RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 USP17L21D6R901 530 aa15.79■□□□□ 0.12
TNFRSF1A-215ENST00000543359 RNF113AO15541 343 aaKnown RBP15.79■□□□□ 0.12
TNFRSF1A-215ENST00000543359 MYCP01106 439 aaPredicted RBP15.79■□□□□ 0.12
TNFRSF1A-215ENST00000543359 HDAC1Q13547 482 aaPredicted RBP15.79■□□□□ 0.12
TNFRSF1A-215ENST00000543359 IRF5Q13568 498 aa15.79■□□□□ 0.12
TNFRSF1A-215ENST00000543359 CTR9Q6PD62 1173 aa15.79■□□□□ 0.12
TNFRSF1A-215ENST00000543359 GPATCH3Q96I76 525 aa15.79■□□□□ 0.12
TNFRSF1A-215ENST00000543359 TMEM106CQ9BVX2 250 aa15.79■□□□□ 0.12
TNFRSF1A-215ENST00000543359 CABP5Q9NP86 173 aa15.79■□□□□ 0.12
TNFRSF1A-215ENST00000543359 SWAP70Q9UH65 585 aa15.79■□□□□ 0.12
TNFRSF1A-215ENST00000543359 SLC4A4Q9Y6R1 1079 aa15.79■□□□□ 0.12
TNFRSF1A-215ENST00000543359 PLXNB2O15031 1838 aa15.79■□□□□ 0.12
TNFRSF1A-215ENST00000543359 GSG1L2A8MUP6 293 aa15.78■□□□□ 0.12
TNFRSF1A-215ENST00000543359 TNPO2O14787 897 aaKnown RBP15.78■□□□□ 0.12
TNFRSF1A-215ENST00000543359 AKR1B1P15121 316 aa15.78■□□□□ 0.12
TNFRSF1A-215ENST00000543359 IRX3P78415 501 aaPredicted RBP15.78■□□□□ 0.12
TNFRSF1A-215ENST00000543359 Q3C1V9 767 aa15.78■□□□□ 0.12
TNFRSF1A-215ENST00000543359 CATSPERGQ6ZRH7 1159 aa15.78■□□□□ 0.12
TNFRSF1A-215ENST00000543359 SLAIN1Q8ND83 568 aa15.78■□□□□ 0.12
TNFRSF1A-215ENST00000543359 PXYLP1Q8TE99 480 aa15.78■□□□□ 0.12
TNFRSF1A-215ENST00000543359 ADCY3O60266 1144 aa15.77■□□□□ 0.12
TNFRSF1A-215ENST00000543359 CNMDO75829 334 aa15.77■□□□□ 0.12
TNFRSF1A-215ENST00000543359 VCAM1P19320 739 aa15.77■□□□□ 0.12
TNFRSF1A-215ENST00000543359 CDK8P49336 464 aa15.77■□□□□ 0.12
TNFRSF1A-215ENST00000543359 USP14P54578 494 aa15.77■□□□□ 0.12
TNFRSF1A-215ENST00000543359 KIAA1755Q5JYT7 1200 aa15.77■□□□□ 0.12
TNFRSF1A-215ENST00000543359 C16orf86Q6ZW13 317 aa15.77■□□□□ 0.12
TNFRSF1A-215ENST00000543359 APPBP2Q92624 585 aa15.77■□□□□ 0.12
TNFRSF1A-215ENST00000543359 COA7Q96BR5 231 aa15.77■□□□□ 0.12
TNFRSF1A-215ENST00000543359 SHISA4Q96DD7 197 aa15.77■□□□□ 0.12
TNFRSF1A-215ENST00000543359 MYH8P13535 1937 aa15.76■□□□□ 0.11
TNFRSF1A-215ENST00000543359 RANBP2P49792 3224 aaKnown RBP15.76■□□□□ 0.11
TNFRSF1A-215ENST00000543359 USP17L15C9J2P7 530 aa15.76■□□□□ 0.11
TNFRSF1A-215ENST00000543359 USP17L13C9JLJ4 530 aa15.76■□□□□ 0.11
TNFRSF1A-215ENST00000543359 USP17L11C9JVI0 530 aa15.76■□□□□ 0.11
TNFRSF1A-215ENST00000543359 USP17L18D6R9N7 530 aa15.76■□□□□ 0.11
TNFRSF1A-215ENST00000543359 USP17L22D6RA61 530 aa15.76■□□□□ 0.11
TNFRSF1A-215ENST00000543359 USP17L17D6RBQ6 530 aa15.76■□□□□ 0.11
TNFRSF1A-215ENST00000543359 USP17L19D6RCP7 530 aa15.76■□□□□ 0.11
TNFRSF1A-215ENST00000543359 USP17L20D6RJB6 530 aa15.76■□□□□ 0.11
TNFRSF1A-215ENST00000543359 M0R2C6 588 aa15.76■□□□□ 0.11
TNFRSF1A-215ENST00000543359 GLRX3O76003 335 aaKnown RBP15.76■□□□□ 0.11
TNFRSF1A-215ENST00000543359 CCL5P13501 91 aa15.76■□□□□ 0.11
TNFRSF1A-215ENST00000543359 ELNP15502 786 aa15.76■□□□□ 0.11
TNFRSF1A-215ENST00000543359 MX1P20591 662 aa15.76■□□□□ 0.11
TNFRSF1A-215ENST00000543359 USP17L24Q0WX57 530 aa15.76■□□□□ 0.11
TNFRSF1A-215ENST00000543359 ZYXQ15942 572 aaKnown RBP15.76■□□□□ 0.11
TNFRSF1A-215ENST00000543359 SBK1Q52WX2 424 aa15.76■□□□□ 0.11
TNFRSF1A-215ENST00000543359 GIMAP6Q6P9H5 292 aa15.76■□□□□ 0.11
TNFRSF1A-215ENST00000543359 TMEM179Q6ZVK1 233 aa15.76■□□□□ 0.11
TNFRSF1A-215ENST00000543359 GPRC5AQ8NFJ5 357 aa15.76■□□□□ 0.11
TNFRSF1A-215ENST00000543359 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.76■□□□□ 0.11
TNFRSF1A-215ENST00000543359 STAP2Q9UGK3 403 aa15.76■□□□□ 0.11
TNFRSF1A-215ENST00000543359 RLFQ13129 1914 aa15.76■□□□□ 0.11
TNFRSF1A-215ENST00000543359 MPHOSPH10O00566 681 aaKnown RBP15.75■□□□□ 0.11
TNFRSF1A-215ENST00000543359 ZFYP08048 801 aaPredicted RBP15.75■□□□□ 0.11
TNFRSF1A-215ENST00000543359 ERVK-9P63128 1117 aa15.75■□□□□ 0.11
TNFRSF1A-215ENST00000543359 ERVK-24P63145 666 aa15.75■□□□□ 0.11
TNFRSF1A-215ENST00000543359 AAMPQ13685 434 aa15.75■□□□□ 0.11
TNFRSF1A-215ENST00000543359 ANKRD45Q5TZF3 282 aa15.75■□□□□ 0.11
TNFRSF1A-215ENST00000543359 LBX2Q6XYB7 198 aa15.75■□□□□ 0.11
TNFRSF1A-215ENST00000543359 CLEC10AQ8IUN9 316 aa15.75■□□□□ 0.11
TNFRSF1A-215ENST00000543359 USP6NLQ92738 828 aa15.75■□□□□ 0.11
TNFRSF1A-215ENST00000543359 GCC1Q96CN9 775 aa15.75■□□□□ 0.11
TNFRSF1A-215ENST00000543359 SEC62Q99442 399 aaKnown RBP15.75■□□□□ 0.11
TNFRSF1A-215ENST00000543359 FEZ1Q99689 392 aa15.75■□□□□ 0.11
TNFRSF1A-215ENST00000543359 EPB41L4AQ9HCS5 686 aaPredicted RBP15.75■□□□□ 0.11
TNFRSF1A-215ENST00000543359 ERC2O15083 957 aa15.74■□□□□ 0.11
TNFRSF1A-215ENST00000543359 GPAA1O43292 621 aa15.74■□□□□ 0.11
TNFRSF1A-215ENST00000543359 INHAP05111 366 aa15.74■□□□□ 0.11
TNFRSF1A-215ENST00000543359 GJB1P08034 283 aa15.74■□□□□ 0.11
TNFRSF1A-215ENST00000543359 UBE2Q1Q7Z7E8 422 aa15.74■□□□□ 0.11
TNFRSF1A-215ENST00000543359 GTF3C2Q8WUA4 911 aaPredicted RBP15.74■□□□□ 0.11
TNFRSF1A-215ENST00000543359 CCDC17Q96LX7 622 aa15.74■□□□□ 0.11
TNFRSF1A-215ENST00000543359 UNC93B1Q9H1C4 597 aa15.74■□□□□ 0.11
TNFRSF1A-215ENST00000543359 PORCNQ9H237 461 aa15.74■□□□□ 0.11
TNFRSF1A-215ENST00000543359 RPAP3Q9H6T3 665 aaPredicted RBP15.74■□□□□ 0.11
TNFRSF1A-215ENST00000543359 RABGAP1Q9Y3P9 1069 aa15.74■□□□□ 0.11
TNFRSF1A-215ENST00000543359 GREB1LQ9C091 1923 aaPredicted RBP15.74■□□□□ 0.11
TNFRSF1A-215ENST00000543359 SPDYE16A6NNV3 312 aaPredicted RBP15.73■□□□□ 0.11
TNFRSF1A-215ENST00000543359 GJA8P48165 433 aa15.73■□□□□ 0.11
TNFRSF1A-215ENST00000543359 UBXN2AP68543 259 aa15.73■□□□□ 0.11
TNFRSF1A-215ENST00000543359 ZMYM1Q5SVZ6 1142 aa15.73■□□□□ 0.11
TNFRSF1A-215ENST00000543359 PRPF38BQ5VTL8 546 aaKnown RBP15.73■□□□□ 0.11
TNFRSF1A-215ENST00000543359 SMC5Q8IY18 1101 aa15.73■□□□□ 0.11
TNFRSF1A-215ENST00000543359 RNF208Q9H0X6 261 aa15.73■□□□□ 0.11
TNFRSF1A-215ENST00000543359 BTBD7Q9P203 1132 aa15.73■□□□□ 0.11
TNFRSF1A-215ENST00000543359 ARPP21Q9UBL0 812 aaPredicted RBP15.73■□□□□ 0.11
TNFRSF1A-215ENST00000543359 TMX2Q9Y320 296 aa15.73■□□□□ 0.11
TNFRSF1A-215ENST00000543359 PATL2C9JE40 543 aaKnown RBP15.72■□□□□ 0.11
TNFRSF1A-215ENST00000543359 PDE1AP54750 535 aa15.72■□□□□ 0.11
TNFRSF1A-215ENST00000543359 MORN1Q5T089 497 aa15.72■□□□□ 0.11
TNFRSF1A-215ENST00000543359 EXOC6Q8TAG9 804 aa15.72■□□□□ 0.11
TNFRSF1A-215ENST00000543359 DDRGK1Q96HY6 314 aa15.72■□□□□ 0.11
TNFRSF1A-215ENST00000543359 PAGR1Q9BTK6 254 aa15.72■□□□□ 0.11
TNFRSF1A-215ENST00000543359 PAK6Q9NQU5 681 aaPredicted RBP15.72■□□□□ 0.11
TNFRSF1A-215ENST00000543359 BIN2Q9UBW5 565 aaPredicted RBP15.72■□□□□ 0.11
TNFRSF1A-215ENST00000543359 ROBO3Q96MS0 1386 aa15.72■□□□□ 0.11
TNFRSF1A-215ENST00000543359 DNAH12Q6ZR08 3092 aa15.71■□□□□ 0.11
TNFRSF1A-215ENST00000543359 FOXP2O15409 715 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms