RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 DNAJC2Q99543 621 aaKnown RBP8.15□□□□□ -1.1
SCAF11-211ENST00000547950 CHMP4BQ9H444 224 aaKnown RBP8.15□□□□□ -1.1
SCAF11-211ENST00000547950 AS3MTQ9HBK9 375 aa8.15□□□□□ -1.1
SCAF11-211ENST00000547950 PNMA3Q9UL41 463 aa8.15□□□□□ -1.1
SCAF11-211ENST00000547950 SLC45A1Q9Y2W3 748 aa8.15□□□□□ -1.1
SCAF11-211ENST00000547950 MAGEB6P1A0A0J9YX57 407 aa8.14□□□□□ -1.11
SCAF11-211ENST00000547950 GOLIM4O00461 696 aa8.14□□□□□ -1.11
SCAF11-211ENST00000547950 ARHGAP33O14559 1287 aa8.14□□□□□ -1.11
SCAF11-211ENST00000547950 RAB11FIP3O75154 756 aa8.14□□□□□ -1.11
SCAF11-211ENST00000547950 POLR3DP05423 398 aaPredicted RBP8.14□□□□□ -1.11
SCAF11-211ENST00000547950 ASNSP08243 561 aa8.14□□□□□ -1.11
SCAF11-211ENST00000547950 FLT3LGP49771 235 aa8.14□□□□□ -1.11
SCAF11-211ENST00000547950 PABPC4Q13310 644 aaKnown RBP eCLIP8.14□□□□□ -1.11
SCAF11-211ENST00000547950 MTMR2Q13614 643 aa8.14□□□□□ -1.11
SCAF11-211ENST00000547950 TTF1Q15361 905 aaPredicted RBP8.14□□□□□ -1.11
SCAF11-211ENST00000547950 METTL16Q86W50 562 aaKnown RBP8.14□□□□□ -1.11
SCAF11-211ENST00000547950 PROCA1Q8NCQ7 364 aaPredicted RBP8.14□□□□□ -1.11
SCAF11-211ENST00000547950 WDR18Q9BV38 432 aa8.14□□□□□ -1.11
SCAF11-211ENST00000547950 TBC1D2Q9BYX2 928 aa8.14□□□□□ -1.11
SCAF11-211ENST00000547950 ASCC2Q9H1I8 757 aaPredicted RBP8.14□□□□□ -1.11
SCAF11-211ENST00000547950 DNAJC18Q9H819 358 aa8.14□□□□□ -1.11
SCAF11-211ENST00000547950 TMOD4Q9NZQ9 345 aa8.14□□□□□ -1.11
SCAF11-211ENST00000547950 USP17L10C9JJH3 530 aa8.13□□□□□ -1.11
SCAF11-211ENST00000547950 ADCY3O60266 1144 aa8.13□□□□□ -1.11
SCAF11-211ENST00000547950 GH2P01242 217 aa8.13□□□□□ -1.11
SCAF11-211ENST00000547950 CCL5P13501 91 aa8.13□□□□□ -1.11
SCAF11-211ENST00000547950 ELNP15502 786 aa8.13□□□□□ -1.11
SCAF11-211ENST00000547950 BACE1P56817 501 aa8.13□□□□□ -1.11
SCAF11-211ENST00000547950 IRX3P78415 501 aaPredicted RBP8.13□□□□□ -1.11
SCAF11-211ENST00000547950 SH3D19Q5HYK7 790 aa8.13□□□□□ -1.11
SCAF11-211ENST00000547950 PPP4R3BQ5MIZ7 849 aa8.13□□□□□ -1.11
SCAF11-211ENST00000547950 TTC6Q86TZ1 520 aa8.13□□□□□ -1.11
SCAF11-211ENST00000547950 CERS3Q8IU89 383 aa8.13□□□□□ -1.11
SCAF11-211ENST00000547950 COA7Q96BR5 231 aa8.13□□□□□ -1.11
SCAF11-211ENST00000547950 EDC3Q96F86 508 aaKnown RBP8.13□□□□□ -1.11
SCAF11-211ENST00000547950 P2RX7Q99572 595 aaKnown RBP8.13□□□□□ -1.11
SCAF11-211ENST00000547950 RNF208Q9H0X6 261 aa8.13□□□□□ -1.11
SCAF11-211ENST00000547950 BOLA2Q9H3K6 86 aa8.13□□□□□ -1.11
SCAF11-211ENST00000547950 OTOFQ9HC10 1997 aa8.13□□□□□ -1.11
SCAF11-211ENST00000547950 ZNF532Q9HCE3 1301 aa8.12□□□□□ -1.11
SCAF11-211ENST00000547950 C19orf81C9J6K1 198 aa8.12□□□□□ -1.11
SCAF11-211ENST00000547950 SMARCA5O60264 1052 aaPredicted RBP8.12□□□□□ -1.11
SCAF11-211ENST00000547950 PEX10O60683 326 aa8.12□□□□□ -1.11
SCAF11-211ENST00000547950 PDE6AP16499 860 aa8.12□□□□□ -1.11
SCAF11-211ENST00000547950 GCLCP48506 637 aaPredicted RBP8.12□□□□□ -1.11
SCAF11-211ENST00000547950 PSEN2P49810 448 aa8.12□□□□□ -1.11
SCAF11-211ENST00000547950 PLCD1P51178 756 aa8.12□□□□□ -1.11
SCAF11-211ENST00000547950 UBXN2AP68543 259 aa8.12□□□□□ -1.11
SCAF11-211ENST00000547950 PDE3AQ14432 1141 aa8.12□□□□□ -1.11
SCAF11-211ENST00000547950 RAB3GAP1Q15042 981 aa8.12□□□□□ -1.11
SCAF11-211ENST00000547950 ZYXQ15942 572 aaKnown RBP8.12□□□□□ -1.11
SCAF11-211ENST00000547950 SLFNL1Q499Z3 407 aa8.12□□□□□ -1.11
SCAF11-211ENST00000547950 CERKLQ49MI3 558 aaPredicted RBP8.12□□□□□ -1.11
SCAF11-211ENST00000547950 PPP1R15BQ5SWA1 713 aa8.12□□□□□ -1.11
SCAF11-211ENST00000547950 TATDN1Q6P1N9 297 aa8.12□□□□□ -1.11
SCAF11-211ENST00000547950 RIOK1Q9BRS2 568 aaKnown RBP8.12□□□□□ -1.11
SCAF11-211ENST00000547950 CRISPLD2Q9H0B8 497 aa8.12□□□□□ -1.11
SCAF11-211ENST00000547950 EMILIN3Q9NT22 766 aa8.12□□□□□ -1.11
SCAF11-211ENST00000547950 SERPINB13Q9UIV8 391 aa8.12□□□□□ -1.11
SCAF11-211ENST00000547950 ZBTB21Q9ULJ3 1066 aa8.12□□□□□ -1.11
SCAF11-211ENST00000547950 COL2A1P02458 1487 aaPredicted RBP8.12□□□□□ -1.11
SCAF11-211ENST00000547950 MPHOSPH10O00566 681 aaKnown RBP8.11□□□□□ -1.11
SCAF11-211ENST00000547950 GTPBP6O43824 516 aaPredicted RBP8.11□□□□□ -1.11
SCAF11-211ENST00000547950 TFRCP02786 760 aaKnown RBP8.11□□□□□ -1.11
SCAF11-211ENST00000547950 GJB1P08034 283 aa8.11□□□□□ -1.11
SCAF11-211ENST00000547950 ATP5JP18859 108 aa8.11□□□□□ -1.11
SCAF11-211ENST00000547950 PDE4AP27815 886 aa8.11□□□□□ -1.11
SCAF11-211ENST00000547950 FAM110CQ1W6H9 321 aa8.11□□□□□ -1.11
SCAF11-211ENST00000547950 ABCB5Q2M3G0 1257 aa8.11□□□□□ -1.11
SCAF11-211ENST00000547950 TMED8Q6PL24 325 aaPredicted RBP8.11□□□□□ -1.11
SCAF11-211ENST00000547950 ADGRD1Q6QNK2 874 aa8.11□□□□□ -1.11
SCAF11-211ENST00000547950 USP17L2Q6R6M4 530 aa8.11□□□□□ -1.11
SCAF11-211ENST00000547950 CCAR1Q8IX12 1150 aaKnown RBP8.11□□□□□ -1.11
SCAF11-211ENST00000547950 GPRC5AQ8NFJ5 357 aa8.11□□□□□ -1.11
SCAF11-211ENST00000547950 NKX2-3Q8TAU0 364 aa8.11□□□□□ -1.11
SCAF11-211ENST00000547950 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.11□□□□□ -1.11
SCAF11-211ENST00000547950 SDR42E1Q8WUS8 393 aa8.11□□□□□ -1.11
SCAF11-211ENST00000547950 DPF3Q92784 378 aa8.11□□□□□ -1.11
SCAF11-211ENST00000547950 FEZ1Q99689 392 aa8.11□□□□□ -1.11
SCAF11-211ENST00000547950 CRNKL1Q9BZJ0 848 aaKnown RBP8.11□□□□□ -1.11
SCAF11-211ENST00000547950 LRRCC1Q9C099 1032 aa8.11□□□□□ -1.11
SCAF11-211ENST00000547950 UNC93B1Q9H1C4 597 aa8.11□□□□□ -1.11
SCAF11-211ENST00000547950 ARMT1Q9H993 441 aa8.11□□□□□ -1.11
SCAF11-211ENST00000547950 CABP5Q9NP86 173 aa8.11□□□□□ -1.11
SCAF11-211ENST00000547950 GINM1Q9NU53 330 aa8.11□□□□□ -1.11
SCAF11-211ENST00000547950 PAG1Q9NWQ8 432 aa8.11□□□□□ -1.11
SCAF11-211ENST00000547950 MCM9Q9NXL9 1143 aa8.11□□□□□ -1.11
SCAF11-211ENST00000547950 TNRC18O15417 2968 aaPredicted RBP8.1□□□□□ -1.11
SCAF11-211ENST00000547950 TCRBV5S4A2TA0A5A2 114 aa8.1□□□□□ -1.11
SCAF11-211ENST00000547950 PRKAB2O43741 272 aa8.1□□□□□ -1.11
SCAF11-211ENST00000547950 INHAP05111 366 aa8.1□□□□□ -1.11
SCAF11-211ENST00000547950 CYP2D6P10635 497 aa8.1□□□□□ -1.11
SCAF11-211ENST00000547950 HOXA7P31268 230 aaPredicted RBP8.1□□□□□ -1.11
SCAF11-211ENST00000547950 SHMT1P34896 483 aa8.1□□□□□ -1.11
SCAF11-211ENST00000547950 GJA8P48165 433 aa8.1□□□□□ -1.11
SCAF11-211ENST00000547950 IRF5Q13568 498 aa8.1□□□□□ -1.11
SCAF11-211ENST00000547950 DMRTA1Q5VZB9 504 aa8.1□□□□□ -1.11
SCAF11-211ENST00000547950 LCORLQ8N3X6 602 aa8.1□□□□□ -1.11
SCAF11-211ENST00000547950 ACER1Q8TDN7 264 aa8.1□□□□□ -1.11
SCAF11-211ENST00000547950 OXER1Q8TDS5 423 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms