RNA–Protein interactions for RNA: ENST00000546512.5

LINC00661-201, long intergenic non-protein coding RNA 661, humanhuman

TSL 4

Gene LINC00661, Length 544 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-201ENST00000546512 CDK8P49336 464 aa15.59■□□□□ 0.09
LINC00661-201ENST00000546512 FCGRTP55899 365 aa15.59■□□□□ 0.09
LINC00661-201ENST00000546512 ZMYM1Q5SVZ6 1142 aa15.59■□□□□ 0.09
LINC00661-201ENST00000546512 TMEM179Q6ZVK1 233 aa15.59■□□□□ 0.09
LINC00661-201ENST00000546512 ANKRD13CQ8N6S4 541 aa15.59■□□□□ 0.09
LINC00661-201ENST00000546512 ACER1Q8TDN7 264 aa15.59■□□□□ 0.09
LINC00661-201ENST00000546512 EPB41L4AQ9HCS5 686 aaPredicted RBP15.59■□□□□ 0.09
LINC00661-201ENST00000546512 AKR1B1P15121 316 aa15.58■□□□□ 0.08
LINC00661-201ENST00000546512 HOXD10P28358 340 aa15.58■□□□□ 0.08
LINC00661-201ENST00000546512 HOXA7P31268 230 aaPredicted RBP15.58■□□□□ 0.08
LINC00661-201ENST00000546512 GCLCP48506 637 aaPredicted RBP15.58■□□□□ 0.08
LINC00661-201ENST00000546512 TDO2P48775 406 aa15.58■□□□□ 0.08
LINC00661-201ENST00000546512 USP14P54578 494 aa15.58■□□□□ 0.08
LINC00661-201ENST00000546512 PRMT2P55345 433 aa15.58■□□□□ 0.08
LINC00661-201ENST00000546512 SBK1Q52WX2 424 aa15.58■□□□□ 0.08
LINC00661-201ENST00000546512 C12orf42Q96LP6 360 aa15.58■□□□□ 0.08
LINC00661-201ENST00000546512 KIAA1683Q9H0B3 1180 aa15.58■□□□□ 0.08
LINC00661-201ENST00000546512 SRRDQ9UH36 339 aa15.58■□□□□ 0.08
LINC00661-201ENST00000546512 MINDY4BA8MYZ0 360 aa15.57■□□□□ 0.08
LINC00661-201ENST00000546512 PATL2C9JE40 543 aaKnown RBP15.57■□□□□ 0.08
LINC00661-201ENST00000546512 RGS19P49795 217 aa15.57■□□□□ 0.08
LINC00661-201ENST00000546512 FAM110CQ1W6H9 321 aa15.57■□□□□ 0.08
LINC00661-201ENST00000546512 SLC9C1Q4G0N8 1177 aa15.57■□□□□ 0.08
LINC00661-201ENST00000546512 CCDC17Q96LX7 622 aa15.57■□□□□ 0.08
LINC00661-201ENST00000546512 MYH8P13535 1937 aa15.56■□□□□ 0.08
LINC00661-201ENST00000546512 TRIM6-TRIM34B2RNG4 842 aa15.56■□□□□ 0.08
LINC00661-201ENST00000546512 HERVK_113P62684 666 aa15.56■□□□□ 0.08
LINC00661-201ENST00000546512 CLEC10AQ8IUN9 316 aa15.56■□□□□ 0.08
LINC00661-201ENST00000546512 PLEKHM2Q8IWE5 1019 aa15.56■□□□□ 0.08
LINC00661-201ENST00000546512 IFNL3Q8IZI9 196 aa15.56■□□□□ 0.08
LINC00661-201ENST00000546512 STK11IPQ8N1F8 1099 aa15.56■□□□□ 0.08
LINC00661-201ENST00000546512 ARMC5Q96C12 935 aa15.56■□□□□ 0.08
LINC00661-201ENST00000546512 P2RX7Q99572 595 aaKnown RBP15.56■□□□□ 0.08
LINC00661-201ENST00000546512 NACAP1Q9BZK3 213 aa15.56■□□□□ 0.08
LINC00661-201ENST00000546512 MYPNQ86TC9 1320 aa15.56■□□□□ 0.08
LINC00661-201ENST00000546512 ROBO3Q96MS0 1386 aa15.55■□□□□ 0.08
LINC00661-201ENST00000546512 A0A1W2PRG0 241 aa15.55■□□□□ 0.08
LINC00661-201ENST00000546512 USP17L15C9J2P7 530 aa15.55■□□□□ 0.08
LINC00661-201ENST00000546512 USP17L13C9JLJ4 530 aa15.55■□□□□ 0.08
LINC00661-201ENST00000546512 USP17L11C9JVI0 530 aa15.55■□□□□ 0.08
LINC00661-201ENST00000546512 USP17L18D6R9N7 530 aa15.55■□□□□ 0.08
LINC00661-201ENST00000546512 USP17L22D6RA61 530 aa15.55■□□□□ 0.08
LINC00661-201ENST00000546512 USP17L17D6RBQ6 530 aa15.55■□□□□ 0.08
LINC00661-201ENST00000546512 USP17L19D6RCP7 530 aa15.55■□□□□ 0.08
LINC00661-201ENST00000546512 USP17L20D6RJB6 530 aa15.55■□□□□ 0.08
LINC00661-201ENST00000546512 TNPO2O14787 897 aaKnown RBP15.55■□□□□ 0.08
LINC00661-201ENST00000546512 VCAM1P19320 739 aa15.55■□□□□ 0.08
LINC00661-201ENST00000546512 ICA1Q05084 483 aa15.55■□□□□ 0.08
LINC00661-201ENST00000546512 USP17L24Q0WX57 530 aa15.55■□□□□ 0.08
LINC00661-201ENST00000546512 CCDC129Q6ZRS4 1044 aa15.55■□□□□ 0.08
LINC00661-201ENST00000546512 NBPF11Q86T75 865 aa15.55■□□□□ 0.08
LINC00661-201ENST00000546512 RAET1EQ8TD07 263 aa15.55■□□□□ 0.08
LINC00661-201ENST00000546512 RILPL2Q969X0 211 aa15.55■□□□□ 0.08
LINC00661-201ENST00000546512 NAPBQ9H115 298 aa15.55■□□□□ 0.08
LINC00661-201ENST00000546512 OSBPL3Q9H4L5 887 aa15.55■□□□□ 0.08
LINC00661-201ENST00000546512 MKNK2Q9HBH9 465 aa15.55■□□□□ 0.08
LINC00661-201ENST00000546512 MLLT1Q03111 559 aaPredicted RBP15.54■□□□□ 0.08
LINC00661-201ENST00000546512 PRKCZQ05513 592 aa15.54■□□□□ 0.08
LINC00661-201ENST00000546512 SH3TC2Q8TF17 1288 aa15.54■□□□□ 0.08
LINC00661-201ENST00000546512 ZNF333Q96JL9 665 aa15.54■□□□□ 0.08
LINC00661-201ENST00000546512 ARHGEF10LQ9HCE6 1279 aa15.54■□□□□ 0.08
LINC00661-201ENST00000546512 MORF4L1Q9UBU8 362 aa15.54■□□□□ 0.08
LINC00661-201ENST00000546512 MGAMO43451 1857 aa15.54■□□□□ 0.08
LINC00661-201ENST00000546512 CENPFP49454 3210 aa15.54■□□□□ 0.08
LINC00661-201ENST00000546512 PEX10O60683 326 aa15.53■□□□□ 0.08
LINC00661-201ENST00000546512 RASA1P20936 1047 aa15.53■□□□□ 0.08
LINC00661-201ENST00000546512 CATSPERGQ6ZRH7 1159 aa15.53■□□□□ 0.08
LINC00661-201ENST00000546512 TICAM2Q86XR7 235 aa15.53■□□□□ 0.08
LINC00661-201ENST00000546512 SIAH1Q8IUQ4 282 aa15.53■□□□□ 0.08
LINC00661-201ENST00000546512 GTF3C2Q8WUA4 911 aaPredicted RBP15.53■□□□□ 0.08
LINC00661-201ENST00000546512 COA7Q96BR5 231 aa15.53■□□□□ 0.08
LINC00661-201ENST00000546512 FAM227BQ96M60 508 aa15.53■□□□□ 0.08
LINC00661-201ENST00000546512 RPAP3Q9H6T3 665 aaPredicted RBP15.53■□□□□ 0.08
LINC00661-201ENST00000546512 SH2D4AQ9H788 454 aa15.53■□□□□ 0.08
LINC00661-201ENST00000546512 TXNRD2Q9NNW7 524 aa15.53■□□□□ 0.08
LINC00661-201ENST00000546512 HELLSQ9NRZ9 838 aa15.53■□□□□ 0.08
LINC00661-201ENST00000546512 GABRQQ9UN88 632 aa15.53■□□□□ 0.08
LINC00661-201ENST00000546512 A0A0D9SFI3 127 aa15.52■□□□□ 0.08
LINC00661-201ENST00000546512 FOXP2O15409 715 aa15.52■□□□□ 0.08
LINC00661-201ENST00000546512 FLT3LGP49771 235 aa15.52■□□□□ 0.08
LINC00661-201ENST00000546512 ATP2B2Q01814 1243 aa15.52■□□□□ 0.08
LINC00661-201ENST00000546512 GPRC5AQ8NFJ5 357 aa15.52■□□□□ 0.08
LINC00661-201ENST00000546512 PAGR1Q9BTK6 254 aa15.52■□□□□ 0.08
LINC00661-201ENST00000546512 KANSL2Q9H9L4 492 aa15.52■□□□□ 0.08
LINC00661-201ENST00000546512 ZNF287Q9HBT7 754 aa15.52■□□□□ 0.08
LINC00661-201ENST00000546512 RBPJLQ9UBG7 517 aa15.52■□□□□ 0.08
LINC00661-201ENST00000546512 TMX2Q9Y320 296 aa15.52■□□□□ 0.08
LINC00661-201ENST00000546512 PRDM1O75626 825 aa15.51■□□□□ 0.07
LINC00661-201ENST00000546512 MYCP01106 439 aaPredicted RBP15.51■□□□□ 0.07
LINC00661-201ENST00000546512 EEF2P13639 858 aaKnown RBP15.51■□□□□ 0.07
LINC00661-201ENST00000546512 GRK4P32298 578 aa15.51■□□□□ 0.07
LINC00661-201ENST00000546512 NMIQ13287 307 aaPredicted RBP15.51■□□□□ 0.07
LINC00661-201ENST00000546512 MCMDC2Q4G0Z9 681 aa15.51■□□□□ 0.07
LINC00661-201ENST00000546512 VPS53Q5VIR6 699 aa15.51■□□□□ 0.07
LINC00661-201ENST00000546512 LPAR1Q92633 364 aa15.51■□□□□ 0.07
LINC00661-201ENST00000546512 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.51■□□□□ 0.07
LINC00661-201ENST00000546512 TANGO6Q9C0B7 1094 aa15.51■□□□□ 0.07
LINC00661-201ENST00000546512 POTEFA5A3E0 1075 aa15.5■□□□□ 0.07
LINC00661-201ENST00000546512 SLC3A2P08195 630 aaKnown RBP15.5■□□□□ 0.07
LINC00661-201ENST00000546512 ERVK-9P63128 1117 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms