa3.34□□□□□ -1.87
DEPDC4-206ENST00000549100 BMP6P22004 513 aa3.34□□□□□ -1.87
DEPDC4-206ENST00000549100 DNAJA1P31689 397 aaKnown RBP3.34□□□□□ -1.87
DEPDC4-206ENST00000549100 EIF4A3P38919 411 aaKnown RBP3.34□□□□□ -1.87
DEPDC4-206ENST00000549100 GJA8P48165 433 aa3.34□□□□□ -1.87
DEPDC4-206ENST00000549100 PCNX4Q63HM2 1172 aa3.34□□□□□ -1.87
DEPDC4-206ENST00000549100 FBXL19Q6PCT2 694 aa3.34□□□□□ -1.87
DEPDC4-206ENST00000549100 AGMOQ6ZNB7 445 aa3.34□□□□□ -1.87
DEPDC4-206ENST00000549100 RELL1Q8IUW5 271 aa3.34□□□□□ -1.87
DEPDC4-206ENST00000549100 FAM181AQ8N9Y4 354 aa3.34□□□□□ -1.87
DEPDC4-206ENST00000549100 SLC43A3Q8NBI5 491 aa3.34□□□□□ -1.87
DEPDC4-206ENST00000549100 FBXO15Q8NCQ5 510 aaPredicted RBP3.34□□□□□ -1.87
DEPDC4-206ENST00000549100 C2CD4AQ8NCU7 369 aaPredicted RBP3.34□□□□□ -1.87
DEPDC4-206ENST00000549100 SMG8Q8ND04 991 aaKnown RBP3.34□□□□□ -1.87
DEPDC4-206ENST00000549100 EAF1Q96JC9 268 aaPredicted RBP3.34□□□□□ -1.87
DEPDC4-206ENST00000549100 DRC1Q96MC2 740 aa3.34□□□□□ -1.87
DEPDC4-206ENST00000549100 DIRC2Q96SL1 478 aa3.34□□□□□ -1.87
DEPDC4-206ENST00000549100 SPON2Q9BUD6 331 aa3.34□□□□□ -1.87
DEPDC4-206ENST00000549100 TMEM39AQ9NV64 488 aa3.34□□□□□ -1.87
DEPDC4-206ENST00000549100 PCDHB5Q9Y5E4 795 aa3.34□□□□□ -1.87
DEPDC4-206ENST00000549100 FHAD1B1AJZ9 1412 aa3.34□□□□□ -1.88
DEPDC4-206ENST00000549100 ABCC5O15440 1437 aa3.34□□□□□ -1.88
DEPDC4-206ENST00000549100 MYOM3Q5VTT5 1437 aa3.34□□□□□ -1.88
DEPDC4-206ENST00000549100 PRG4Q92954 1404 aaPredicted RBP3.34□□□□□ -1.88
DEPDC4-206ENST00000549100 EPRSP07814 1512 aaKnown RBP3.34□□□□□ -1.88
DEPDC4-206ENST00000549100 CEP170Q5SW79 1584 aa3.34□□□□□ -1.88
DEPDC4-206ENST00000549100 H3BRJ5 948 aa3.33□□□□□ -1.88
DEPDC4-206ENST00000549100 NFICP08651 508 aa3.33□□□□□ -1.88
DEPDC4-206ENST00000549100 MED14OSP0DP75 135 aa3.33□□□□□ -1.88
DEPDC4-206ENST00000549100 HSPA5P11021 654 aaKnown RBP3.33□□□□□ -1.88
DEPDC4-206ENST00000549100 CRKP46108 304 aa3.33□□□□□ -1.88
DEPDC4-206ENST00000549100 LINC00310P59036 64 aa3.33□□□□□ -1.88
DEPDC4-206ENST00000549100 CAMK2GQ13555 558 aaPredicted RBP3.33□□□□□ -1.88
DEPDC4-206ENST00000549100 PWP1Q13610 501 aa3.33□□□□□ -1.88
DEPDC4-206ENST00000549100 IKBKEQ14164 716 aa3.33□□□□□ -1.88
DEPDC4-206ENST00000549100 SF3A1Q15459 793 aaKnown RBP3.33□□□□□ -1.88
DEPDC4-206ENST00000549100 NUTM2GQ5VZR2 741 aa3.33□□□□□ -1.88
DEPDC4-206ENST00000549100 MPRIPQ6WCQ1 1025 aa3.33□□□□□ -1.88
DEPDC4-206ENST00000549100 BNC2Q6ZN30 1099 aaPredicted RBP3.33□□□□□ -1.88
DEPDC4-206ENST00000549100 KIAA0825Q8IV33 1275 aa3.33□□□□□ -1.88
DEPDC4-206ENST00000549100 SULF2Q8IWU5 870 aa3.33□□□□□ -1.88
DEPDC4-206ENST00000549100 GRIN3AQ8TCU5 1115 aa3.33□□□□□ -1.88
DEPDC4-206ENST00000549100 ZNF296Q8WUU4 475 aaPredicted RBP3.33□□□□□ -1.88
DEPDC4-206ENST00000549100 GPRASP2Q96D09 838 aa3.33□□□□□ -1.88
DEPDC4-206ENST00000549100 MISP3Q96FF7 219 aa3.33□□□□□ -1.88
DEPDC4-206ENST00000549100 GMLQ99445 158 aa3.33□□□□□ -1.88
DEPDC4-206ENST00000549100 TANGO6Q9C0B7 1094 aa3.33□□□□□ -1.88
DEPDC4-206ENST00000549100 KCNQ5Q9NR82 932 aa3.33□□□□□ -1.88
DEPDC4-206ENST00000549100 RTEL1Q9NZ71 1219 aa3.33□□□□□ -1.88
DEPDC4-206ENST00000549100 UBP1Q9NZI7 540 aa3.33□□□□□ -1.88
DEPDC4-206ENST00000549100 PPP1R1BQ9UD71 204 aaPredicted RBP3.33□□□□□ -1.88
DEPDC4-206ENST00000549100 CTNND2Q9UQB3 1225 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms