RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 CCDC84Q86UT8 332 aaPredicted RBP20.71■□□□□ 0.91
CD9-211ENST00000546073 BTBD19C9JJ37 291 aa20.7■□□□□ 0.9
CD9-211ENST00000546073 PRDM1O75626 825 aa20.7■□□□□ 0.9
CD9-211ENST00000546073 TBC1D8O95759 1140 aa20.7■□□□□ 0.9
CD9-211ENST00000546073 IRX3P78415 501 aaPredicted RBP20.7■□□□□ 0.9
CD9-211ENST00000546073 TFAP4Q01664 338 aa20.7■□□□□ 0.9
CD9-211ENST00000546073 KIF22Q14807 665 aa20.7■□□□□ 0.9
CD9-211ENST00000546073 SMCR8Q8TEV9 937 aaPredicted RBP20.7■□□□□ 0.9
CD9-211ENST00000546073 ESR2Q92731 530 aa20.7■□□□□ 0.9
CD9-211ENST00000546073 CNNM2Q9H8M5 875 aa20.7■□□□□ 0.9
CD9-211ENST00000546073 GOPCQ9HD26 462 aa20.7■□□□□ 0.9
CD9-211ENST00000546073 AGTPBP1Q9UPW5 1226 aa20.7■□□□□ 0.9
CD9-211ENST00000546073 SLC45A1Q9Y2W3 748 aa20.7■□□□□ 0.9
CD9-211ENST00000546073 IGF2BP3O00425 579 aaKnown RBP eCLIP20.69■□□□□ 0.9
CD9-211ENST00000546073 RASA1P20936 1047 aa20.69■□□□□ 0.9
CD9-211ENST00000546073 LBX1P52954 281 aa20.69■□□□□ 0.9
CD9-211ENST00000546073 HAND2P61296 217 aa20.69■□□□□ 0.9
CD9-211ENST00000546073 ZYXQ15942 572 aaKnown RBP20.69■□□□□ 0.9
CD9-211ENST00000546073 CCDC178Q5BJE1 867 aa20.69■□□□□ 0.9
CD9-211ENST00000546073 SH3D19Q5HYK7 790 aa20.69■□□□□ 0.9
CD9-211ENST00000546073 AKNAD1Q5T1N1 836 aa20.69■□□□□ 0.9
CD9-211ENST00000546073 SKAP1Q86WV1 359 aa20.69■□□□□ 0.9
CD9-211ENST00000546073 ESYT1Q9BSJ8 1104 aa20.69■□□□□ 0.9
CD9-211ENST00000546073 KRT23Q9C075 422 aa20.69■□□□□ 0.9
CD9-211ENST00000546073 KIAA1683Q9H0B3 1180 aa20.69■□□□□ 0.9
CD9-211ENST00000546073 ANO2Q9NQ90 1003 aa20.69■□□□□ 0.9
CD9-211ENST00000546073 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.69■□□□□ 0.9
CD9-211ENST00000546073 RNF20Q5VTR2 975 aa20.68■□□□□ 0.9
CD9-211ENST00000546073 FAM43AQ8N2R8 423 aa20.68■□□□□ 0.9
CD9-211ENST00000546073 PTPN18Q99952 460 aa20.68■□□□□ 0.9
CD9-211ENST00000546073 EVX2Q03828 476 aa20.67■□□□□ 0.9
CD9-211ENST00000546073 LPAR1Q92633 364 aa20.67■□□□□ 0.9
CD9-211ENST00000546073 CFHR5Q9BXR6 569 aa20.67■□□□□ 0.9
CD9-211ENST00000546073 PRDM10Q9NQV6 1147 aa20.67■□□□□ 0.9
CD9-211ENST00000546073 TSKSQ9UJT2 592 aa20.67■□□□□ 0.9
CD9-211ENST00000546073 ORC4O43929 436 aa20.66■□□□□ 0.9
CD9-211ENST00000546073 TTLL1O95922 423 aa20.66■□□□□ 0.9
CD9-211ENST00000546073 HSPA8P11142 646 aaKnown RBP20.66■□□□□ 0.9
CD9-211ENST00000546073 CRHR2Q13324 411 aa20.66■□□□□ 0.9
CD9-211ENST00000546073 RALYLQ86SE5 291 aaKnown RBP20.66■□□□□ 0.9
CD9-211ENST00000546073 IQCA1Q86XH1 822 aa20.66■□□□□ 0.9
CD9-211ENST00000546073 NEDD1Q8NHV4 660 aa20.66■□□□□ 0.9
CD9-211ENST00000546073 STAG1Q8WVM7 1258 aa20.66■□□□□ 0.9
CD9-211ENST00000546073 CDK5RAP2Q96SN8 1893 aa20.66■□□□□ 0.9
CD9-211ENST00000546073 OTOFQ9HC10 1997 aa20.65■□□□□ 0.9
CD9-211ENST00000546073 DOCK1Q14185 1865 aa20.65■□□□□ 0.9
CD9-211ENST00000546073 THSD7BQ9C0I4 1608 aa20.65■□□□□ 0.9
CD9-211ENST00000546073 USP17L15C9J2P7 530 aa20.65■□□□□ 0.9
CD9-211ENST00000546073 USP17L13C9JLJ4 530 aa20.65■□□□□ 0.9
CD9-211ENST00000546073 USP17L11C9JVI0 530 aa20.65■□□□□ 0.9
CD9-211ENST00000546073 USP17L18D6R9N7 530 aa20.65■□□□□ 0.9
CD9-211ENST00000546073 USP17L22D6RA61 530 aa20.65■□□□□ 0.9
CD9-211ENST00000546073 USP17L17D6RBQ6 530 aa20.65■□□□□ 0.9
CD9-211ENST00000546073 USP17L19D6RCP7 530 aa20.65■□□□□ 0.9
CD9-211ENST00000546073 USP17L20D6RJB6 530 aa20.65■□□□□ 0.9
CD9-211ENST00000546073 GPR25O00155 361 aa20.65■□□□□ 0.9
CD9-211ENST00000546073 FKTNO75072 461 aa20.65■□□□□ 0.9
CD9-211ENST00000546073 REC8O95072 547 aa20.65■□□□□ 0.9
CD9-211ENST00000546073 EEF2P13639 858 aaKnown RBP20.65■□□□□ 0.9
CD9-211ENST00000546073 JAG1P78504 1218 aa20.65■□□□□ 0.9
CD9-211ENST00000546073 USP17L24Q0WX57 530 aa20.65■□□□□ 0.9
CD9-211ENST00000546073 FAM47AQ5JRC9 791 aa20.65■□□□□ 0.9
CD9-211ENST00000546073 CCAR1Q8IX12 1150 aaKnown RBP20.65■□□□□ 0.9
CD9-211ENST00000546073 GTF3C2Q8WUA4 911 aaPredicted RBP20.65■□□□□ 0.9
CD9-211ENST00000546073 NYAP2Q9P242 653 aa20.65■□□□□ 0.9
CD9-211ENST00000546073 CLIP2Q9UDT6 1046 aa20.65■□□□□ 0.9
CD9-211ENST00000546073 ISY1Q9ULR0 285 aaKnown RBP20.65■□□□□ 0.9
CD9-211ENST00000546073 STX8Q9UNK0 236 aa20.65■□□□□ 0.9
CD9-211ENST00000546073 TMX2Q9Y320 296 aa20.65■□□□□ 0.9
CD9-211ENST00000546073 CEP350Q5VT06 3117 aa20.64■□□□□ 0.89
CD9-211ENST00000546073 FOXP2O15409 715 aa20.64■□□□□ 0.89
CD9-211ENST00000546073 TLR2O60603 784 aa20.64■□□□□ 0.89
CD9-211ENST00000546073 GCLCP48506 637 aaPredicted RBP20.64■□□□□ 0.89
CD9-211ENST00000546073 NOM1Q5C9Z4 860 aaKnown RBP20.64■□□□□ 0.89
CD9-211ENST00000546073 ERO1AQ96HE7 468 aa20.64■□□□□ 0.89
CD9-211ENST00000546073 SYNPO2Q9UMS6 1093 aa20.64■□□□□ 0.89
CD9-211ENST00000546073 ERICH2A1L162 156 aa20.63■□□□□ 0.89
CD9-211ENST00000546073 SP3Q02447 781 aa20.63■□□□□ 0.89
CD9-211ENST00000546073 SHROOM1Q2M3G4 852 aaPredicted RBP20.63■□□□□ 0.89
CD9-211ENST00000546073 ACER1Q8TDN7 264 aa20.63■□□□□ 0.89
CD9-211ENST00000546073 C12orf42Q96LP6 360 aa20.63■□□□□ 0.89
CD9-211ENST00000546073 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.63■□□□□ 0.89
CD9-211ENST00000546073 CTDP1Q9Y5B0 961 aaPredicted RBP20.63■□□□□ 0.89
CD9-211ENST00000546073 SMIM22K7EJ46 135 aa20.62■□□□□ 0.89
CD9-211ENST00000546073 ZKSCAN1P17029 563 aaPredicted RBP20.62■□□□□ 0.89
CD9-211ENST00000546073 GUCY1A2P33402 732 aa20.62■□□□□ 0.89
CD9-211ENST00000546073 SART3Q15020 963 aaKnown RBP20.62■□□□□ 0.89
CD9-211ENST00000546073 GPAT2Q6NUI2 795 aa20.62■□□□□ 0.89
CD9-211ENST00000546073 MAP4K1Q92918 833 aa20.62■□□□□ 0.89
CD9-211ENST00000546073 UBAC1Q9BSL1 405 aa20.62■□□□□ 0.89
CD9-211ENST00000546073 TANGO6Q9C0B7 1094 aa20.62■□□□□ 0.89
CD9-211ENST00000546073 VCPKMTQ9H867 229 aa20.62■□□□□ 0.89
CD9-211ENST00000546073 CWC22Q9HCG8 908 aaKnown RBP20.62■□□□□ 0.89
CD9-211ENST00000546073 MTMR4Q9NYA4 1195 aa20.62■□□□□ 0.89
CD9-211ENST00000546073 HOXC10Q9NYD6 342 aa20.62■□□□□ 0.89
CD9-211ENST00000546073 RBM8AQ9Y5S9 174 aaKnown RBP20.62■□□□□ 0.89
CD9-211ENST00000546073 BAZ2AQ9UIF9 1905 aaKnown RBP20.62■□□□□ 0.89
CD9-211ENST00000546073 DDX60LQ5H9U9 1706 aaKnown RBP20.61■□□□□ 0.89
CD9-211ENST00000546073 FGRP09769 529 aa20.61■□□□□ 0.89
CD9-211ENST00000546073 HOXA7P31268 230 aaPredicted RBP20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms