RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 CLEC10AQ8IUN9 316 aa24.89■■□□□ 1.58
CACNB3-210ENST00000548874 SIAH1Q8IUQ4 282 aa24.89■■□□□ 1.58
CACNB3-210ENST00000548874 OTUD5Q96G74 571 aa24.89■■□□□ 1.58
CACNB3-210ENST00000548874 IL17RBQ9NRM6 502 aa24.89■■□□□ 1.58
CACNB3-210ENST00000548874 ZBTB48P10074 688 aaPredicted RBP24.88■■□□□ 1.57
CACNB3-210ENST00000548874 NOVP48745 357 aa24.88■■□□□ 1.57
CACNB3-210ENST00000548874 HTRA3P83110 453 aa24.88■■□□□ 1.57
CACNB3-210ENST00000548874 ICA1Q05084 483 aa24.88■■□□□ 1.57
CACNB3-210ENST00000548874 COL9A3Q14050 684 aaPredicted RBP24.88■■□□□ 1.57
CACNB3-210ENST00000548874 CCDC102AQ96A19 550 aa24.88■■□□□ 1.57
CACNB3-210ENST00000548874 CEP95Q96GE4 821 aa24.88■■□□□ 1.57
CACNB3-210ENST00000548874 NEK1Q96PY6 1258 aa24.88■■□□□ 1.57
CACNB3-210ENST00000548874 AS3MTQ9HBK9 375 aa24.88■■□□□ 1.57
CACNB3-210ENST00000548874 MTMR4Q9NYA4 1195 aa24.88■■□□□ 1.57
CACNB3-210ENST00000548874 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.88■■□□□ 1.57
CACNB3-210ENST00000548874 AFG3L2Q9Y4W6 797 aa24.88■■□□□ 1.57
CACNB3-210ENST00000548874 NMT2O60551 498 aa24.87■■□□□ 1.57
CACNB3-210ENST00000548874 ANTXR2P58335 489 aa24.87■■□□□ 1.57
CACNB3-210ENST00000548874 ZNF280CQ8ND82 737 aa24.87■■□□□ 1.57
CACNB3-210ENST00000548874 NYAP2Q9P242 653 aa24.87■■□□□ 1.57
CACNB3-210ENST00000548874 KCNH4Q9UQ05 1017 aa24.87■■□□□ 1.57
CACNB3-210ENST00000548874 IRF6O14896 467 aa24.86■■□□□ 1.57
CACNB3-210ENST00000548874 C22orf23Q9BZE7 217 aa24.86■■□□□ 1.57
CACNB3-210ENST00000548874 EEF2P13639 858 aaKnown RBP24.85■■□□□ 1.57
CACNB3-210ENST00000548874 RBM25P49756 843 aaKnown RBP24.85■■□□□ 1.57
CACNB3-210ENST00000548874 SPP2Q13103 211 aa24.85■■□□□ 1.57
CACNB3-210ENST00000548874 PPP4R3BQ5MIZ7 849 aa24.85■■□□□ 1.57
CACNB3-210ENST00000548874 CYP4F22Q6NT55 531 aa24.85■■□□□ 1.57
CACNB3-210ENST00000548874 IQCA1Q86XH1 822 aa24.85■■□□□ 1.57
CACNB3-210ENST00000548874 ACER1Q8TDN7 264 aa24.85■■□□□ 1.57
CACNB3-210ENST00000548874 JAKMIP1Q96N16 626 aaKnown RBP24.85■■□□□ 1.57
CACNB3-210ENST00000548874 TM6SF1Q9BZW5 370 aa24.85■■□□□ 1.57
CACNB3-210ENST00000548874 UPF2Q9HAU5 1272 aaKnown RBP24.85■■□□□ 1.57
CACNB3-210ENST00000548874 A0A1W2PRG0 241 aa24.84■■□□□ 1.57
CACNB3-210ENST00000548874 CXCL11O14625 94 aa24.84■■□□□ 1.57
CACNB3-210ENST00000548874 TTLL1O95922 423 aa24.84■■□□□ 1.57
CACNB3-210ENST00000548874 HMGB1P09429 215 aaKnown RBP24.84■■□□□ 1.57
CACNB3-210ENST00000548874 MCM5P33992 734 aa24.84■■□□□ 1.57
CACNB3-210ENST00000548874 CCDC178Q5BJE1 867 aa24.84■■□□□ 1.57
CACNB3-210ENST00000548874 RCSD1Q6JBY9 416 aa24.84■■□□□ 1.57
CACNB3-210ENST00000548874 CAPNS2Q96L46 248 aa24.84■■□□□ 1.57
CACNB3-210ENST00000548874 ZSCAN10Q96SZ4 725 aaPredicted RBP24.84■■□□□ 1.57
CACNB3-210ENST00000548874 ZKSCAN3Q9BRR0 538 aa24.84■■□□□ 1.57
CACNB3-210ENST00000548874 MTA3Q9BTC8 594 aa24.84■■□□□ 1.57
CACNB3-210ENST00000548874 WDR19Q8NEZ3 1342 aa24.84■■□□□ 1.57
CACNB3-210ENST00000548874 PSMA5P28066 241 aa24.83■■□□□ 1.57
CACNB3-210ENST00000548874 ECE1P42892 770 aa24.83■■□□□ 1.57
CACNB3-210ENST00000548874 EXOSC10Q01780 885 aaKnown RBP24.83■■□□□ 1.57
CACNB3-210ENST00000548874 DGKHQ86XP1 1220 aa24.83■■□□□ 1.57
CACNB3-210ENST00000548874 ANKS1AQ92625 1134 aa24.83■■□□□ 1.57
CACNB3-210ENST00000548874 MKL1Q969V6 931 aa24.83■■□□□ 1.57
CACNB3-210ENST00000548874 TTC14Q96N46 770 aa24.83■■□□□ 1.57
CACNB3-210ENST00000548874 KIAA1683Q9H0B3 1180 aa24.83■■□□□ 1.57
CACNB3-210ENST00000548874 ARHGEF10LQ9HCE6 1279 aa24.83■■□□□ 1.57
CACNB3-210ENST00000548874 TMX2Q9Y320 296 aa24.83■■□□□ 1.57
CACNB3-210ENST00000548874 TNKSO95271 1327 aa24.83■■□□□ 1.56
CACNB3-210ENST00000548874 TRIM75PA6NK02 468 aa24.82■■□□□ 1.56
CACNB3-210ENST00000548874 USP17L10C9JJH3 530 aa24.82■■□□□ 1.56
CACNB3-210ENST00000548874 PRC1O43663 620 aa24.82■■□□□ 1.56
CACNB3-210ENST00000548874 BACE1P56817 501 aa24.82■■□□□ 1.56
CACNB3-210ENST00000548874 SEC23AQ15436 765 aa24.82■■□□□ 1.56
CACNB3-210ENST00000548874 SH3D19Q5HYK7 790 aa24.82■■□□□ 1.56
CACNB3-210ENST00000548874 PAXIP1Q6ZW49 1069 aaPredicted RBP24.82■■□□□ 1.56
CACNB3-210ENST00000548874 DHX32Q7L7V1 743 aaKnown RBP24.82■■□□□ 1.56
CACNB3-210ENST00000548874 CHST3Q7LGC8 479 aa24.82■■□□□ 1.56
CACNB3-210ENST00000548874 ENAHQ8N8S7 591 aaPredicted RBP24.82■■□□□ 1.56
CACNB3-210ENST00000548874 MS4A4AQ96JQ5 239 aa24.82■■□□□ 1.56
CACNB3-210ENST00000548874 UBAC1Q9BSL1 405 aa24.82■■□□□ 1.56
CACNB3-210ENST00000548874 ZSWIM6Q9HCJ5 1215 aa24.82■■□□□ 1.56
CACNB3-210ENST00000548874 CLIP2Q9UDT6 1046 aa24.82■■□□□ 1.56
CACNB3-210ENST00000548874 SYNPO2Q9UMS6 1093 aa24.82■■□□□ 1.56
CACNB3-210ENST00000548874 PTPRFP10586 1907 aa24.82■■□□□ 1.56
CACNB3-210ENST00000548874 A0A0G2JLL6 359 aaPredicted RBP24.81■■□□□ 1.56
CACNB3-210ENST00000548874 MKRN3Q13064 507 aaKnown RBP24.81■■□□□ 1.56
CACNB3-210ENST00000548874 SNAPC2Q13487 334 aa24.81■■□□□ 1.56
CACNB3-210ENST00000548874 MTMR2Q13614 643 aa24.81■■□□□ 1.56
CACNB3-210ENST00000548874 BLOC1S2Q6QNY1 142 aa24.81■■□□□ 1.56
CACNB3-210ENST00000548874 PRRT2Q7Z6L0 340 aaPredicted RBP24.81■■□□□ 1.56
CACNB3-210ENST00000548874 IGDCC4Q8TDY8 1250 aa24.81■■□□□ 1.56
CACNB3-210ENST00000548874 TBC1D32Q96NH3 1257 aa24.81■■□□□ 1.56
CACNB3-210ENST00000548874 SH2D4AQ9H788 454 aa24.81■■□□□ 1.56
CACNB3-210ENST00000548874 STX8Q9UNK0 236 aa24.81■■□□□ 1.56
CACNB3-210ENST00000548874 C19orf81C9J6K1 198 aa24.8■■□□□ 1.56
CACNB3-210ENST00000548874 CASTP20810 708 aaKnown RBP24.8■■□□□ 1.56
CACNB3-210ENST00000548874 GTF2A2P52657 109 aa24.8■■□□□ 1.56
CACNB3-210ENST00000548874 ATP2B2Q01814 1243 aa24.8■■□□□ 1.56
CACNB3-210ENST00000548874 NOGQ13253 232 aa24.8■■□□□ 1.56
CACNB3-210ENST00000548874 TMEM87BQ96K49 555 aa24.8■■□□□ 1.56
CACNB3-210ENST00000548874 KIF2CQ99661 725 aa24.8■■□□□ 1.56
CACNB3-210ENST00000548874 MYH4Q9Y623 1939 aa24.79■■□□□ 1.56
CACNB3-210ENST00000548874 IFIT3O14879 490 aaKnown RBP24.79■■□□□ 1.56
CACNB3-210ENST00000548874 CPA1P15085 419 aa24.79■■□□□ 1.56
CACNB3-210ENST00000548874 RPS6KB1P23443 525 aa24.79■■□□□ 1.56
CACNB3-210ENST00000548874 VEGFBP49765 207 aa24.79■■□□□ 1.56
CACNB3-210ENST00000548874 MOGSQ13724 837 aa24.79■■□□□ 1.56
CACNB3-210ENST00000548874 SART3Q15020 963 aaKnown RBP24.79■■□□□ 1.56
CACNB3-210ENST00000548874 C12orf42Q96LP6 360 aa24.79■■□□□ 1.56
CACNB3-210ENST00000548874 FEZ1Q99689 392 aa24.79■■□□□ 1.56
CACNB3-210ENST00000548874 TMEM47Q9BQJ4 181 aa24.79■■□□□ 1.56
CACNB3-210ENST00000548874 WDR33Q9C0J8 1336 aaKnown RBP24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms