RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 ANO10Q9NW15 660 aa8.91□□□□□ -0.98
UBR1-202ENST00000546274 ANKRD36CQ5JPF3 1778 aa8.91□□□□□ -0.98
UBR1-202ENST00000546274 KIAA0754O94854 1291 aa8.91□□□□□ -0.98
UBR1-202ENST00000546274 DPCR1Q3MIW9 517 aa8.91□□□□□ -0.98
UBR1-202ENST00000546274 CEP85LQ5SZL2 805 aa8.91□□□□□ -0.98
UBR1-202ENST00000546274 CCDC150Q8NCX0 1101 aa8.91□□□□□ -0.98
UBR1-202ENST00000546274 GDAP1L1Q96MZ0 367 aa8.91□□□□□ -0.98
UBR1-202ENST00000546274 SCLT1Q96NL6 688 aa8.91□□□□□ -0.98
UBR1-202ENST00000546274 NAT10Q9H0A0 1025 aaKnown RBP8.91□□□□□ -0.98
UBR1-202ENST00000546274 RIC1Q4ADV7 1423 aa8.91□□□□□ -0.98
UBR1-202ENST00000546274 RTN2O75298 545 aa8.9□□□□□ -0.98
UBR1-202ENST00000546274 ECEL1O95672 775 aa8.9□□□□□ -0.98
UBR1-202ENST00000546274 RPS6KA3P51812 740 aa8.9□□□□□ -0.98
UBR1-202ENST00000546274 CHMP4BP1P59074 171 aa8.9□□□□□ -0.98
UBR1-202ENST00000546274 TRAF1Q13077 416 aa8.9□□□□□ -0.98
UBR1-202ENST00000546274 RPUSD2Q8IZ73 545 aaKnown RBP8.9□□□□□ -0.98
UBR1-202ENST00000546274 POLR3EQ9NVU0 708 aa8.9□□□□□ -0.98
UBR1-202ENST00000546274 L1RE1Q9UN81 338 aa8.9□□□□□ -0.98
UBR1-202ENST00000546274 SNUPNO95149 360 aaKnown RBP8.9□□□□□ -0.98
UBR1-202ENST00000546274 FGAP02671 866 aa8.9□□□□□ -0.98
UBR1-202ENST00000546274 TUBB4AP04350 444 aa8.9□□□□□ -0.98
UBR1-202ENST00000546274 PYGLP06737 847 aa8.9□□□□□ -0.98
UBR1-202ENST00000546274 HAND2P61296 217 aa8.9□□□□□ -0.98
UBR1-202ENST00000546274 MAP3K9P80192 1104 aa8.9□□□□□ -0.98
UBR1-202ENST00000546274 CEP57L1Q8IYX8 460 aa8.9□□□□□ -0.98
UBR1-202ENST00000546274 SPDYE1Q8NFV5 336 aaPredicted RBP8.9□□□□□ -0.98
UBR1-202ENST00000546274 BPIFA3Q9BQP9 254 aa8.9□□□□□ -0.98
UBR1-202ENST00000546274 PUS7LQ9H0K6 701 aaKnown RBP8.9□□□□□ -0.98
UBR1-202ENST00000546274 MROH7-TTC4A0A0A0MT08 1334 aa8.9□□□□□ -0.98
UBR1-202ENST00000546274 ARAP2Q8WZ64 1704 aa8.9□□□□□ -0.98
UBR1-202ENST00000546274 DOCK2Q92608 1830 aa8.9□□□□□ -0.99
UBR1-202ENST00000546274 AFF2P51816 1311 aa8.9□□□□□ -0.99
UBR1-202ENST00000546274 SHTN1A0MZ66 631 aa8.9□□□□□ -0.99
UBR1-202ENST00000546274 FNBP4Q8N3X1 1017 aaPredicted RBP8.9□□□□□ -0.99
UBR1-202ENST00000546274 CCDC12Q8WUD4 166 aaPredicted RBP8.9□□□□□ -0.99
UBR1-202ENST00000546274 OSBPL5Q9H0X9 879 aaPredicted RBP8.9□□□□□ -0.99
UBR1-202ENST00000546274 KAT14Q9H8E8 782 aa8.9□□□□□ -0.99
UBR1-202ENST00000546274 KIAA1468Q9P260 1216 aa8.9□□□□□ -0.99
UBR1-202ENST00000546274 SLIT2O94813 1529 aa8.89□□□□□ -0.99
UBR1-202ENST00000546274 LRRIQ3A6PVS8 624 aaPredicted RBP8.89□□□□□ -0.99
UBR1-202ENST00000546274 PRC1O43663 620 aa8.89□□□□□ -0.99
UBR1-202ENST00000546274 POLR3DP05423 398 aaPredicted RBP8.89□□□□□ -0.99
UBR1-202ENST00000546274 FKBP4Q02790 459 aaKnown RBP eCLIP8.89□□□□□ -0.99
UBR1-202ENST00000546274 DDR1Q08345 913 aa8.89□□□□□ -0.99
UBR1-202ENST00000546274 KCNB1Q14721 858 aa8.89□□□□□ -0.99
UBR1-202ENST00000546274 NCAPHQ15003 741 aa8.89□□□□□ -0.99
UBR1-202ENST00000546274 KARSQ15046 597 aaKnown RBP8.89□□□□□ -0.99
UBR1-202ENST00000546274 RNF187Q5TA31 235 aaPredicted RBP8.89□□□□□ -0.99
UBR1-202ENST00000546274 PI16Q6UXB8 463 aa8.89□□□□□ -0.99
UBR1-202ENST00000546274 IGSF22Q8N9C0 903 aa8.89□□□□□ -0.99
UBR1-202ENST00000546274 KLHL23Q8NBE8 558 aa8.89□□□□□ -0.99
UBR1-202ENST00000546274 XAGE2Q96GT9 111 aa8.89□□□□□ -0.99
UBR1-202ENST00000546274 NGLY1Q96IV0 654 aa8.89□□□□□ -0.99
UBR1-202ENST00000546274 ISCA1Q9BUE6 129 aa8.89□□□□□ -0.99
UBR1-202ENST00000546274 HSD3B7Q9H2F3 369 aa8.89□□□□□ -0.99
UBR1-202ENST00000546274 DENND2AQ9ULE3 1009 aa8.89□□□□□ -0.99
UBR1-202ENST00000546274 MRFAP1Q9Y605 127 aa8.89□□□□□ -0.99
UBR1-202ENST00000546274 CCP110O43303 1012 aa8.89□□□□□ -0.99
UBR1-202ENST00000546274 YEATS4O95619 227 aa8.89□□□□□ -0.99
UBR1-202ENST00000546274 MYSM1Q5VVJ2 828 aa8.89□□□□□ -0.99
UBR1-202ENST00000546274 CEP112Q8N8E3 955 aa8.89□□□□□ -0.99
UBR1-202ENST00000546274 ANKZF1Q9H8Y5 726 aa8.89□□□□□ -0.99
UBR1-202ENST00000546274 KLC4Q9NSK0 619 aa8.89□□□□□ -0.99
UBR1-202ENST00000546274 DDX20Q9UHI6 824 aaKnown RBP8.89□□□□□ -0.99
UBR1-202ENST00000546274 NRAPQ86VF7 1730 aa8.89□□□□□ -0.99
UBR1-202ENST00000546274 ATRNO75882 1429 aa8.89□□□□□ -0.99
UBR1-202ENST00000546274 ITGB4P16144 1822 aa8.89□□□□□ -0.99
UBR1-202ENST00000546274 PCDH11XQ9BZA7 1347 aa8.89□□□□□ -0.99
UBR1-202ENST00000546274 PCDH11YQ9BZA8 1340 aa8.89□□□□□ -0.99
UBR1-202ENST00000546274 KLF18A0A0U1RQI7 1052 aa8.88□□□□□ -0.99
UBR1-202ENST00000546274 CDR1P51861 262 aa8.88□□□□□ -0.99
UBR1-202ENST00000546274 VSNL1P62760 191 aa8.88□□□□□ -0.99
UBR1-202ENST00000546274 KIF23Q02241 960 aaPredicted RBP8.88□□□□□ -0.99
UBR1-202ENST00000546274 SF3A1Q15459 793 aaKnown RBP8.88□□□□□ -0.99
UBR1-202ENST00000546274 THEMIS2Q5TEJ8 643 aa8.88□□□□□ -0.99
UBR1-202ENST00000546274 RAB11FIP4Q86YS3 637 aa8.88□□□□□ -0.99
UBR1-202ENST00000546274 C3orf20Q8ND61 904 aa8.88□□□□□ -0.99
UBR1-202ENST00000546274 C8orf76Q96K31 380 aa8.88□□□□□ -0.99
UBR1-202ENST00000546274 MPHOSPH8Q99549 860 aa8.88□□□□□ -0.99
UBR1-202ENST00000546274 GOLGA8BA8MQT2 603 aa8.88□□□□□ -0.99
UBR1-202ENST00000546274 TFRCP02786 760 aaKnown RBP8.88□□□□□ -0.99
UBR1-202ENST00000546274 PDHBP11177 359 aa8.88□□□□□ -0.99
UBR1-202ENST00000546274 EZRP15311 586 aaKnown RBP8.88□□□□□ -0.99
UBR1-202ENST00000546274 ZAP70P43403 619 aa8.88□□□□□ -0.99
UBR1-202ENST00000546274 MRPL12P52815 198 aaKnown RBP8.88□□□□□ -0.99
UBR1-202ENST00000546274 IMMTQ16891 758 aaKnown RBP8.88□□□□□ -0.99
UBR1-202ENST00000546274 TBC1D25Q3MII6 688 aa8.88□□□□□ -0.99
UBR1-202ENST00000546274 C1QTNF12Q5T7M4 302 aa8.88□□□□□ -0.99
UBR1-202ENST00000546274 KCNG4Q8TDN1 519 aa8.88□□□□□ -0.99
UBR1-202ENST00000546274 SAAL1Q96ER3 474 aa8.88□□□□□ -0.99
UBR1-202ENST00000546274 C8orf37Q96NL8 207 aa8.88□□□□□ -0.99
UBR1-202ENST00000546274 IRX2Q9BZI1 471 aaPredicted RBP8.88□□□□□ -0.99
UBR1-202ENST00000546274 IMPACTQ9P2X3 320 aa8.88□□□□□ -0.99
UBR1-202ENST00000546274 SPTLC2O15270 562 aa8.88□□□□□ -0.99
UBR1-202ENST00000546274 IRAK1P51617 712 aa8.88□□□□□ -0.99
UBR1-202ENST00000546274 USP4Q13107 963 aa8.88□□□□□ -0.99
UBR1-202ENST00000546274 NKX1-1Q15270 411 aaPredicted RBP8.88□□□□□ -0.99
UBR1-202ENST00000546274 CCDC181Q5TID7 509 aa8.88□□□□□ -0.99
UBR1-202ENST00000546274 TRPC5Q9UL62 973 aaPredicted RBP8.88□□□□□ -0.99
UBR1-202ENST00000546274 ABCC12Q96J65 1359 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms