RNA–Protein interactions for RNA: ENST00000547263.1

GCN1-202, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-202ENST00000547263 AKR1B1P15121 316 aa13.07□□□□□ -0.32
GCN1-202ENST00000547263 HMGCS2P54868 508 aa13.07□□□□□ -0.32
GCN1-202ENST00000547263 SP3Q02447 781 aa13.07□□□□□ -0.32
GCN1-202ENST00000547263 MTMR2Q13614 643 aa13.07□□□□□ -0.32
GCN1-202ENST00000547263 SEPT2Q15019 361 aa13.07□□□□□ -0.32
GCN1-202ENST00000547263 ERICH6BQ5W0A0 696 aa13.07□□□□□ -0.32
GCN1-202ENST00000547263 ACER1Q8TDN7 264 aa13.07□□□□□ -0.32
GCN1-202ENST00000547263 PARK7Q99497 189 aaKnown RBP13.07□□□□□ -0.32
GCN1-202ENST00000547263 CABP5Q9NP86 173 aa13.07□□□□□ -0.32
GCN1-202ENST00000547263 NOVP48745 357 aa13.06□□□□□ -0.32
GCN1-202ENST00000547263 PPARAQ07869 468 aa13.06□□□□□ -0.32
GCN1-202ENST00000547263 DGKZQ13574 1117 aa13.06□□□□□ -0.32
GCN1-202ENST00000547263 PKN2Q16513 984 aaKnown RBP13.06□□□□□ -0.32
GCN1-202ENST00000547263 USP17L2Q6R6M4 530 aa13.06□□□□□ -0.32
GCN1-202ENST00000547263 RILPL2Q969X0 211 aa13.06□□□□□ -0.32
GCN1-202ENST00000547263 NACAP1Q9BZK3 213 aa13.06□□□□□ -0.32
GCN1-202ENST00000547263 TMX2Q9Y320 296 aa13.06□□□□□ -0.32
GCN1-202ENST00000547263 TACC3Q9Y6A5 838 aa13.06□□□□□ -0.32
GCN1-202ENST00000547263 FGAP02671 866 aa13.05□□□□□ -0.32
GCN1-202ENST00000547263 CYP2C8P10632 490 aa13.05□□□□□ -0.32
GCN1-202ENST00000547263 TDO2P48775 406 aa13.05□□□□□ -0.32
GCN1-202ENST00000547263 POTEEQ6S8J3 1075 aa13.05□□□□□ -0.32
GCN1-202ENST00000547263 LBX2Q6XYB7 198 aa13.05□□□□□ -0.32
GCN1-202ENST00000547263 GADL1Q6ZQY3 521 aa13.05□□□□□ -0.32
GCN1-202ENST00000547263 TNS4Q8IZW8 715 aa13.05□□□□□ -0.32
GCN1-202ENST00000547263 ERO1AQ96HE7 468 aa13.05□□□□□ -0.32
GCN1-202ENST00000547263 MCOLN1Q9GZU1 580 aa13.05□□□□□ -0.32
GCN1-202ENST00000547263 NAPBQ9H115 298 aa13.05□□□□□ -0.32
GCN1-202ENST00000547263 IL25Q9H293 177 aa13.05□□□□□ -0.32
GCN1-202ENST00000547263 SYNPO2Q9UMS6 1093 aa13.05□□□□□ -0.32
GCN1-202ENST00000547263 RAD50Q92878 1312 aa13.05□□□□□ -0.32
GCN1-202ENST00000547263 MYH4Q9Y623 1939 aa13.05□□□□□ -0.32
GCN1-202ENST00000547263 MINDY4BA8MYZ0 360 aa13.04□□□□□ -0.32
GCN1-202ENST00000547263 CTGFP29279 349 aa13.04□□□□□ -0.32
GCN1-202ENST00000547263 USP14P54578 494 aa13.04□□□□□ -0.32
GCN1-202ENST00000547263 MFAP1P55081 439 aaKnown RBP13.04□□□□□ -0.32
GCN1-202ENST00000547263 LACTBP83111 547 aaPredicted RBP13.04□□□□□ -0.32
GCN1-202ENST00000547263 PABPC4Q13310 644 aaKnown RBP eCLIP13.04□□□□□ -0.32
GCN1-202ENST00000547263 RAB3GAP1Q15042 981 aa13.04□□□□□ -0.32
GCN1-202ENST00000547263 OTOP1Q7RTM1 612 aa13.04□□□□□ -0.32
GCN1-202ENST00000547263 DSCC1Q9BVC3 393 aa13.04□□□□□ -0.32
GCN1-202ENST00000547263 NBPF3Q9H094 633 aa13.04□□□□□ -0.32
GCN1-202ENST00000547263 ASCC2Q9H1I8 757 aaPredicted RBP13.04□□□□□ -0.32
GCN1-202ENST00000547263 KANSL2Q9H9L4 492 aa13.04□□□□□ -0.32
GCN1-202ENST00000547263 MORF4L1Q9UBU8 362 aa13.04□□□□□ -0.32
GCN1-202ENST00000547263 PNMA3Q9UL41 463 aa13.04□□□□□ -0.32
GCN1-202ENST00000547263 ORC4O43929 436 aa13.03□□□□□ -0.32
GCN1-202ENST00000547263 GNRH1P01148 92 aa13.03□□□□□ -0.32
GCN1-202ENST00000547263 VCAM1P19320 739 aa13.03□□□□□ -0.32
GCN1-202ENST00000547263 CHMLP26374 656 aa13.03□□□□□ -0.32
GCN1-202ENST00000547263 FAM110CQ1W6H9 321 aa13.03□□□□□ -0.32
GCN1-202ENST00000547263 KIAA1755Q5JYT7 1200 aa13.03□□□□□ -0.32
GCN1-202ENST00000547263 FBXO46Q6PJ61 603 aaPredicted RBP13.03□□□□□ -0.32
GCN1-202ENST00000547263 NEDD1Q8NHV4 660 aa13.03□□□□□ -0.32
GCN1-202ENST00000547263 CD99L2Q8TCZ2 262 aa13.03□□□□□ -0.32
GCN1-202ENST00000547263 MKL1Q969V6 931 aa13.03□□□□□ -0.32
GCN1-202ENST00000547263 ZNF287Q9HBT7 754 aa13.03□□□□□ -0.32
GCN1-202ENST00000547263 TMOD4Q9NZQ9 345 aa13.03□□□□□ -0.32
GCN1-202ENST00000547263 NYAP2Q9P242 653 aa13.03□□□□□ -0.32
GCN1-202ENST00000547263 PLXNB2O15031 1838 aa13.03□□□□□ -0.32
GCN1-202ENST00000547263 DOCK3Q8IZD9 2030 aa13.02□□□□□ -0.33
GCN1-202ENST00000547263 APPP05067 770 aa13.02□□□□□ -0.33
GCN1-202ENST00000547263 PCP11498 1178 aaKnown RBP13.02□□□□□ -0.33
GCN1-202ENST00000547263 GCLCP48506 637 aaPredicted RBP13.02□□□□□ -0.33
GCN1-202ENST00000547263 NT5C2P49902 561 aa13.02□□□□□ -0.33
GCN1-202ENST00000547263 ICA1Q05084 483 aa13.02□□□□□ -0.33
GCN1-202ENST00000547263 BMP2KLQ5H9B9 411 aa13.02□□□□□ -0.33
GCN1-202ENST00000547263 CWC27Q6UX04 472 aaKnown RBP13.02□□□□□ -0.33
GCN1-202ENST00000547263 CATSPERGQ6ZRH7 1159 aa13.02□□□□□ -0.33
GCN1-202ENST00000547263 CLEC10AQ8IUN9 316 aa13.02□□□□□ -0.33
GCN1-202ENST00000547263 LPAR1Q92633 364 aa13.02□□□□□ -0.33
GCN1-202ENST00000547263 ABHD8Q96I13 439 aa13.02□□□□□ -0.33
GCN1-202ENST00000547263 VCPKMTQ9H867 229 aa13.02□□□□□ -0.33
GCN1-202ENST00000547263 DIAPH3Q9NSV4 1193 aa13.02□□□□□ -0.33
GCN1-202ENST00000547263 CPA4Q9UI42 421 aa13.02□□□□□ -0.33
GCN1-202ENST00000547263 RBBP6Q7Z6E9 1792 aaKnown RBP13.02□□□□□ -0.33
GCN1-202ENST00000547263 USP17L15C9J2P7 530 aa13.01□□□□□ -0.33
GCN1-202ENST00000547263 USP17L13C9JLJ4 530 aa13.01□□□□□ -0.33
GCN1-202ENST00000547263 USP17L11C9JVI0 530 aa13.01□□□□□ -0.33
GCN1-202ENST00000547263 USP17L18D6R9N7 530 aa13.01□□□□□ -0.33
GCN1-202ENST00000547263 USP17L22D6RA61 530 aa13.01□□□□□ -0.33
GCN1-202ENST00000547263 USP17L17D6RBQ6 530 aa13.01□□□□□ -0.33
GCN1-202ENST00000547263 USP17L19D6RCP7 530 aa13.01□□□□□ -0.33
GCN1-202ENST00000547263 USP17L20D6RJB6 530 aa13.01□□□□□ -0.33
GCN1-202ENST00000547263 SGSM2O43147 1006 aa13.01□□□□□ -0.33
GCN1-202ENST00000547263 EEF2P13639 858 aaKnown RBP13.01□□□□□ -0.33
GCN1-202ENST00000547263 OSBPP22059 807 aa13.01□□□□□ -0.33
GCN1-202ENST00000547263 HERVK_113P62684 666 aa13.01□□□□□ -0.33
GCN1-202ENST00000547263 PDE4BQ07343 736 aa13.01□□□□□ -0.33
GCN1-202ENST00000547263 USP17L24Q0WX57 530 aa13.01□□□□□ -0.33
GCN1-202ENST00000547263 IFFO2Q5TF58 517 aa13.01□□□□□ -0.33
GCN1-202ENST00000547263 GTF3C2Q8WUA4 911 aaPredicted RBP13.01□□□□□ -0.33
GCN1-202ENST00000547263 ARHGAP39Q9C0H5 1083 aa13.01□□□□□ -0.33
GCN1-202ENST00000547263 ARHGEF10LQ9HCE6 1279 aa13.01□□□□□ -0.33
GCN1-202ENST00000547263 MTMR4Q9NYA4 1195 aa13.01□□□□□ -0.33
GCN1-202ENST00000547263 PTPN22Q9Y2R2 807 aa13.01□□□□□ -0.33
GCN1-202ENST00000547263 MYPNQ86TC9 1320 aa13.01□□□□□ -0.33
GCN1-202ENST00000547263 MPHOSPH10O00566 681 aaKnown RBP13□□□□□ -0.33
GCN1-202ENST00000547263 CENPBP07199 599 aaPredicted RBP13□□□□□ -0.33
GCN1-202ENST00000547263 SLC3A2P08195 630 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms