RNA–Protein interactions for RNA: ENST00000543590.1

VPS37B-204, Transcript of VPS37B, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37B, Length 1,457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-204ENST00000543590 TNPO2O14787 897 aaKnown RBP17.16■□□□□ 0.34
VPS37B-204ENST00000543590 LRRFIP1Q32MZ4 808 aaKnown RBP17.16■□□□□ 0.34
VPS37B-204ENST00000543590 EXOC6Q8TAG9 804 aa17.16■□□□□ 0.34
VPS37B-204ENST00000543590 HTTP42858 3142 aa17.15■□□□□ 0.34
VPS37B-204ENST00000543590 GSG1L2A8MUP6 293 aa17.15■□□□□ 0.34
VPS37B-204ENST00000543590 CDK8P49336 464 aa17.15■□□□□ 0.34
VPS37B-204ENST00000543590 USP14P54578 494 aa17.15■□□□□ 0.34
VPS37B-204ENST00000543590 HERVK_113P62684 666 aa17.15■□□□□ 0.34
VPS37B-204ENST00000543590 MORF4L1Q9UBU8 362 aa17.15■□□□□ 0.34
VPS37B-204ENST00000543590 SUPT16HQ9Y5B9 1047 aaKnown RBP17.15■□□□□ 0.34
VPS37B-204ENST00000543590 GPAA1O43292 621 aa17.14■□□□□ 0.33
VPS37B-204ENST00000543590 MYCP01106 439 aaPredicted RBP17.14■□□□□ 0.33
VPS37B-204ENST00000543590 GRK4P32298 578 aa17.14■□□□□ 0.33
VPS37B-204ENST00000543590 TMEM179Q6ZVK1 233 aa17.14■□□□□ 0.33
VPS37B-204ENST00000543590 C16orf86Q6ZW13 317 aa17.14■□□□□ 0.33
VPS37B-204ENST00000543590 FSD1Q9BTV5 496 aa17.14■□□□□ 0.33
VPS37B-204ENST00000543590 TMEM106CQ9BVX2 250 aa17.14■□□□□ 0.33
VPS37B-204ENST00000543590 RWDD1Q9H446 243 aaPredicted RBP17.14■□□□□ 0.33
VPS37B-204ENST00000543590 STAP2Q9UGK3 403 aa17.14■□□□□ 0.33
VPS37B-204ENST00000543590 KIAA0100Q14667 2235 aaKnown RBP17.14■□□□□ 0.33
VPS37B-204ENST00000543590 M0R2C6 588 aa17.13■□□□□ 0.33
VPS37B-204ENST00000543590 AKR1B1P15121 316 aa17.13■□□□□ 0.33
VPS37B-204ENST00000543590 FLT3LGP49771 235 aa17.13■□□□□ 0.33
VPS37B-204ENST00000543590 PDE1AP54750 535 aa17.13■□□□□ 0.33
VPS37B-204ENST00000543590 SBK1Q52WX2 424 aa17.13■□□□□ 0.33
VPS37B-204ENST00000543590 GIMAP6Q6P9H5 292 aa17.13■□□□□ 0.33
VPS37B-204ENST00000543590 SMC5Q8IY18 1101 aa17.13■□□□□ 0.33
VPS37B-204ENST00000543590 COA7Q96BR5 231 aa17.13■□□□□ 0.33
VPS37B-204ENST00000543590 CCDC17Q96LX7 622 aa17.13■□□□□ 0.33
VPS37B-204ENST00000543590 ARPP21Q9UBL0 812 aaPredicted RBP17.13■□□□□ 0.33
VPS37B-204ENST00000543590 A0A1W2PRG0 241 aa17.12■□□□□ 0.33
VPS37B-204ENST00000543590 USP17L15C9J2P7 530 aa17.12■□□□□ 0.33
VPS37B-204ENST00000543590 USP17L13C9JLJ4 530 aa17.12■□□□□ 0.33
VPS37B-204ENST00000543590 USP17L11C9JVI0 530 aa17.12■□□□□ 0.33
VPS37B-204ENST00000543590 USP17L18D6R9N7 530 aa17.12■□□□□ 0.33
VPS37B-204ENST00000543590 USP17L22D6RA61 530 aa17.12■□□□□ 0.33
VPS37B-204ENST00000543590 USP17L17D6RBQ6 530 aa17.12■□□□□ 0.33
VPS37B-204ENST00000543590 USP17L19D6RCP7 530 aa17.12■□□□□ 0.33
VPS37B-204ENST00000543590 USP17L20D6RJB6 530 aa17.12■□□□□ 0.33
VPS37B-204ENST00000543590 PEX10O60683 326 aa17.12■□□□□ 0.33
VPS37B-204ENST00000543590 GNAT2P19087 354 aa17.12■□□□□ 0.33
VPS37B-204ENST00000543590 VCAM1P19320 739 aa17.12■□□□□ 0.33
VPS37B-204ENST00000543590 EN2P19622 333 aaPredicted RBP17.12■□□□□ 0.33
VPS37B-204ENST00000543590 USP17L24Q0WX57 530 aa17.12■□□□□ 0.33
VPS37B-204ENST00000543590 TXNRD2Q9NNW7 524 aa17.12■□□□□ 0.33
VPS37B-204ENST00000543590 RBPJLQ9UBG7 517 aa17.12■□□□□ 0.33
VPS37B-204ENST00000543590 RBBP6Q7Z6E9 1792 aaKnown RBP17.12■□□□□ 0.33
VPS37B-204ENST00000543590 ADCY3O60266 1144 aa17.12■□□□□ 0.33
VPS37B-204ENST00000543590 IGHDP01880 384 aa17.12■□□□□ 0.33
VPS37B-204ENST00000543590 IRF5Q13568 498 aa17.12■□□□□ 0.33
VPS37B-204ENST00000543590 ZMYM1Q5SVZ6 1142 aa17.12■□□□□ 0.33
VPS37B-204ENST00000543590 POTEEQ6S8J3 1075 aa17.12■□□□□ 0.33
VPS37B-204ENST00000543590 CATSPERGQ6ZRH7 1159 aa17.12■□□□□ 0.33
VPS37B-204ENST00000543590 SLAIN1Q8ND83 568 aa17.12■□□□□ 0.33
VPS37B-204ENST00000543590 GPRC5AQ8NFJ5 357 aa17.12■□□□□ 0.33
VPS37B-204ENST00000543590 GTF3C2Q8WUA4 911 aaPredicted RBP17.12■□□□□ 0.33
VPS37B-204ENST00000543590 SEC62Q99442 399 aaKnown RBP17.12■□□□□ 0.33
VPS37B-204ENST00000543590 LNPKQ9C0E8 428 aa17.12■□□□□ 0.33
VPS37B-204ENST00000543590 EPB41L4AQ9HCS5 686 aaPredicted RBP17.12■□□□□ 0.33
VPS37B-204ENST00000543590 MYH8P13535 1937 aa17.11■□□□□ 0.33
VPS37B-204ENST00000543590 APPP05067 770 aa17.11■□□□□ 0.33
VPS37B-204ENST00000543590 MTFR1Q15390 333 aa17.11■□□□□ 0.33
VPS37B-204ENST00000543590 CLEC10AQ8IUN9 316 aa17.11■□□□□ 0.33
VPS37B-204ENST00000543590 SIAH1Q8IUQ4 282 aa17.11■□□□□ 0.33
VPS37B-204ENST00000543590 RPAP3Q9H6T3 665 aaPredicted RBP17.11■□□□□ 0.33
VPS37B-204ENST00000543590 BIN2Q9UBW5 565 aaPredicted RBP17.11■□□□□ 0.33
VPS37B-204ENST00000543590 DOCK3Q8IZD9 2030 aa17.11■□□□□ 0.33
VPS37B-204ENST00000543590 MINDY4BA8MYZ0 360 aa17.1■□□□□ 0.33
VPS37B-204ENST00000543590 PATL2C9JE40 543 aaKnown RBP17.1■□□□□ 0.33
VPS37B-204ENST00000543590 ELNP15502 786 aa17.1■□□□□ 0.33
VPS37B-204ENST00000543590 ICA1Q05084 483 aa17.1■□□□□ 0.33
VPS37B-204ENST00000543590 Q3C1V9 767 aa17.1■□□□□ 0.33
VPS37B-204ENST00000543590 B4GALNT3Q6L9W6 998 aa17.1■□□□□ 0.33
VPS37B-204ENST00000543590 PXYLP1Q8TE99 480 aa17.1■□□□□ 0.33
VPS37B-204ENST00000543590 EVI5LQ96CN4 794 aa17.1■□□□□ 0.33
VPS37B-204ENST00000543590 PAGR1Q9BTK6 254 aa17.1■□□□□ 0.33
VPS37B-204ENST00000543590 TDO2P48775 406 aa17.09■□□□□ 0.33
VPS37B-204ENST00000543590 ERVK-9P63128 1117 aa17.09■□□□□ 0.33
VPS37B-204ENST00000543590 ERVK-24P63145 666 aa17.09■□□□□ 0.33
VPS37B-204ENST00000543590 IFNL3Q8IZI9 196 aa17.09■□□□□ 0.33
VPS37B-204ENST00000543590 STK11IPQ8N1F8 1099 aa17.09■□□□□ 0.33
VPS37B-204ENST00000543590 ARHGEF10LQ9HCE6 1279 aa17.09■□□□□ 0.33
VPS37B-204ENST00000543590 GJD2Q9UKL4 321 aa17.09■□□□□ 0.33
VPS37B-204ENST00000543590 RABGAP1Q9Y3P9 1069 aa17.09■□□□□ 0.33
VPS37B-204ENST00000543590 CCL5P13501 91 aa17.08■□□□□ 0.32
VPS37B-204ENST00000543590 UBXN2AP68543 259 aa17.08■□□□□ 0.32
VPS37B-204ENST00000543590 KIAA1755Q5JYT7 1200 aa17.08■□□□□ 0.32
VPS37B-204ENST00000543590 KANSL2Q9H9L4 492 aa17.08■□□□□ 0.32
VPS37B-204ENST00000543590 TMX2Q9Y320 296 aa17.08■□□□□ 0.32
VPS37B-204ENST00000543590 ROBO3Q96MS0 1386 aa17.07■□□□□ 0.32
VPS37B-204ENST00000543590 CNMDO75829 334 aa17.07■□□□□ 0.32
VPS37B-204ENST00000543590 EEF2P13639 858 aaKnown RBP17.07■□□□□ 0.32
VPS37B-204ENST00000543590 RASA1P20936 1047 aa17.07■□□□□ 0.32
VPS37B-204ENST00000543590 MAPK4P31152 587 aa17.07■□□□□ 0.32
VPS37B-204ENST00000543590 NUCB1Q02818 461 aa17.07■□□□□ 0.32
VPS37B-204ENST00000543590 LBX2Q6XYB7 198 aa17.07■□□□□ 0.32
VPS37B-204ENST00000543590 CHD1LQ86WJ1 897 aa17.07■□□□□ 0.32
VPS37B-204ENST00000543590 LPAR1Q92633 364 aa17.07■□□□□ 0.32
VPS37B-204ENST00000543590 NACAP1Q9BZK3 213 aa17.07■□□□□ 0.32
VPS37B-204ENST00000543590 PORCNQ9H237 461 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms