RNA–Protein interactions for RNA: ENST00000546776.5

TROAP-204, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 1,011 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-204ENST00000546776 SMIM22K7EJ46 135 aa13.19□□□□□ -0.3
TROAP-204ENST00000546776 CPA1P15085 419 aa13.19□□□□□ -0.3
TROAP-204ENST00000546776 RASA1P20936 1047 aa13.19□□□□□ -0.3
TROAP-204ENST00000546776 SHMT1P34896 483 aa13.19□□□□□ -0.3
TROAP-204ENST00000546776 EXOSC10Q01780 885 aaKnown RBP13.19□□□□□ -0.3
TROAP-204ENST00000546776 EVX2Q03828 476 aa13.19□□□□□ -0.3
TROAP-204ENST00000546776 MKRN3Q13064 507 aaKnown RBP13.19□□□□□ -0.3
TROAP-204ENST00000546776 CERKLQ49MI3 558 aaPredicted RBP13.19□□□□□ -0.3
TROAP-204ENST00000546776 OTUD7BQ6GQQ9 843 aa13.19□□□□□ -0.3
TROAP-204ENST00000546776 TATDN1Q6P1N9 297 aa13.19□□□□□ -0.3
TROAP-204ENST00000546776 MIGA2Q7L4E1 593 aa13.19□□□□□ -0.3
TROAP-204ENST00000546776 HSCBQ8IWL3 235 aa13.19□□□□□ -0.3
TROAP-204ENST00000546776 CDAN1Q8IWY9 1227 aa13.19□□□□□ -0.3
TROAP-204ENST00000546776 TMTC2Q8N394 836 aa13.19□□□□□ -0.3
TROAP-204ENST00000546776 SLC44A5Q8NCS7 719 aa13.19□□□□□ -0.3
TROAP-204ENST00000546776 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.19□□□□□ -0.33e-11■□□□□ 9.2
TROAP-204ENST00000546776 WNK4Q96J92 1243 aa13.19□□□□□ -0.3
TROAP-204ENST00000546776 CLMNQ96JQ2 1002 aa13.19□□□□□ -0.3
TROAP-204ENST00000546776 ELP3Q9H9T3 547 aa13.19□□□□□ -0.3
TROAP-204ENST00000546776 CABP5Q9NP86 173 aa13.19□□□□□ -0.3
TROAP-204ENST00000546776 INCENPQ9NQS7 918 aa13.19□□□□□ -0.3
TROAP-204ENST00000546776 PCNTO95613 3336 aa13.18□□□□□ -0.3
TROAP-204ENST00000546776 IFIT3O14879 490 aaKnown RBP13.18□□□□□ -0.3
TROAP-204ENST00000546776 TM4SF4P48230 202 aa13.18□□□□□ -0.3
TROAP-204ENST00000546776 MAP3K10Q02779 954 aa13.18□□□□□ -0.3
TROAP-204ENST00000546776 VGLL4Q14135 290 aa13.18□□□□□ -0.3
TROAP-204ENST00000546776 TMEM67Q5HYA8 995 aa13.18□□□□□ -0.3
TROAP-204ENST00000546776 Q6ZUG5 572 aa13.18□□□□□ -0.3
TROAP-204ENST00000546776 FBXL16Q8N461 479 aa13.18□□□□□ -0.3
TROAP-204ENST00000546776 NEDD1Q8NHV4 660 aa13.18□□□□□ -0.3
TROAP-204ENST00000546776 SNX21Q969T3 373 aa13.18□□□□□ -0.3
TROAP-204ENST00000546776 OPTNQ96CV9 577 aa13.18□□□□□ -0.3
TROAP-204ENST00000546776 TTC14Q96N46 770 aa13.18□□□□□ -0.3
TROAP-204ENST00000546776 ZSCAN10Q96SZ4 725 aaPredicted RBP13.18□□□□□ -0.3
TROAP-204ENST00000546776 ZIC5Q96T25 663 aa13.18□□□□□ -0.3
TROAP-204ENST00000546776 GINM1Q9NU53 330 aa13.18□□□□□ -0.3
TROAP-204ENST00000546776 PLIN4Q96Q06 1357 aa13.18□□□□□ -0.3
TROAP-204ENST00000546776 FAM196BA6NMK8 535 aa13.17□□□□□ -0.3
TROAP-204ENST00000546776 MPHOSPH10O00566 681 aaKnown RBP13.17□□□□□ -0.3
TROAP-204ENST00000546776 ALDH1A1P00352 501 aa13.17□□□□□ -0.3
TROAP-204ENST00000546776 HSPA8P11142 646 aaKnown RBP13.17□□□□□ -0.3
TROAP-204ENST00000546776 LIFRP42702 1097 aa13.17□□□□□ -0.3
TROAP-204ENST00000546776 LBX1P52954 281 aa13.17□□□□□ -0.3
TROAP-204ENST00000546776 WTAPQ15007 396 aa13.17□□□□□ -0.3
TROAP-204ENST00000546776 ABCB5Q2M3G0 1257 aa13.17□□□□□ -0.3
TROAP-204ENST00000546776 FAM47AQ5JRC9 791 aa13.17□□□□□ -0.3
TROAP-204ENST00000546776 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.17□□□□□ -0.3
TROAP-204ENST00000546776 TMEM179Q6ZVK1 233 aa13.17□□□□□ -0.3
TROAP-204ENST00000546776 CYB5R4Q7L1T6 521 aa13.17□□□□□ -0.3
TROAP-204ENST00000546776 CHST3Q7LGC8 479 aa13.17□□□□□ -0.3
TROAP-204ENST00000546776 ERO1BQ86YB8 467 aa13.17□□□□□ -0.3
TROAP-204ENST00000546776 DNAJC18Q9H819 358 aa13.17□□□□□ -0.3
TROAP-204ENST00000546776 TCP11L1Q9NUJ3 509 aa13.17□□□□□ -0.3
TROAP-204ENST00000546776 DAXXQ9UER7 740 aaPredicted RBP13.17□□□□□ -0.3
TROAP-204ENST00000546776 TACC3Q9Y6A5 838 aa13.17□□□□□ -0.3
TROAP-204ENST00000546776 ATAD5Q96QE3 1844 aa13.17□□□□□ -0.3
TROAP-204ENST00000546776 TNKSO95271 1327 aa13.16□□□□□ -0.3
TROAP-204ENST00000546776 CCDC69A6NI79 296 aa13.16□□□□□ -0.3
TROAP-204ENST00000546776 TRPA1O75762 1119 aa13.16□□□□□ -0.3
TROAP-204ENST00000546776 AKR1B1P15121 316 aa13.16□□□□□ -0.3
TROAP-204ENST00000546776 GTF2A2P52657 109 aa13.16□□□□□ -0.3
TROAP-204ENST00000546776 AK2P54819 239 aa13.16□□□□□ -0.3
TROAP-204ENST00000546776 ANTXR2P58335 489 aa13.16□□□□□ -0.3
TROAP-204ENST00000546776 IFIT1BQ5T764 474 aaKnown RBP13.16□□□□□ -0.3
TROAP-204ENST00000546776 SYNE3Q6ZMZ3 975 aa13.16□□□□□ -0.3
TROAP-204ENST00000546776 NFXL1Q6ZNB6 911 aa13.16□□□□□ -0.3
TROAP-204ENST00000546776 DGKHQ86XP1 1220 aa13.16□□□□□ -0.3
TROAP-204ENST00000546776 BRF1Q92994 677 aa13.16□□□□□ -0.3
TROAP-204ENST00000546776 CHMP4CQ96CF2 233 aa13.16□□□□□ -0.3
TROAP-204ENST00000546776 ZSCAN31Q96LW9 406 aaPredicted RBP13.16□□□□□ -0.3
TROAP-204ENST00000546776 TCEANC2Q96MN5 208 aa13.16□□□□□ -0.3
TROAP-204ENST00000546776 AGXT2Q9BYV1 514 aa13.16□□□□□ -0.3
TROAP-204ENST00000546776 PICK1Q9NRD5 415 aa13.16□□□□□ -0.3
TROAP-204ENST00000546776 RNF186Q9NXI6 227 aa13.16□□□□□ -0.3
TROAP-204ENST00000546776 ZNF112Q9UJU3 913 aa13.16□□□□□ -0.3
TROAP-204ENST00000546776 LIMCH1Q9UPQ0 1083 aa13.16□□□□□ -0.3
TROAP-204ENST00000546776 GREB1LQ9C091 1923 aaPredicted RBP13.15□□□□□ -0.3
TROAP-204ENST00000546776 SPDYE5A6NIY4 337 aa13.15□□□□□ -0.3
TROAP-204ENST00000546776 SH2B2O14492 632 aaPredicted RBP13.15□□□□□ -0.3
TROAP-204ENST00000546776 CTNND1O60716 968 aaKnown RBP13.15□□□□□ -0.3
TROAP-204ENST00000546776 ASNSP08243 561 aa13.15□□□□□ -0.3
TROAP-204ENST00000546776 IGDCC4Q8TDY8 1250 aa13.15□□□□□ -0.3
TROAP-204ENST00000546776 ZKSCAN4Q969J2 545 aaPredicted RBP13.15□□□□□ -0.3
TROAP-204ENST00000546776 OTUD5Q96G74 571 aa13.15□□□□□ -0.3
TROAP-204ENST00000546776 ZKSCAN3Q9BRR0 538 aa13.15□□□□□ -0.3
TROAP-204ENST00000546776 LRRC2Q9BYS8 371 aa13.15□□□□□ -0.3
TROAP-204ENST00000546776 KANSL2Q9H9L4 492 aa13.15□□□□□ -0.3
TROAP-204ENST00000546776 SH2B1Q9NRF2 756 aaPredicted RBP13.15□□□□□ -0.3
TROAP-204ENST00000546776 MYH4Q9Y623 1939 aa13.15□□□□□ -0.3
TROAP-204ENST00000546776 DOCK1Q14185 1865 aa13.14□□□□□ -0.31
TROAP-204ENST00000546776 K7ELQ4 463 aaPredicted RBP13.14□□□□□ -0.31
TROAP-204ENST00000546776 GDF11O95390 407 aa13.14□□□□□ -0.31
TROAP-204ENST00000546776 GH2P01242 217 aa13.14□□□□□ -0.31
TROAP-204ENST00000546776 CAP2P40123 477 aa13.14□□□□□ -0.31
TROAP-204ENST00000546776 PPATQ06203 517 aa13.14□□□□□ -0.31
TROAP-204ENST00000546776 PPIL2Q13356 520 aa13.14□□□□□ -0.31
TROAP-204ENST00000546776 SNAPC2Q13487 334 aa13.14□□□□□ -0.31
TROAP-204ENST00000546776 TOB2Q14106 344 aaPredicted RBP13.14□□□□□ -0.31
TROAP-204ENST00000546776 NOL9Q5SY16 702 aaKnown RBP13.14□□□□□ -0.31
TROAP-204ENST00000546776 CATIPQ7Z7H3 387 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms