RNA–Protein interactions for RNA: ENST00000546947.5

CCDC38-205, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 4

Gene CCDC38, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-205ENST00000546947 SLC44A5Q8NCS7 719 aa17.71■□□□□ 0.43
CCDC38-205ENST00000546947 C12orf42Q96LP6 360 aa17.71■□□□□ 0.43
CCDC38-205ENST00000546947 CCDC17Q96LX7 622 aa17.71■□□□□ 0.43
CCDC38-205ENST00000546947 ASCC2Q9H1I8 757 aaPredicted RBP17.71■□□□□ 0.43
CCDC38-205ENST00000546947 CYP2D7A0A087X1C5 515 aa17.7■□□□□ 0.42
CCDC38-205ENST00000546947 PATL2C9JE40 543 aaKnown RBP17.7■□□□□ 0.42
CCDC38-205ENST00000546947 MPHOSPH10O00566 681 aaKnown RBP17.7■□□□□ 0.42
CCDC38-205ENST00000546947 FMNL1O95466 1100 aaPredicted RBP17.7■□□□□ 0.42
CCDC38-205ENST00000546947 CTGFP29279 349 aa17.7■□□□□ 0.42
CCDC38-205ENST00000546947 CDK8P49336 464 aa17.7■□□□□ 0.42
CCDC38-205ENST00000546947 IRX3P78415 501 aaPredicted RBP17.7■□□□□ 0.42
CCDC38-205ENST00000546947 SEPT2Q15019 361 aa17.7■□□□□ 0.42
CCDC38-205ENST00000546947 FAM110CQ1W6H9 321 aa17.7■□□□□ 0.42
CCDC38-205ENST00000546947 TICAM2Q86XR7 235 aa17.7■□□□□ 0.42
CCDC38-205ENST00000546947 FEZ1Q99689 392 aa17.7■□□□□ 0.42
CCDC38-205ENST00000546947 KIAA1683Q9H0B3 1180 aa17.7■□□□□ 0.42
CCDC38-205ENST00000546947 EMILIN3Q9NT22 766 aa17.7■□□□□ 0.42
CCDC38-205ENST00000546947 FCGRTP55899 365 aa17.69■□□□□ 0.42
CCDC38-205ENST00000546947 ANKRD13CQ8N6S4 541 aa17.69■□□□□ 0.42
CCDC38-205ENST00000546947 TRIM47Q96LD4 638 aa17.69■□□□□ 0.42
CCDC38-205ENST00000546947 SEC62Q99442 399 aaKnown RBP17.69■□□□□ 0.42
CCDC38-205ENST00000546947 SRRDQ9UH36 339 aa17.69■□□□□ 0.42
CCDC38-205ENST00000546947 PTCH2Q9Y6C5 1203 aa17.69■□□□□ 0.42
CCDC38-205ENST00000546947 ACER1Q8TDN7 264 aa17.68■□□□□ 0.42
CCDC38-205ENST00000546947 ARMC5Q96C12 935 aa17.68■□□□□ 0.42
CCDC38-205ENST00000546947 OSBPL3Q9H4L5 887 aa17.68■□□□□ 0.42
CCDC38-205ENST00000546947 EPB41L4AQ9HCS5 686 aaPredicted RBP17.68■□□□□ 0.42
CCDC38-205ENST00000546947 RBBP6Q7Z6E9 1792 aaKnown RBP17.68■□□□□ 0.42
CCDC38-205ENST00000546947 ROBO3Q96MS0 1386 aa17.67■□□□□ 0.42
CCDC38-205ENST00000546947 GREB1LQ9C091 1923 aaPredicted RBP17.67■□□□□ 0.42
CCDC38-205ENST00000546947 SMIM22K7EJ46 135 aa17.67■□□□□ 0.42
CCDC38-205ENST00000546947 ECM2O94769 699 aaPredicted RBP17.67■□□□□ 0.42
CCDC38-205ENST00000546947 APPP05067 770 aa17.67■□□□□ 0.42
CCDC38-205ENST00000546947 AKR1B1P15121 316 aa17.67■□□□□ 0.42
CCDC38-205ENST00000546947 TDO2P48775 406 aa17.67■□□□□ 0.42
CCDC38-205ENST00000546947 SOX10P56693 466 aa17.67■□□□□ 0.42
CCDC38-205ENST00000546947 IRX6P78412 446 aaPredicted RBP17.67■□□□□ 0.42
CCDC38-205ENST00000546947 ZYXQ15942 572 aaKnown RBP17.67■□□□□ 0.42
CCDC38-205ENST00000546947 NBPF11Q86T75 865 aa17.67■□□□□ 0.42
CCDC38-205ENST00000546947 PLEKHM2Q8IWE5 1019 aa17.67■□□□□ 0.42
CCDC38-205ENST00000546947 IFNL3Q8IZI9 196 aa17.67■□□□□ 0.42
CCDC38-205ENST00000546947 GTF3C2Q8WUA4 911 aaPredicted RBP17.67■□□□□ 0.42
CCDC38-205ENST00000546947 NACAP1Q9BZK3 213 aa17.67■□□□□ 0.42
CCDC38-205ENST00000546947 MINDY4BA8MYZ0 360 aa17.66■□□□□ 0.42
CCDC38-205ENST00000546947 TRIM6-TRIM34B2RNG4 842 aa17.66■□□□□ 0.42
CCDC38-205ENST00000546947 USP17L15C9J2P7 530 aa17.66■□□□□ 0.42
CCDC38-205ENST00000546947 USP17L13C9JLJ4 530 aa17.66■□□□□ 0.42
CCDC38-205ENST00000546947 USP17L11C9JVI0 530 aa17.66■□□□□ 0.42
CCDC38-205ENST00000546947 USP17L18D6R9N7 530 aa17.66■□□□□ 0.42
CCDC38-205ENST00000546947 USP17L22D6RA61 530 aa17.66■□□□□ 0.42
CCDC38-205ENST00000546947 USP17L17D6RBQ6 530 aa17.66■□□□□ 0.42
CCDC38-205ENST00000546947 USP17L19D6RCP7 530 aa17.66■□□□□ 0.42
CCDC38-205ENST00000546947 USP17L20D6RJB6 530 aa17.66■□□□□ 0.42
CCDC38-205ENST00000546947 HERVK_113P62684 666 aa17.66■□□□□ 0.42
CCDC38-205ENST00000546947 USP17L24Q0WX57 530 aa17.66■□□□□ 0.42
CCDC38-205ENST00000546947 SLC9C1Q4G0N8 1177 aa17.66■□□□□ 0.42
CCDC38-205ENST00000546947 P2RX7Q99572 595 aaKnown RBP17.66■□□□□ 0.42
CCDC38-205ENST00000546947 HELLSQ9NRZ9 838 aa17.66■□□□□ 0.42
CCDC38-205ENST00000546947 MORF4L1Q9UBU8 362 aa17.66■□□□□ 0.42
CCDC38-205ENST00000546947 MYPNQ86TC9 1320 aa17.66■□□□□ 0.42
CCDC38-205ENST00000546947 TNPO2O14787 897 aaKnown RBP17.65■□□□□ 0.42
CCDC38-205ENST00000546947 VCAM1P19320 739 aa17.65■□□□□ 0.42
CCDC38-205ENST00000546947 ICA1Q05084 483 aa17.65■□□□□ 0.42
CCDC38-205ENST00000546947 RAET1EQ8TD07 263 aa17.65■□□□□ 0.42
CCDC38-205ENST00000546947 SH2D4AQ9H788 454 aa17.65■□□□□ 0.42
CCDC38-205ENST00000546947 ZNF287Q9HBT7 754 aa17.65■□□□□ 0.42
CCDC38-205ENST00000546947 ARHGEF10LQ9HCE6 1279 aa17.65■□□□□ 0.42
CCDC38-205ENST00000546947 DOCK3Q8IZD9 2030 aa17.65■□□□□ 0.42
CCDC38-205ENST00000546947 A0A1W2PRG0 241 aa17.64■□□□□ 0.41
CCDC38-205ENST00000546947 CATSPERGQ6ZRH7 1159 aa17.64■□□□□ 0.41
CCDC38-205ENST00000546947 RILPL2Q969X0 211 aa17.64■□□□□ 0.41
CCDC38-205ENST00000546947 ZNF333Q96JL9 665 aa17.64■□□□□ 0.41
CCDC38-205ENST00000546947 NAPBQ9H115 298 aa17.64■□□□□ 0.41
CCDC38-205ENST00000546947 MKNK2Q9HBH9 465 aa17.64■□□□□ 0.41
CCDC38-205ENST00000546947 RASA1P20936 1047 aa17.63■□□□□ 0.41
CCDC38-205ENST00000546947 MLLT1Q03111 559 aaPredicted RBP17.63■□□□□ 0.41
CCDC38-205ENST00000546947 PRKCZQ05513 592 aa17.63■□□□□ 0.41
CCDC38-205ENST00000546947 CCDC129Q6ZRS4 1044 aa17.63■□□□□ 0.41
CCDC38-205ENST00000546947 COA7Q96BR5 231 aa17.63■□□□□ 0.41
CCDC38-205ENST00000546947 RPAP3Q9H6T3 665 aaPredicted RBP17.63■□□□□ 0.41
CCDC38-205ENST00000546947 KANSL2Q9H9L4 492 aa17.63■□□□□ 0.41
CCDC38-205ENST00000546947 TMX2Q9Y320 296 aa17.63■□□□□ 0.41
CCDC38-205ENST00000546947 MCMDC2Q4G0Z9 681 aa17.62■□□□□ 0.41
CCDC38-205ENST00000546947 LBX2Q6XYB7 198 aa17.62■□□□□ 0.41
CCDC38-205ENST00000546947 SIAH1Q8IUQ4 282 aa17.62■□□□□ 0.41
CCDC38-205ENST00000546947 GPRC5AQ8NFJ5 357 aa17.62■□□□□ 0.41
CCDC38-205ENST00000546947 LPAR1Q92633 364 aa17.62■□□□□ 0.41
CCDC38-205ENST00000546947 GABRQQ9UN88 632 aa17.62■□□□□ 0.41
CCDC38-205ENST00000546947 MYH4Q9Y623 1939 aa17.62■□□□□ 0.41
CCDC38-205ENST00000546947 BRCA2P51587 3418 aa17.61■□□□□ 0.41
CCDC38-205ENST00000546947 SLC3A2P08195 630 aaKnown RBP17.61■□□□□ 0.41
CCDC38-205ENST00000546947 GRK4P32298 578 aa17.61■□□□□ 0.41
CCDC38-205ENST00000546947 FLT3LGP49771 235 aa17.61■□□□□ 0.41
CCDC38-205ENST00000546947 ERVK-9P63128 1117 aa17.61■□□□□ 0.41
CCDC38-205ENST00000546947 ERVK-24P63145 666 aa17.61■□□□□ 0.41
CCDC38-205ENST00000546947 PDE4BQ07343 736 aa17.61■□□□□ 0.41
CCDC38-205ENST00000546947 PPARAQ07869 468 aa17.61■□□□□ 0.41
CCDC38-205ENST00000546947 IRF5Q13568 498 aa17.61■□□□□ 0.41
CCDC38-205ENST00000546947 CLEC10AQ8IUN9 316 aa17.61■□□□□ 0.41
CCDC38-205ENST00000546947 ZNF444Q8N0Y2 327 aaPredicted RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms