RNA–Protein interactions for RNA: ENST00000548313.5

DEPDC4-205, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-205ENST00000548313 DUSP23Q9BVJ7 150 aa6.76□□□□□ -1.33
DEPDC4-205ENST00000548313 BSDC1Q9NW68 430 aaPredicted RBP6.76□□□□□ -1.33
DEPDC4-205ENST00000548313 FAM87AP0C7U9 286 aa6.75□□□□□ -1.33
DEPDC4-205ENST00000548313 CLCQ05315 142 aa6.75□□□□□ -1.33
DEPDC4-205ENST00000548313 PRAMEF13Q5VWM6 474 aa6.75□□□□□ -1.33
DEPDC4-205ENST00000548313 SLC43A3Q8NBI5 491 aa6.75□□□□□ -1.33
DEPDC4-205ENST00000548313 FAM13CQ8NE31 585 aa6.75□□□□□ -1.33
DEPDC4-205ENST00000548313 CAPN10Q9HC96 672 aa6.75□□□□□ -1.33
DEPDC4-205ENST00000548313 GMIPQ9P107 970 aa6.75□□□□□ -1.33
DEPDC4-205ENST00000548313 SLC22A31A6NKX4 558 aa6.74□□□□□ -1.33
DEPDC4-205ENST00000548313 FAM170BA6NMN3 283 aa6.74□□□□□ -1.33
DEPDC4-205ENST00000548313 CYP26A1O43174 497 aa6.74□□□□□ -1.33
DEPDC4-205ENST00000548313 TNNI2P48788 182 aa6.74□□□□□ -1.33
DEPDC4-205ENST00000548313 ZC3H6P61129 1189 aaKnown RBP6.74□□□□□ -1.33
DEPDC4-205ENST00000548313 ZNF746Q6NUN9 644 aaPredicted RBP6.74□□□□□ -1.33
DEPDC4-205ENST00000548313 TOP6BLQ8N6T0 577 aa6.74□□□□□ -1.33
DEPDC4-205ENST00000548313 GINM1Q9NU53 330 aa6.74□□□□□ -1.33
DEPDC4-205ENST00000548313 ZNRF3Q9ULT6 936 aa6.74□□□□□ -1.33
DEPDC4-205ENST00000548313 EFR3BQ9Y2G0 817 aa6.74□□□□□ -1.33
DEPDC4-205ENST00000548313 ATF4P18848 351 aaPredicted RBP6.73□□□□□ -1.33
DEPDC4-205ENST00000548313 CDCP2Q5VXM1 449 aa6.73□□□□□ -1.33
DEPDC4-205ENST00000548313 LETMD1Q6P1Q0 360 aa6.73□□□□□ -1.33
DEPDC4-205ENST00000548313 ZNF765Q7L2R6 523 aa6.73□□□□□ -1.33
DEPDC4-205ENST00000548313 SHISA5Q8N114 240 aa6.73□□□□□ -1.33
DEPDC4-205ENST00000548313 RBBP8NLQ8NC74 664 aaPredicted RBP6.73□□□□□ -1.33
DEPDC4-205ENST00000548313 COX4I2Q96KJ9 171 aa6.73□□□□□ -1.33
DEPDC4-205ENST00000548313 FERD3LQ96RJ6 166 aa6.73□□□□□ -1.33
DEPDC4-205ENST00000548313 GTF2IRD1Q9UHL9 959 aa6.73□□□□□ -1.33
DEPDC4-205ENST00000548313 STRIP2Q9ULQ0 834 aa6.73□□□□□ -1.33
DEPDC4-205ENST00000548313 MEIS3P2A8K0S8 358 aa6.72□□□□□ -1.33
DEPDC4-205ENST00000548313 UPK3BL1B0FP48 263 aa6.72□□□□□ -1.33
DEPDC4-205ENST00000548313 CHURC1-FNTBB4DL54 471 aa6.72□□□□□ -1.33
DEPDC4-205ENST00000548313 UPK3BL2E5RIL1 263 aa6.72□□□□□ -1.33
DEPDC4-205ENST00000548313 IGF2BP3O00425 579 aaKnown RBP eCLIP6.72□□□□□ -1.33
DEPDC4-205ENST00000548313 LEFTY1O75610 366 aa6.72□□□□□ -1.33
DEPDC4-205ENST00000548313 SLITRK5O94991 958 aa6.72□□□□□ -1.33
DEPDC4-205ENST00000548313 NFXL1Q6ZNB6 911 aa6.72□□□□□ -1.33
DEPDC4-205ENST00000548313 FAM214BQ7L5A3 538 aa6.72□□□□□ -1.33
DEPDC4-205ENST00000548313 CYB5D2Q8WUJ1 264 aa6.72□□□□□ -1.33
DEPDC4-205ENST00000548313 TMEM40Q8WWA1 233 aa6.72□□□□□ -1.33
DEPDC4-205ENST00000548313 CCDC74BQ96LY2 380 aa6.72□□□□□ -1.33
DEPDC4-205ENST00000548313 C8orf37Q96NL8 207 aa6.72□□□□□ -1.33
DEPDC4-205ENST00000548313 MIPEPQ99797 713 aa6.72□□□□□ -1.33
DEPDC4-205ENST00000548313 TINF2Q9BSI4 451 aa6.72□□□□□ -1.33
DEPDC4-205ENST00000548313 MKNK2Q9HBH9 465 aa6.72□□□□□ -1.33
DEPDC4-205ENST00000548313 KLHL3Q9UH77 587 aa6.72□□□□□ -1.33
DEPDC4-205ENST00000548313 CEP131Q9UPN4 1083 aa6.72□□□□□ -1.33
DEPDC4-205ENST00000548313 RGS13O14921 159 aa6.71□□□□□ -1.34
DEPDC4-205ENST00000548313 EOMESO95936 686 aa6.71□□□□□ -1.34
DEPDC4-205ENST00000548313 CYP7A1P22680 504 aa6.71□□□□□ -1.34
DEPDC4-205ENST00000548313 CCNFP41002 786 aa6.71□□□□□ -1.34
DEPDC4-205ENST00000548313 ETV3P41162 512 aa6.71□□□□□ -1.34
DEPDC4-205ENST00000548313 NASPP49321 788 aaPredicted RBP6.71□□□□□ -1.34
DEPDC4-205ENST00000548313 INTS3Q68E01 1043 aaKnown RBP6.71□□□□□ -1.34
DEPDC4-205ENST00000548313 FLCNQ8NFG4 579 aa6.71□□□□□ -1.34
DEPDC4-205ENST00000548313 ATG4CQ96DT6 458 aa6.71□□□□□ -1.34
DEPDC4-205ENST00000548313 CRBNQ96SW2 442 aa6.71□□□□□ -1.34
DEPDC4-205ENST00000548313 GMLQ99445 158 aa6.71□□□□□ -1.34
DEPDC4-205ENST00000548313 DPH2Q9BQC3 489 aaPredicted RBP6.71□□□□□ -1.34
DEPDC4-205ENST00000548313 CNNM2Q9H8M5 875 aa6.71□□□□□ -1.34
DEPDC4-205ENST00000548313 PPT2Q9UMR5 302 aa6.71□□□□□ -1.34
DEPDC4-205ENST00000548313 MAPK8IP1Q9UQF2 711 aa6.71□□□□□ -1.34
DEPDC4-205ENST00000548313 DNAJA2O60884 412 aa6.7□□□□□ -1.34
DEPDC4-205ENST00000548313 RAG1P15918 1043 aa6.7□□□□□ -1.34
DEPDC4-205ENST00000548313 ARID5AQ03989 594 aa6.7□□□□□ -1.34
DEPDC4-205ENST00000548313 ARSHQ5FYA8 562 aa6.7□□□□□ -1.34
DEPDC4-205ENST00000548313 OVOS1Q6IE37 1185 aa6.7□□□□□ -1.34
DEPDC4-205ENST00000548313 NLRC3Q7RTR2 1065 aa6.7□□□□□ -1.34
DEPDC4-205ENST00000548313 OR6P1Q8NGX9 317 aa6.7□□□□□ -1.34
DEPDC4-205ENST00000548313 TM9SF2Q99805 663 aa6.7□□□□□ -1.34
DEPDC4-205ENST00000548313 SRRTQ9BXP5 876 aaKnown RBP6.7□□□□□ -1.34
DEPDC4-205ENST00000548313 PRDM5Q9NQX1 630 aaPredicted RBP6.7□□□□□ -1.34
DEPDC4-205ENST00000548313 NME1P15531 152 aaKnown RBP6.69□□□□□ -1.34
DEPDC4-205ENST00000548313 EIF6P56537 245 aaKnown RBP6.69□□□□□ -1.34
DEPDC4-205ENST00000548313 FBXW10Q5XX13 1052 aa6.69□□□□□ -1.34
DEPDC4-205ENST00000548313 C22orf34Q6ZV56 151 aa6.69□□□□□ -1.34
DEPDC4-205ENST00000548313 PHACTR4Q8IZ21 702 aa6.69□□□□□ -1.34
DEPDC4-205ENST00000548313 TAB3Q8N5C8 712 aaPredicted RBP6.69□□□□□ -1.34
DEPDC4-205ENST00000548313 DNAJB8Q8NHS0 232 aa6.69□□□□□ -1.34
DEPDC4-205ENST00000548313 XAGE3Q8WTP9 111 aa6.69□□□□□ -1.34
DEPDC4-205ENST00000548313 PPP1R13LQ8WUF5 828 aa6.69□□□□□ -1.34
DEPDC4-205ENST00000548313 CPLX3Q8WVH0 158 aa6.69□□□□□ -1.34
DEPDC4-205ENST00000548313 HEXIM2Q96MH2 286 aaKnown RBP6.69□□□□□ -1.34
DEPDC4-205ENST00000548313 TPX2Q9ULW0 747 aaKnown RBP6.69□□□□□ -1.34
DEPDC4-205ENST00000548313 BIN1O00499 593 aa6.68□□□□□ -1.34
DEPDC4-205ENST00000548313 TNFRSF10CO14798 259 aa6.68□□□□□ -1.34
DEPDC4-205ENST00000548313 GBP1P32455 592 aa6.68□□□□□ -1.34
DEPDC4-205ENST00000548313 GIPRP48546 466 aa6.68□□□□□ -1.34
DEPDC4-205ENST00000548313 NAALADL2Q58DX5 795 aa6.68□□□□□ -1.34
DEPDC4-205ENST00000548313 SFRP5Q5T4F7 317 aa6.68□□□□□ -1.34
DEPDC4-205ENST00000548313 CDH24Q86UP0 819 aa6.68□□□□□ -1.34
DEPDC4-205ENST00000548313 RIN3Q8TB24 985 aa6.68□□□□□ -1.34
DEPDC4-205ENST00000548313 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.68□□□□□ -1.34
DEPDC4-205ENST00000548313 PAK6Q9NQU5 681 aaPredicted RBP6.68□□□□□ -1.34
DEPDC4-205ENST00000548313 KIR3DL1P43629 444 aa6.67□□□□□ -1.34
DEPDC4-205ENST00000548313 ARHGAP27Q6ZUM4 889 aa6.67□□□□□ -1.34
DEPDC4-205ENST00000548313 BAHD1Q8TBE0 780 aaPredicted RBP6.67□□□□□ -1.34
DEPDC4-205ENST00000548313 KIF2CQ99661 725 aa6.67□□□□□ -1.34
DEPDC4-205ENST00000548313 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.67□□□□□ -1.34
DEPDC4-205ENST00000548313 KRTAP4-2Q9BYR5 136 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms