RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 A0A1W2PQD8 194 aa16.62■□□□□ 0.25
HOXC11-202ENST00000546378 TRIM49BA6NDI0 452 aa16.62■□□□□ 0.25
HOXC11-202ENST00000546378 H7C1W4 665 aa16.62■□□□□ 0.25
HOXC11-202ENST00000546378 ATP2B2Q01814 1243 aa16.62■□□□□ 0.25
HOXC11-202ENST00000546378 GJD4Q96KN9 370 aaPredicted RBP16.62■□□□□ 0.25
HOXC11-202ENST00000546378 L2HGDHQ9H9P8 463 aa16.62■□□□□ 0.25
HOXC11-202ENST00000546378 WTAPQ15007 396 aa16.62■□□□□ 0.25
HOXC11-202ENST00000546378 FILIP1LQ4L180 1135 aa16.62■□□□□ 0.25
HOXC11-202ENST00000546378 BARGINQ6ZT62 677 aa16.62■□□□□ 0.25
HOXC11-202ENST00000546378 KIAA1328Q86T90 577 aa16.62■□□□□ 0.25
HOXC11-202ENST00000546378 MB21D2Q8IYB1 491 aaPredicted RBP16.62■□□□□ 0.25
HOXC11-202ENST00000546378 FEZ2Q9UHY8 353 aaPredicted RBP16.62■□□□□ 0.25
HOXC11-202ENST00000546378 IRS4O14654 1257 aaPredicted RBP16.62■□□□□ 0.25
HOXC11-202ENST00000546378 CCP110O43303 1012 aa16.62■□□□□ 0.25
HOXC11-202ENST00000546378 FXR1P51114 621 aaKnown RBP eCLIP16.62■□□□□ 0.25
HOXC11-202ENST00000546378 EVX2Q03828 476 aa16.62■□□□□ 0.25
HOXC11-202ENST00000546378 UBXN1Q04323 297 aa16.62■□□□□ 0.25
HOXC11-202ENST00000546378 TSGA10IPQ3SY00 556 aa16.62■□□□□ 0.25
HOXC11-202ENST00000546378 IL17RAQ96F46 866 aa16.62■□□□□ 0.25
HOXC11-202ENST00000546378 CRYBG1Q9Y4K1 1723 aa16.61■□□□□ 0.25
HOXC11-202ENST00000546378 UBN2Q6ZU65 1347 aa16.61■□□□□ 0.25
HOXC11-202ENST00000546378 SCN11AQ9UI33 1791 aa16.61■□□□□ 0.25
HOXC11-202ENST00000546378 PDIA4P13667 645 aaKnown RBP16.61■□□□□ 0.25
HOXC11-202ENST00000546378 KRT9P35527 623 aa16.61■□□□□ 0.25
HOXC11-202ENST00000546378 SYCP1Q15431 976 aa16.61■□□□□ 0.25
HOXC11-202ENST00000546378 NOSTRINQ8IVI9 506 aa16.61■□□□□ 0.25
HOXC11-202ENST00000546378 CHP1Q99653 195 aa16.61■□□□□ 0.25
HOXC11-202ENST00000546378 RASSF4Q9H2L5 321 aa16.61■□□□□ 0.25
HOXC11-202ENST00000546378 CTAGE9A4FU28 777 aa16.61■□□□□ 0.25
HOXC11-202ENST00000546378 PATL2C9JE40 543 aaKnown RBP16.61■□□□□ 0.25
HOXC11-202ENST00000546378 ATP2C2O75185 946 aa16.61■□□□□ 0.25
HOXC11-202ENST00000546378 BCAMP50895 628 aa16.61■□□□□ 0.25
HOXC11-202ENST00000546378 PPARAQ07869 468 aa16.61■□□□□ 0.25
HOXC11-202ENST00000546378 FAM47AQ5JRC9 791 aa16.61■□□□□ 0.25
HOXC11-202ENST00000546378 MPHOSPH8Q99549 860 aa16.61■□□□□ 0.25
HOXC11-202ENST00000546378 EHD4Q9H223 541 aa16.61■□□□□ 0.25
HOXC11-202ENST00000546378 AHDC1Q5TGY3 1603 aaPredicted RBP16.61■□□□□ 0.25
HOXC11-202ENST00000546378 PXDNLA1KZ92 1463 aa16.61■□□□□ 0.25
HOXC11-202ENST00000546378 CTAGE15A4D2H0 777 aa16.6■□□□□ 0.25
HOXC11-202ENST00000546378 FOXP2O15409 715 aa16.6■□□□□ 0.25
HOXC11-202ENST00000546378 NMT2O60551 498 aa16.6■□□□□ 0.25
HOXC11-202ENST00000546378 CDKL5O76039 1030 aa16.6■□□□□ 0.25
HOXC11-202ENST00000546378 CTAGE8P0CG41 777 aa16.6■□□□□ 0.25
HOXC11-202ENST00000546378 EIF5P55010 431 aaKnown RBP16.6■□□□□ 0.25
HOXC11-202ENST00000546378 CTAGE6Q86UF2 777 aa16.6■□□□□ 0.25
HOXC11-202ENST00000546378 NLRP10Q86W26 655 aa16.6■□□□□ 0.25
HOXC11-202ENST00000546378 CTAGE4Q8IX94 777 aa16.6■□□□□ 0.25
HOXC11-202ENST00000546378 TXLNBQ8N3L3 684 aa16.6■□□□□ 0.25
HOXC11-202ENST00000546378 DISP2A7MBM2 1401 aa16.6■□□□□ 0.25
HOXC11-202ENST00000546378 WNT7AO00755 349 aa16.6■□□□□ 0.25
HOXC11-202ENST00000546378 ZNF185O15231 689 aa16.6■□□□□ 0.25
HOXC11-202ENST00000546378 CD44P16070 742 aaKnown RBP16.6■□□□□ 0.25
HOXC11-202ENST00000546378 EARS2Q5JPH6 523 aaKnown RBP16.6■□□□□ 0.25
HOXC11-202ENST00000546378 PIK3AP1Q6ZUJ8 805 aa16.6■□□□□ 0.25
HOXC11-202ENST00000546378 MICALL1Q8N3F8 863 aa16.6■□□□□ 0.25
HOXC11-202ENST00000546378 SMCR8Q8TEV9 937 aaPredicted RBP16.6■□□□□ 0.25
HOXC11-202ENST00000546378 SH3TC1Q8TE82 1336 aa16.6■□□□□ 0.25
HOXC11-202ENST00000546378 ABCC6O95255 1503 aa16.6■□□□□ 0.25
HOXC11-202ENST00000546378 GNPATO15228 680 aa16.6■□□□□ 0.25
HOXC11-202ENST00000546378 SLC7A5Q01650 507 aa16.6■□□□□ 0.25
HOXC11-202ENST00000546378 ARID5AQ03989 594 aa16.6■□□□□ 0.25
HOXC11-202ENST00000546378 TSR1Q2NL82 804 aaKnown RBP16.6■□□□□ 0.25
HOXC11-202ENST00000546378 CCDC93Q567U6 631 aa16.6■□□□□ 0.25
HOXC11-202ENST00000546378 FNBP4Q8N3X1 1017 aaPredicted RBP16.6■□□□□ 0.25
HOXC11-202ENST00000546378 PROCA1Q8NCQ7 364 aaPredicted RBP16.6■□□□□ 0.25
HOXC11-202ENST00000546378 SYMPKQ92797 1274 aaKnown RBP16.6■□□□□ 0.25
HOXC11-202ENST00000546378 CPVLQ9H3G5 476 aa16.6■□□□□ 0.25
HOXC11-202ENST00000546378 CCNL1Q9UK58 526 aaPredicted RBP16.6■□□□□ 0.25
HOXC11-202ENST00000546378 GDAQ9Y2T3 454 aa16.6■□□□□ 0.25
HOXC11-202ENST00000546378 PDE6AP16499 860 aa16.59■□□□□ 0.25
HOXC11-202ENST00000546378 FAM204AQ9H8W3 233 aa16.59■□□□□ 0.25
HOXC11-202ENST00000546378 VAT1LQ9HCJ6 419 aa16.59■□□□□ 0.25
HOXC11-202ENST00000546378 GNL3LQ9NVN8 582 aaKnown RBP16.59■□□□□ 0.25
HOXC11-202ENST00000546378 RRP15Q9Y3B9 282 aaKnown RBP16.59■□□□□ 0.25
HOXC11-202ENST00000546378 SAMM50Q9Y512 469 aa16.59■□□□□ 0.25
HOXC11-202ENST00000546378 SYNRGQ9UMZ2 1314 aa16.59■□□□□ 0.25
HOXC11-202ENST00000546378 TNS2Q63HR2 1409 aa16.59■□□□□ 0.25
HOXC11-202ENST00000546378 PP2D1A8MPX8 630 aa16.59■□□□□ 0.25
HOXC11-202ENST00000546378 RNF225M0QZC1 329 aaPredicted RBP16.59■□□□□ 0.25
HOXC11-202ENST00000546378 KCTD16Q68DU8 428 aa16.59■□□□□ 0.25
HOXC11-202ENST00000546378 INTS5Q6P9B9 1019 aaKnown RBP16.59■□□□□ 0.25
HOXC11-202ENST00000546378 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.59■□□□□ 0.25
HOXC11-202ENST00000546378 SMARCC1Q92922 1105 aaPredicted RBP16.59■□□□□ 0.25
HOXC11-202ENST00000546378 ISCA1Q9BUE6 129 aa16.59■□□□□ 0.25
HOXC11-202ENST00000546378 EP400Q96L91 3159 aa16.59■□□□□ 0.25
HOXC11-202ENST00000546378 ZEB2O60315 1214 aa16.58■□□□□ 0.25
HOXC11-202ENST00000546378 IL6STP40189 918 aaPredicted RBP16.58■□□□□ 0.25
HOXC11-202ENST00000546378 GPR161Q8N6U8 529 aaKnown RBP16.58■□□□□ 0.25
HOXC11-202ENST00000546378 MRFAP1Q9Y605 127 aa16.58■□□□□ 0.25
HOXC11-202ENST00000546378 TXLNAP40222 546 aa16.58■□□□□ 0.24
HOXC11-202ENST00000546378 LIG3P49916 1009 aa16.58■□□□□ 0.24
HOXC11-202ENST00000546378 FUT8Q9BYC5 575 aa16.58■□□□□ 0.24
HOXC11-202ENST00000546378 EHD2Q9NZN4 543 aa16.58■□□□□ 0.24
HOXC11-202ENST00000546378 UTYO14607 1347 aa16.58■□□□□ 0.24
HOXC11-202ENST00000546378 SRP68Q9UHB9 627 aaKnown RBP16.58■□□□□ 0.24
HOXC11-202ENST00000546378 BCL9LQ86UU0 1499 aa16.57■□□□□ 0.24
HOXC11-202ENST00000546378 A0A087X0B3 334 aa16.57■□□□□ 0.24
HOXC11-202ENST00000546378 PLEKHA8P1O95397 391 aa16.57■□□□□ 0.24
HOXC11-202ENST00000546378 CASP7P55210 303 aa16.57■□□□□ 0.24
HOXC11-202ENST00000546378 CTR9Q6PD62 1173 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms