RNA–Protein interactions for RNA: ENST00000548161.1

R3HDM2-212, Transcript of R3H domain containing 2, humanhuman

TSL 3

Gene R3HDM2, Length 802 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-212ENST00000548161 ATP8B2P98198 1209 aa10.36□□□□□ -0.75
R3HDM2-212ENST00000548161 TATDN1Q6P1N9 297 aa10.36□□□□□ -0.75
R3HDM2-212ENST00000548161 CERS3Q8IU89 383 aa10.36□□□□□ -0.75
R3HDM2-212ENST00000548161 EDC3Q96F86 508 aaKnown RBP10.36□□□□□ -0.75
R3HDM2-212ENST00000548161 APBA2Q99767 749 aa10.36□□□□□ -0.75
R3HDM2-212ENST00000548161 PAGR1Q9BTK6 254 aa10.36□□□□□ -0.75
R3HDM2-212ENST00000548161 UBE2OQ9C0C9 1292 aaKnown RBP10.36□□□□□ -0.75
R3HDM2-212ENST00000548161 DBNLQ9UJU6 430 aaKnown RBP10.36□□□□□ -0.75
R3HDM2-212ENST00000548161 RABGAP1Q9Y3P9 1069 aa10.36□□□□□ -0.75
R3HDM2-212ENST00000548161 USP17L15C9J2P7 530 aa10.35□□□□□ -0.75
R3HDM2-212ENST00000548161 USP17L13C9JLJ4 530 aa10.35□□□□□ -0.75
R3HDM2-212ENST00000548161 USP17L11C9JVI0 530 aa10.35□□□□□ -0.75
R3HDM2-212ENST00000548161 USP17L18D6R9N7 530 aa10.35□□□□□ -0.75
R3HDM2-212ENST00000548161 USP17L22D6RA61 530 aa10.35□□□□□ -0.75
R3HDM2-212ENST00000548161 USP17L17D6RBQ6 530 aa10.35□□□□□ -0.75
R3HDM2-212ENST00000548161 USP17L19D6RCP7 530 aa10.35□□□□□ -0.75
R3HDM2-212ENST00000548161 USP17L20D6RJB6 530 aa10.35□□□□□ -0.75
R3HDM2-212ENST00000548161 CNMDO75829 334 aa10.35□□□□□ -0.75
R3HDM2-212ENST00000548161 CYP7A1P22680 504 aa10.35□□□□□ -0.75
R3HDM2-212ENST00000548161 CCNA1P78396 465 aa10.35□□□□□ -0.75
R3HDM2-212ENST00000548161 USP17L24Q0WX57 530 aa10.35□□□□□ -0.75
R3HDM2-212ENST00000548161 MAP2K5Q13163 448 aa10.35□□□□□ -0.75
R3HDM2-212ENST00000548161 OS9Q13438 667 aaPredicted RBP10.35□□□□□ -0.75
R3HDM2-212ENST00000548161 LRRC26Q2I0M4 334 aa10.35□□□□□ -0.75
R3HDM2-212ENST00000548161 CATSPERGQ6ZRH7 1159 aa10.35□□□□□ -0.75
R3HDM2-212ENST00000548161 Q7L0L9 218 aa10.35□□□□□ -0.75
R3HDM2-212ENST00000548161 TMEM57Q8N5G2 664 aa10.35□□□□□ -0.75
R3HDM2-212ENST00000548161 EHD4Q9H223 541 aa10.35□□□□□ -0.75
R3HDM2-212ENST00000548161 MTMR10Q9NXD2 777 aa10.35□□□□□ -0.75
R3HDM2-212ENST00000548161 STXBP5LQ9Y2K9 1186 aa10.35□□□□□ -0.75
R3HDM2-212ENST00000548161 NOP58Q9Y2X3 529 aaKnown RBP10.35□□□□□ -0.75
R3HDM2-212ENST00000548161 TTC28Q96AY4 2481 aa10.34□□□□□ -0.75
R3HDM2-212ENST00000548161 MAST2Q6P0Q8 1798 aa10.34□□□□□ -0.75
R3HDM2-212ENST00000548161 SLC15A5A6NIM6 579 aa10.34□□□□□ -0.75
R3HDM2-212ENST00000548161 GLRX3O76003 335 aaKnown RBP10.34□□□□□ -0.75
R3HDM2-212ENST00000548161 PRKCSHP14314 528 aaPredicted RBP10.34□□□□□ -0.75
R3HDM2-212ENST00000548161 PTPREP23469 700 aa10.34□□□□□ -0.75
R3HDM2-212ENST00000548161 USP14P54578 494 aa10.34□□□□□ -0.75
R3HDM2-212ENST00000548161 ZKSCAN2Q63HK3 967 aa10.34□□□□□ -0.75
R3HDM2-212ENST00000548161 TMED8Q6PL24 325 aaPredicted RBP10.34□□□□□ -0.75
R3HDM2-212ENST00000548161 LBX2Q6XYB7 198 aa10.34□□□□□ -0.75
R3HDM2-212ENST00000548161 EAF2Q96CJ1 260 aaPredicted RBP10.34□□□□□ -0.75
R3HDM2-212ENST00000548161 KIAA1683Q9H0B3 1180 aa10.34□□□□□ -0.75
R3HDM2-212ENST00000548161 FLRT1Q9NZU1 646 aa10.34□□□□□ -0.75
R3HDM2-212ENST00000548161 SERPINB13Q9UIV8 391 aa10.34□□□□□ -0.75
R3HDM2-212ENST00000548161 MYH1P12882 1939 aa10.34□□□□□ -0.75
R3HDM2-212ENST00000548161 IDH1O75874 414 aaKnown RBP10.33□□□□□ -0.76
R3HDM2-212ENST00000548161 IGHA2P01877 340 aa10.33□□□□□ -0.76
R3HDM2-212ENST00000548161 HOXC6P09630 235 aa10.33□□□□□ -0.76
R3HDM2-212ENST00000548161 VCAM1P19320 739 aa10.33□□□□□ -0.76
R3HDM2-212ENST00000548161 USP5P45974 858 aa10.33□□□□□ -0.76
R3HDM2-212ENST00000548161 RAB3GAP1Q15042 981 aa10.33□□□□□ -0.76
R3HDM2-212ENST00000548161 ZYXQ15942 572 aaKnown RBP10.33□□□□□ -0.76
R3HDM2-212ENST00000548161 ABCB5Q2M3G0 1257 aa10.33□□□□□ -0.76
R3HDM2-212ENST00000548161 CERKLQ49MI3 558 aaPredicted RBP10.33□□□□□ -0.76
R3HDM2-212ENST00000548161 MFSD14CQ5VZR4 134 aa10.33□□□□□ -0.76
R3HDM2-212ENST00000548161 TTC6Q86TZ1 520 aa10.33□□□□□ -0.76
R3HDM2-212ENST00000548161 MAGEB6Q8N7X4 407 aa10.33□□□□□ -0.76
R3HDM2-212ENST00000548161 MIGA1Q8NAN2 632 aa10.33□□□□□ -0.76
R3HDM2-212ENST00000548161 ACER1Q8TDN7 264 aa10.33□□□□□ -0.76
R3HDM2-212ENST00000548161 FEZ1Q99689 392 aa10.33□□□□□ -0.76
R3HDM2-212ENST00000548161 CCDC8Q9H0W5 538 aaPredicted RBP10.33□□□□□ -0.76
R3HDM2-212ENST00000548161 CWC22Q9HCG8 908 aaKnown RBP10.33□□□□□ -0.76
R3HDM2-212ENST00000548161 TLR7Q9NYK1 1049 aaKnown RBP10.33□□□□□ -0.76
R3HDM2-212ENST00000548161 NDUFB9Q9Y6M9 179 aa10.33□□□□□ -0.76
R3HDM2-212ENST00000548161 CDH23Q9H251 3354 aa10.32□□□□□ -0.76
R3HDM2-212ENST00000548161 POTEB2H3BUK9 544 aa10.32□□□□□ -0.76
R3HDM2-212ENST00000548161 MSCO60682 206 aa10.32□□□□□ -0.76
R3HDM2-212ENST00000548161 GUCY1A2P33402 732 aa10.32□□□□□ -0.76
R3HDM2-212ENST00000548161 SHMT1P34896 483 aa10.32□□□□□ -0.76
R3HDM2-212ENST00000548161 PLCD1P51178 756 aa10.32□□□□□ -0.76
R3HDM2-212ENST00000548161 MDM2Q00987 491 aaPredicted RBP10.32□□□□□ -0.76
R3HDM2-212ENST00000548161 ATP2B2Q01814 1243 aa10.32□□□□□ -0.76
R3HDM2-212ENST00000548161 GRB14Q14449 540 aa10.32□□□□□ -0.76
R3HDM2-212ENST00000548161 LPAR1Q92633 364 aa10.32□□□□□ -0.76
R3HDM2-212ENST00000548161 SENP6Q9GZR1 1112 aaPredicted RBP10.32□□□□□ -0.76
R3HDM2-212ENST00000548161 ANTXR1Q9H6X2 564 aa10.32□□□□□ -0.76
R3HDM2-212ENST00000548161 C1orf115Q9H7X2 142 aa10.32□□□□□ -0.76
R3HDM2-212ENST00000548161 CABP5Q9NP86 173 aa10.32□□□□□ -0.76
R3HDM2-212ENST00000548161 BTBD7Q9P203 1132 aa10.32□□□□□ -0.76
R3HDM2-212ENST00000548161 DDX20Q9UHI6 824 aaKnown RBP10.32□□□□□ -0.76
R3HDM2-212ENST00000548161 SPDYE16A6NNV3 312 aaPredicted RBP10.31□□□□□ -0.76
R3HDM2-212ENST00000548161 MAP3K12Q12852 859 aa10.31□□□□□ -0.76
R3HDM2-212ENST00000548161 WDR78Q5VTH9 848 aa10.31□□□□□ -0.76
R3HDM2-212ENST00000548161 FAM109BQ6ICB4 259 aaPredicted RBP10.31□□□□□ -0.76
R3HDM2-212ENST00000548161 NPLOC4Q8TAT6 608 aa10.31□□□□□ -0.76
R3HDM2-212ENST00000548161 RIOK1Q9BRS2 568 aaKnown RBP10.31□□□□□ -0.76
R3HDM2-212ENST00000548161 RPAP3Q9H6T3 665 aaPredicted RBP10.31□□□□□ -0.76
R3HDM2-212ENST00000548161 IVNS1ABPQ9Y6Y0 642 aa10.31□□□□□ -0.76
R3HDM2-212ENST00000548161 SPTBN5Q9NRC6 3674 aaKnown RBP10.31□□□□□ -0.76
R3HDM2-212ENST00000548161 DNM1LO00429 736 aa10.3□□□□□ -0.76
R3HDM2-212ENST00000548161 STRNO43815 780 aa10.3□□□□□ -0.76
R3HDM2-212ENST00000548161 CNGA1P29973 690 aa10.3□□□□□ -0.76
R3HDM2-212ENST00000548161 CYP2C19P33261 490 aa10.3□□□□□ -0.76
R3HDM2-212ENST00000548161 GABPAQ06546 454 aa10.3□□□□□ -0.76
R3HDM2-212ENST00000548161 COG2Q14746 738 aa10.3□□□□□ -0.76
R3HDM2-212ENST00000548161 TRPV1Q8NER1 839 aa10.3□□□□□ -0.76
R3HDM2-212ENST00000548161 LBHD1Q9BQE6 289 aaPredicted RBP10.3□□□□□ -0.76
R3HDM2-212ENST00000548161 HOXC10Q9NYD6 342 aa10.3□□□□□ -0.76
R3HDM2-212ENST00000548161 FRMPD3Q5JV73 1810 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms