RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 MYL6BP14649 208 aa7.42□□□□□ -1.22
SNHG1-225ENST00000545920 GTF2E1P29083 439 aaPredicted RBP7.42□□□□□ -1.22
SNHG1-225ENST00000545920 LIFRP42702 1097 aa7.42□□□□□ -1.22
SNHG1-225ENST00000545920 SYKP43405 635 aa7.42□□□□□ -1.22
SNHG1-225ENST00000545920 NT5C2P49902 561 aa7.42□□□□□ -1.22
SNHG1-225ENST00000545920 NDUFA8P51970 172 aa7.42□□□□□ -1.22
SNHG1-225ENST00000545920 MCCD1P59942 119 aaPredicted RBP7.42□□□□□ -1.22
SNHG1-225ENST00000545920 FANCCQ00597 558 aa7.42□□□□□ -1.22
SNHG1-225ENST00000545920 TRIM29Q14134 588 aa7.42□□□□□ -1.22
SNHG1-225ENST00000545920 UBE3CQ15386 1083 aa7.42□□□□□ -1.22
SNHG1-225ENST00000545920 TERF2Q15554 542 aa7.42□□□□□ -1.22
SNHG1-225ENST00000545920 TTC39AQ5SRH9 613 aa7.42□□□□□ -1.22
SNHG1-225ENST00000545920 AXDND1Q5T1B0 1012 aaPredicted RBP7.42□□□□□ -1.22
SNHG1-225ENST00000545920 RESP18Q5W5W9 173 aa7.42□□□□□ -1.22
SNHG1-225ENST00000545920 E4F1Q66K89 784 aaPredicted RBP7.42□□□□□ -1.22
SNHG1-225ENST00000545920 CCDC102BQ68D86 513 aa7.42□□□□□ -1.22
SNHG1-225ENST00000545920 USP17L2Q6R6M4 530 aa7.42□□□□□ -1.22
SNHG1-225ENST00000545920 TREML4Q6UXN2 200 aa7.42□□□□□ -1.22
SNHG1-225ENST00000545920 USP17L1Q7RTZ2 530 aa7.42□□□□□ -1.22
SNHG1-225ENST00000545920 NBPF11Q86T75 865 aa7.42□□□□□ -1.22
SNHG1-225ENST00000545920 SGMS1Q86VZ5 419 aa7.42□□□□□ -1.22
SNHG1-225ENST00000545920 SCUBE3Q8IX30 993 aa7.42□□□□□ -1.22
SNHG1-225ENST00000545920 TMTC2Q8N394 836 aa7.42□□□□□ -1.22
SNHG1-225ENST00000545920 MLKLQ8NB16 471 aa7.42□□□□□ -1.22
SNHG1-225ENST00000545920 DDX54Q8TDD1 881 aaKnown RBP7.42□□□□□ -1.22
SNHG1-225ENST00000545920 PPP1R13BQ96KQ4 1090 aa7.42□□□□□ -1.22
SNHG1-225ENST00000545920 PYM1Q9BRP8 204 aaKnown RBP7.42□□□□□ -1.22
SNHG1-225ENST00000545920 NAA15Q9BXJ9 866 aaKnown RBP7.42□□□□□ -1.22
SNHG1-225ENST00000545920 CNNM2Q9H8M5 875 aa7.42□□□□□ -1.22
SNHG1-225ENST00000545920 NLRP2Q9NX02 1062 aa7.42□□□□□ -1.22
SNHG1-225ENST00000545920 ANGEL1Q9UNK9 670 aaKnown RBP7.42□□□□□ -1.22
SNHG1-225ENST00000545920 CEP131Q9UPN4 1083 aa7.42□□□□□ -1.22
SNHG1-225ENST00000545920 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.42□□□□□ -1.22
SNHG1-225ENST00000545920 USP16Q9Y5T5 823 aa7.42□□□□□ -1.22
SNHG1-225ENST00000545920 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.42□□□□□ -1.22
SNHG1-225ENST00000545920 WDR17Q8IZU2 1322 aa7.42□□□□□ -1.22
SNHG1-225ENST00000545920 CDHR2Q9BYE9 1310 aa7.42□□□□□ -1.22
SNHG1-225ENST00000545920 PCDH11XQ9BZA7 1347 aa7.42□□□□□ -1.22
SNHG1-225ENST00000545920 PCDH11YQ9BZA8 1340 aa7.42□□□□□ -1.22
SNHG1-225ENST00000545920 ALS2Q96Q42 1657 aa7.41□□□□□ -1.22
SNHG1-225ENST00000545920 KLF18A0A0U1RQI7 1052 aa7.41□□□□□ -1.22
SNHG1-225ENST00000545920 CCDC196A0A1B0GTZ2 297 aa7.41□□□□□ -1.22
SNHG1-225ENST00000545920 A0A1B0GUL7 405 aa7.41□□□□□ -1.22
SNHG1-225ENST00000545920 PRAMEF22A3QJZ6 481 aa7.41□□□□□ -1.22
SNHG1-225ENST00000545920 FAM187AA6NFU0 413 aa7.41□□□□□ -1.22
SNHG1-225ENST00000545920 GOLGA8BA8MQT2 603 aa7.41□□□□□ -1.22
SNHG1-225ENST00000545920 FMNL1O95466 1100 aaPredicted RBP7.41□□□□□ -1.22
SNHG1-225ENST00000545920 S1PR4O95977 384 aa7.41□□□□□ -1.22
SNHG1-225ENST00000545920 PCCAP05165 728 aaPredicted RBP7.41□□□□□ -1.22
SNHG1-225ENST00000545920 SLFN14P0C7P3 912 aa7.41□□□□□ -1.22
SNHG1-225ENST00000545920 UQCRFS1P1P0C7P4 283 aa7.41□□□□□ -1.22
SNHG1-225ENST00000545920 PFKFB1P16118 471 aa7.41□□□□□ -1.22
SNHG1-225ENST00000545920 GPS2Q13227 327 aa7.41□□□□□ -1.22
SNHG1-225ENST00000545920 NCAPHQ15003 741 aa7.41□□□□□ -1.22
SNHG1-225ENST00000545920 SAFBQ15424 915 aaKnown RBP eCLIP7.41□□□□□ -1.22
SNHG1-225ENST00000545920 CCDC57Q2TAC2 916 aa7.41□□□□□ -1.22
SNHG1-225ENST00000545920 HSP90AB3PQ58FF7 597 aa7.41□□□□□ -1.22
SNHG1-225ENST00000545920 GORABQ5T7V8 394 aa7.41□□□□□ -1.22
SNHG1-225ENST00000545920 LCE2AQ5TA79 106 aaPredicted RBP7.41□□□□□ -1.22
SNHG1-225ENST00000545920 NT5DC1Q5TFE4 455 aa7.41□□□□□ -1.22
SNHG1-225ENST00000545920 TMEM164Q5U3C3 297 aa7.41□□□□□ -1.22
SNHG1-225ENST00000545920 CCDC129Q6ZRS4 1044 aa7.41□□□□□ -1.22
SNHG1-225ENST00000545920 ZNF771Q7L3S4 317 aaPredicted RBP7.41□□□□□ -1.22
SNHG1-225ENST00000545920 TMC6Q7Z403 805 aa7.41□□□□□ -1.22
SNHG1-225ENST00000545920 VSTM4Q8IW00 320 aa7.41□□□□□ -1.22
SNHG1-225ENST00000545920 PHTF2Q8N3S3 785 aa7.41□□□□□ -1.22
SNHG1-225ENST00000545920 GPR161Q8N6U8 529 aaKnown RBP7.41□□□□□ -1.22
SNHG1-225ENST00000545920 KLHDC4Q8TBB5 520 aa7.41□□□□□ -1.22
SNHG1-225ENST00000545920 UBXN4Q92575 508 aa7.41□□□□□ -1.22
SNHG1-225ENST00000545920 ZNF592Q92610 1267 aa7.41□□□□□ -1.22
SNHG1-225ENST00000545920 GPKOWQ92917 476 aaPredicted RBP eCLIP7.41□□□□□ -1.225e-31■■■□□ 17.1
SNHG1-225ENST00000545920 NEUROD6Q96NK8 337 aa7.41□□□□□ -1.22
SNHG1-225ENST00000545920 ISCA1Q9BUE6 129 aa7.41□□□□□ -1.22
SNHG1-225ENST00000545920 XPO4Q9C0E2 1151 aaKnown RBP7.41□□□□□ -1.22
SNHG1-225ENST00000545920 IFNKQ9P0W0 207 aa7.41□□□□□ -1.22
SNHG1-225ENST00000545920 NEDD4P46934 1319 aa7.41□□□□□ -1.22
SNHG1-225ENST00000545920 TNS2Q63HR2 1409 aa7.41□□□□□ -1.22
SNHG1-225ENST00000545920 C5P01031 1676 aa7.41□□□□□ -1.22
SNHG1-225ENST00000545920 MYH15Q9Y2K3 1946 aa7.4□□□□□ -1.22
SNHG1-225ENST00000545920 FAM196BA6NMK8 535 aa7.4□□□□□ -1.22
SNHG1-225ENST00000545920 USP17L5A8MUK1 530 aa7.4□□□□□ -1.22
SNHG1-225ENST00000545920 PPEF1O14829 653 aaPredicted RBP7.4□□□□□ -1.22
SNHG1-225ENST00000545920 CSF1RP07333 972 aa7.4□□□□□ -1.22
SNHG1-225ENST00000545920 TOP1P11387 765 aaKnown RBP7.4□□□□□ -1.22
SNHG1-225ENST00000545920 GNAT2P19087 354 aa7.4□□□□□ -1.22
SNHG1-225ENST00000545920 ERCC5P28715 1186 aaPredicted RBP7.4□□□□□ -1.22
SNHG1-225ENST00000545920 PIP4K2AP48426 406 aaPredicted RBP7.4□□□□□ -1.22
SNHG1-225ENST00000545920 UBASH3AP57075 661 aa7.4□□□□□ -1.22
SNHG1-225ENST00000545920 CCT2P78371 535 aaKnown RBP7.4□□□□□ -1.22
SNHG1-225ENST00000545920 DPCR1Q3MIW9 517 aa7.4□□□□□ -1.22
SNHG1-225ENST00000545920 PHLDB3Q6NSJ2 640 aa7.4□□□□□ -1.22
SNHG1-225ENST00000545920 ARMCX5Q6P1M9 558 aa7.4□□□□□ -1.22
SNHG1-225ENST00000545920 PDXDC2PQ6P474 469 aa7.4□□□□□ -1.22
SNHG1-225ENST00000545920 TMCO3Q6UWJ1 677 aa7.4□□□□□ -1.22
SNHG1-225ENST00000545920 MNS1Q8NEH6 495 aa7.4□□□□□ -1.22
SNHG1-225ENST00000545920 FAM174AQ8TBP5 190 aa7.4□□□□□ -1.22
SNHG1-225ENST00000545920 ENOX1Q8TC92 643 aaKnown RBP7.4□□□□□ -1.22
SNHG1-225ENST00000545920 STK32AQ8WU08 396 aa7.4□□□□□ -1.22
SNHG1-225ENST00000545920 OSBP2Q969R2 916 aa7.4□□□□□ -1.22
SNHG1-225ENST00000545920 CCDC51Q96ER9 411 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms