RNA–Protein interactions for RNA: ENST00000544983.1

SNHG1-221, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-221ENST00000544983 FAM155AB1AL88 458 aaPredicted RBP13.87□□□□□ -0.19
SNHG1-221ENST00000544983 E7EWF7 191 aa13.87□□□□□ -0.19
SNHG1-221ENST00000544983 HMGB1P09429 215 aaKnown RBP13.87□□□□□ -0.19
SNHG1-221ENST00000544983 USP14P54578 494 aa13.87□□□□□ -0.19
SNHG1-221ENST00000544983 ANAPC15P60006 121 aa13.87□□□□□ -0.19
SNHG1-221ENST00000544983 ICA1Q05084 483 aa13.87□□□□□ -0.19
SNHG1-221ENST00000544983 SREBF2Q12772 1141 aa13.87□□□□□ -0.19
SNHG1-221ENST00000544983 RRP12Q5JTH9 1297 aaKnown RBP13.87□□□□□ -0.19
SNHG1-221ENST00000544983 STK11IPQ8N1F8 1099 aa13.87□□□□□ -0.19
SNHG1-221ENST00000544983 TTC14Q96N46 770 aa13.87□□□□□ -0.19
SNHG1-221ENST00000544983 UPF2Q9HAU5 1272 aaKnown RBP13.87□□□□□ -0.19
SNHG1-221ENST00000544983 NYAP2Q9P242 653 aa13.87□□□□□ -0.19
SNHG1-221ENST00000544983 ATAD5Q96QE3 1844 aa13.87□□□□□ -0.19
SNHG1-221ENST00000544983 WDR33Q9C0J8 1336 aaKnown RBP13.87□□□□□ -0.19
SNHG1-221ENST00000544983 IGKV6D-41A0A0C4DH26 115 aa13.86□□□□□ -0.19
SNHG1-221ENST00000544983 USP17L10C9JJH3 530 aa13.86□□□□□ -0.19
SNHG1-221ENST00000544983 IRF6O14896 467 aa13.86□□□□□ -0.19
SNHG1-221ENST00000544983 TTLL1O95922 423 aa13.86□□□□□ -0.19
SNHG1-221ENST00000544983 CETPP11597 493 aa13.86□□□□□ -0.19
SNHG1-221ENST00000544983 PSMA5P28066 241 aa13.86□□□□□ -0.19
SNHG1-221ENST00000544983 GUCY1A2P33402 732 aa13.86□□□□□ -0.19
SNHG1-221ENST00000544983 BACE1P56817 501 aa13.86□□□□□ -0.19
SNHG1-221ENST00000544983 SEPT2Q15019 361 aa13.86□□□□□ -0.19
SNHG1-221ENST00000544983 SART3Q15020 963 aaKnown RBP13.86□□□□□ -0.19
SNHG1-221ENST00000544983 CYP4F22Q6NT55 531 aa13.86□□□□□ -0.19
SNHG1-221ENST00000544983 FASTKD5Q7L8L6 764 aaKnown RBP13.86□□□□□ -0.19
SNHG1-221ENST00000544983 KIAA1683Q9H0B3 1180 aa13.86□□□□□ -0.19
SNHG1-221ENST00000544983 MTMR4Q9NYA4 1195 aa13.86□□□□□ -0.19
SNHG1-221ENST00000544983 PCNTO95613 3336 aa13.85□□□□□ -0.19
SNHG1-221ENST00000544983 TESPA1A2RU30 521 aaPredicted RBP13.85□□□□□ -0.19
SNHG1-221ENST00000544983 KDM4AO75164 1064 aa13.85□□□□□ -0.19
SNHG1-221ENST00000544983 JAG1P78504 1218 aa13.85□□□□□ -0.19
SNHG1-221ENST00000544983 SPP2Q13103 211 aa13.85□□□□□ -0.19
SNHG1-221ENST00000544983 SH3D19Q5HYK7 790 aa13.85□□□□□ -0.19
SNHG1-221ENST00000544983 OTUD7BQ6GQQ9 843 aa13.85□□□□□ -0.19
SNHG1-221ENST00000544983 DGKHQ86XP1 1220 aa13.85□□□□□ -0.19
SNHG1-221ENST00000544983 PROCA1Q8NCQ7 364 aaPredicted RBP13.85□□□□□ -0.19
SNHG1-221ENST00000544983 MKL1Q969V6 931 aa13.85□□□□□ -0.19
SNHG1-221ENST00000544983 UBAC1Q9BSL1 405 aa13.85□□□□□ -0.19
SNHG1-221ENST00000544983 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.85□□□□□ -0.19
SNHG1-221ENST00000544983 ZCCHC17Q9NP64 241 aaKnown RBP13.85□□□□□ -0.19
SNHG1-221ENST00000544983 ZSWIM5Q9P217 1185 aa13.85□□□□□ -0.19
SNHG1-221ENST00000544983 TMX2Q9Y320 296 aa13.85□□□□□ -0.19
SNHG1-221ENST00000544983 GREB1LQ9C091 1923 aaPredicted RBP13.85□□□□□ -0.19
SNHG1-221ENST00000544983 NEDD4P46934 1319 aa13.85□□□□□ -0.19
SNHG1-221ENST00000544983 A0A0G2JLL6 359 aaPredicted RBP13.84□□□□□ -0.19
SNHG1-221ENST00000544983 B4E1Z4 1266 aa13.84□□□□□ -0.19
SNHG1-221ENST00000544983 MCM5P33992 734 aa13.84□□□□□ -0.19
SNHG1-221ENST00000544983 GJA5P36382 358 aa13.84□□□□□ -0.19
SNHG1-221ENST00000544983 NOVP48745 357 aa13.84□□□□□ -0.19
SNHG1-221ENST00000544983 VEGFBP49765 207 aa13.84□□□□□ -0.19
SNHG1-221ENST00000544983 FAM47AQ5JRC9 791 aa13.84□□□□□ -0.19
SNHG1-221ENST00000544983 USP17L2Q6R6M4 530 aa13.84□□□□□ -0.19
SNHG1-221ENST00000544983 PRRT2Q7Z6L0 340 aaPredicted RBP13.84□□□□□ -0.19
SNHG1-221ENST00000544983 TMTC2Q8N394 836 aa13.84□□□□□ -0.19
SNHG1-221ENST00000544983 IL27Q8NEV9 243 aa13.84□□□□□ -0.19
SNHG1-221ENST00000544983 LPAR1Q92633 364 aa13.84□□□□□ -0.19
SNHG1-221ENST00000544983 CEP95Q96GE4 821 aa13.84□□□□□ -0.19
SNHG1-221ENST00000544983 FEZ1Q99689 392 aa13.84□□□□□ -0.19
SNHG1-221ENST00000544983 INCENPQ9NQS7 918 aa13.84□□□□□ -0.19
SNHG1-221ENST00000544983 TACC3Q9Y6A5 838 aa13.84□□□□□ -0.19
SNHG1-221ENST00000544983 WDR19Q8NEZ3 1342 aa13.84□□□□□ -0.19
SNHG1-221ENST00000544983 ERICH2A1L162 156 aa13.83□□□□□ -0.2
SNHG1-221ENST00000544983 TRIM75PA6NK02 468 aa13.83□□□□□ -0.2
SNHG1-221ENST00000544983 ALDH1A1P00352 501 aa13.83□□□□□ -0.2
SNHG1-221ENST00000544983 HSPA1AP0DMV8 641 aaKnown RBP13.83□□□□□ -0.2
SNHG1-221ENST00000544983 HSPA1BP0DMV9 641 aaKnown RBP13.83□□□□□ -0.2
SNHG1-221ENST00000544983 EEF2P13639 858 aaKnown RBP13.83□□□□□ -0.2
SNHG1-221ENST00000544983 TM4SF4P48230 202 aa13.83□□□□□ -0.2
SNHG1-221ENST00000544983 PABPC4Q13310 644 aaKnown RBP eCLIP13.83□□□□□ -0.2
SNHG1-221ENST00000544983 MB21D2Q8IYB1 491 aaPredicted RBP13.83□□□□□ -0.2
SNHG1-221ENST00000544983 CNKSR2Q8WXI2 1034 aa13.83□□□□□ -0.2
SNHG1-221ENST00000544983 ANKS1AQ92625 1134 aa13.83□□□□□ -0.2
SNHG1-221ENST00000544983 IL17RAQ96F46 866 aa13.83□□□□□ -0.2
SNHG1-221ENST00000544983 MS4A4AQ96JQ5 239 aa13.83□□□□□ -0.2
SNHG1-221ENST00000544983 TMEM87BQ96K49 555 aa13.83□□□□□ -0.2
SNHG1-221ENST00000544983 C12orf42Q96LP6 360 aa13.83□□□□□ -0.2
SNHG1-221ENST00000544983 NEK1Q96PY6 1258 aa13.83□□□□□ -0.2
SNHG1-221ENST00000544983 ZSCAN10Q96SZ4 725 aaPredicted RBP13.83□□□□□ -0.2
SNHG1-221ENST00000544983 TM6SF1Q9BZW5 370 aa13.83□□□□□ -0.2
SNHG1-221ENST00000544983 GOPCQ9HD26 462 aa13.83□□□□□ -0.2
SNHG1-221ENST00000544983 IL17RBQ9NRM6 502 aa13.83□□□□□ -0.2
SNHG1-221ENST00000544983 TMOD4Q9NZQ9 345 aa13.83□□□□□ -0.2
SNHG1-221ENST00000544983 SLC45A1Q9Y2W3 748 aa13.83□□□□□ -0.2
SNHG1-221ENST00000544983 SNX14Q9Y5W7 946 aa13.83□□□□□ -0.2
SNHG1-221ENST00000544983 PHIPQ8WWQ0 1821 aa13.83□□□□□ -0.2
SNHG1-221ENST00000544983 CCL15-CCL14A0A0B4J2E2 113 aa13.82□□□□□ -0.2
SNHG1-221ENST00000544983 TOP1P11387 765 aaKnown RBP13.82□□□□□ -0.2
SNHG1-221ENST00000544983 KIF23Q02241 960 aaPredicted RBP13.82□□□□□ -0.2
SNHG1-221ENST00000544983 MAP2K1Q02750 393 aaPredicted RBP13.82□□□□□ -0.2
SNHG1-221ENST00000544983 MTMR2Q13614 643 aa13.82□□□□□ -0.2
SNHG1-221ENST00000544983 CCL15Q16663 113 aa13.82□□□□□ -0.2
SNHG1-221ENST00000544983 SHROOM1Q2M3G4 852 aaPredicted RBP13.82□□□□□ -0.2
SNHG1-221ENST00000544983 STOX1Q6ZVD7 989 aa13.82□□□□□ -0.2
SNHG1-221ENST00000544983 DHX32Q7L7V1 743 aaKnown RBP13.82□□□□□ -0.2
SNHG1-221ENST00000544983 SIAH1Q8IUQ4 282 aa13.82□□□□□ -0.2
SNHG1-221ENST00000544983 RASEFQ8IZ41 740 aa13.82□□□□□ -0.2
SNHG1-221ENST00000544983 GMCL1P1Q8NEA9 526 aa13.82□□□□□ -0.2
SNHG1-221ENST00000544983 BACH2Q9BYV9 841 aa13.82□□□□□ -0.2
SNHG1-221ENST00000544983 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms