RNA–Protein interactions for RNA: ENST00000543323.5

MDM2-230, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 427 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-230ENST00000543323 SLC6A18Q96N87 628 aa7.8□□□□□ -1.16
MDM2-230ENST00000543323 APBA2Q99767 749 aa7.8□□□□□ -1.16
MDM2-230ENST00000543323 AARSD1Q9BTE6 412 aaKnown RBP7.8□□□□□ -1.16
MDM2-230ENST00000543323 MRPL4Q9BYD3 311 aaKnown RBP7.8□□□□□ -1.16
MDM2-230ENST00000543323 PICK1Q9NRD5 415 aa7.8□□□□□ -1.16
MDM2-230ENST00000543323 SUSD2Q9UGT4 822 aa7.8□□□□□ -1.16
MDM2-230ENST00000543323 MAPRE3Q9UPY8 281 aa7.8□□□□□ -1.16
MDM2-230ENST00000543323 TRBV23-1A0A0A0MS06 115 aa7.79□□□□□ -1.16
MDM2-230ENST00000543323 ID3Q02535 119 aa7.79□□□□□ -1.16
MDM2-230ENST00000543323 SETDB1Q15047 1291 aa7.79□□□□□ -1.16
MDM2-230ENST00000543323 AKAP4Q5JQC9 854 aa7.79□□□□□ -1.16
MDM2-230ENST00000543323 HID1Q8IV36 788 aa7.79□□□□□ -1.16
MDM2-230ENST00000543323 MAP4K3Q8IVH8 894 aa7.79□□□□□ -1.16
MDM2-230ENST00000543323 SCUBE1Q8IWY4 988 aa7.79□□□□□ -1.16
MDM2-230ENST00000543323 SMARCC1Q92922 1105 aaPredicted RBP7.79□□□□□ -1.16
MDM2-230ENST00000543323 CLUHP3Q96NS8 147 aa7.79□□□□□ -1.16
MDM2-230ENST00000543323 THRAP3Q9Y2W1 955 aaKnown RBP7.79□□□□□ -1.16
MDM2-230ENST00000543323 UBOX5O94941 541 aa7.78□□□□□ -1.16
MDM2-230ENST00000543323 TP53P04637 393 aaPredicted RBP7.78□□□□□ -1.16
MDM2-230ENST00000543323 PPP2R2AP63151 447 aa7.78□□□□□ -1.16
MDM2-230ENST00000543323 YOD1Q5VVQ6 348 aaPredicted RBP7.78□□□□□ -1.16
MDM2-230ENST00000543323 TDRD10Q5VZ19 366 aaKnown RBP7.78□□□□□ -1.16
MDM2-230ENST00000543323 UBR7Q8N806 425 aa7.78□□□□□ -1.16
MDM2-230ENST00000543323 GALNT11Q8NCW6 608 aa7.78□□□□□ -1.16
MDM2-230ENST00000543323 CCDC74BQ96LY2 380 aa7.78□□□□□ -1.16
MDM2-230ENST00000543323 HAUS7Q99871 368 aa7.78□□□□□ -1.16
MDM2-230ENST00000543323 RAD18Q9NS91 495 aa7.78□□□□□ -1.16
MDM2-230ENST00000543323 INTS7Q9NVH2 962 aaKnown RBP7.78□□□□□ -1.16
MDM2-230ENST00000543323 FAM86C1Q9NVL1 165 aa7.78□□□□□ -1.16
MDM2-230ENST00000543323 LRP2BPQ9P2M1 347 aa7.78□□□□□ -1.16
MDM2-230ENST00000543323 IGF1RP08069 1367 aa7.77□□□□□ -1.17
MDM2-230ENST00000543323 DNAJC25-GNG10A0A024R161 153 aa7.77□□□□□ -1.17
MDM2-230ENST00000543323 TMPRSS2O15393 492 aa7.77□□□□□ -1.17
MDM2-230ENST00000543323 ADAM11O75078 769 aa7.77□□□□□ -1.17
MDM2-230ENST00000543323 DLGAP3O95886 979 aa7.77□□□□□ -1.17
MDM2-230ENST00000543323 EPHX1P07099 455 aa7.77□□□□□ -1.17
MDM2-230ENST00000543323 EPXP11678 715 aa7.77□□□□□ -1.17
MDM2-230ENST00000543323 HEATR6Q6AI08 1181 aaKnown RBP7.77□□□□□ -1.17
MDM2-230ENST00000543323 AFAP1L2Q8N4X5 818 aa7.77□□□□□ -1.17
MDM2-230ENST00000543323 ZNF507Q8TCN5 953 aa7.77□□□□□ -1.17
MDM2-230ENST00000543323 TARS2Q9BW92 718 aaKnown RBP7.77□□□□□ -1.17
MDM2-230ENST00000543323 MAGEC2Q9UBF1 373 aaPredicted RBP7.77□□□□□ -1.17
MDM2-230ENST00000543323 EID1Q9Y6B2 187 aa7.77□□□□□ -1.17
MDM2-230ENST00000543323 CCDC194A0A1B0GVG4 234 aa7.76□□□□□ -1.17
MDM2-230ENST00000543323 C9IYK1 514 aa7.76□□□□□ -1.17
MDM2-230ENST00000543323 M0R082 166 aa7.76□□□□□ -1.17
MDM2-230ENST00000543323 DDX3YO15523 660 aaKnown RBP7.76□□□□□ -1.17
MDM2-230ENST00000543323 CLEC3AO75596 197 aa7.76□□□□□ -1.17
MDM2-230ENST00000543323 ITGAVP06756 1048 aa7.76□□□□□ -1.17
MDM2-230ENST00000543323 FGFR1P11362 822 aa7.76□□□□□ -1.17
MDM2-230ENST00000543323 GBP1P32455 592 aa7.76□□□□□ -1.17
MDM2-230ENST00000543323 NTF4P34130 210 aa7.76□□□□□ -1.17
MDM2-230ENST00000543323 SUMO1P63165 101 aaKnown RBP7.76□□□□□ -1.17
MDM2-230ENST00000543323 WWC2Q6AWC2 1192 aa7.76□□□□□ -1.17
MDM2-230ENST00000543323 LRRTM3Q86VH5 581 aa7.76□□□□□ -1.17
MDM2-230ENST00000543323 ZNF227Q86WZ6 799 aa7.76□□□□□ -1.17
MDM2-230ENST00000543323 CERS3Q8IU89 383 aa7.76□□□□□ -1.17
MDM2-230ENST00000543323 RNF214Q8ND24 703 aa7.76□□□□□ -1.17
MDM2-230ENST00000543323 LRRN4CLQ8ND94 238 aa7.76□□□□□ -1.17
MDM2-230ENST00000543323 ZNF417Q8TAU3 575 aa7.76□□□□□ -1.17
MDM2-230ENST00000543323 ZNF587Q96SQ5 575 aaPredicted RBP7.76□□□□□ -1.17
MDM2-230ENST00000543323 KLHL25Q9H0H3 589 aa7.76□□□□□ -1.17
MDM2-230ENST00000543323 FBRSQ9HAH7 460 aa7.76□□□□□ -1.17
MDM2-230ENST00000543323 CRIM1Q9NZV1 1036 aa7.76□□□□□ -1.17
MDM2-230ENST00000543323 TCEAL9Q9UHQ7 104 aa7.76□□□□□ -1.17
MDM2-230ENST00000543323 CBFA2T2O43439 604 aa7.75□□□□□ -1.17
MDM2-230ENST00000543323 SDSP20132 328 aa7.75□□□□□ -1.17
MDM2-230ENST00000543323 CD68P34810 354 aaPredicted RBP7.75□□□□□ -1.17
MDM2-230ENST00000543323 MAP7Q14244 749 aa7.75□□□□□ -1.17
MDM2-230ENST00000543323 FAM50AQ14320 339 aaKnown RBP7.75□□□□□ -1.17
MDM2-230ENST00000543323 FOXD4L6Q3SYB3 417 aaPredicted RBP7.75□□□□□ -1.17
MDM2-230ENST00000543323 EXOSC6Q5RKV6 272 aaKnown RBP7.75□□□□□ -1.17
MDM2-230ENST00000543323 AXDND1Q5T1B0 1012 aaPredicted RBP7.75□□□□□ -1.17
MDM2-230ENST00000543323 CNNM4Q6P4Q7 775 aa7.75□□□□□ -1.17
MDM2-230ENST00000543323 FOXD4L3Q6VB84 417 aaPredicted RBP7.75□□□□□ -1.17
MDM2-230ENST00000543323 C8orf86Q6ZUL3 223 aa7.75□□□□□ -1.17
MDM2-230ENST00000543323 ZNF513Q8N8E2 541 aaPredicted RBP7.75□□□□□ -1.17
MDM2-230ENST00000543323 ATL2Q8NHH9 583 aa7.75□□□□□ -1.17
MDM2-230ENST00000543323 PPP1R14AQ96A00 147 aa7.75□□□□□ -1.17
MDM2-230ENST00000543323 CCDC136Q96JN2 1154 aa7.75□□□□□ -1.17
MDM2-230ENST00000543323 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.75□□□□□ -1.17
MDM2-230ENST00000543323 GEMIN8Q9NWZ8 242 aaKnown RBP7.75□□□□□ -1.17
MDM2-230ENST00000543323 APEX2Q9UBZ4 518 aa7.75□□□□□ -1.17
MDM2-230ENST00000543323 PPP1R9AQ9ULJ8 1098 aa7.75□□□□□ -1.17
MDM2-230ENST00000543323 MAP4K4O95819 1239 aaPredicted RBP7.74□□□□□ -1.17
MDM2-230ENST00000543323 CAPNS1P04632 268 aa7.74□□□□□ -1.17
MDM2-230ENST00000543323 PABPC1P11940 636 aaKnown RBP7.74□□□□□ -1.17
MDM2-230ENST00000543323 CAP2P40123 477 aa7.74□□□□□ -1.17
MDM2-230ENST00000543323 NKG7Q16617 165 aa7.74□□□□□ -1.17
MDM2-230ENST00000543323 NSMFQ6X4W1 530 aa7.74□□□□□ -1.17
MDM2-230ENST00000543323 ILDR2Q71H61 639 aa7.74□□□□□ -1.17
MDM2-230ENST00000543323 CCDC144CPQ8IYA2 1237 aa7.74□□□□□ -1.17
MDM2-230ENST00000543323 GPR161Q8N6U8 529 aaKnown RBP7.74□□□□□ -1.17
MDM2-230ENST00000543323 KCT2Q8NC54 265 aa7.74□□□□□ -1.17
MDM2-230ENST00000543323 BAHD1Q8TBE0 780 aaPredicted RBP7.74□□□□□ -1.17
MDM2-230ENST00000543323 CYB5D2Q8WUJ1 264 aa7.74□□□□□ -1.17
MDM2-230ENST00000543323 FGD4Q96M96 766 aa7.74□□□□□ -1.17
MDM2-230ENST00000543323 DPH2Q9BQC3 489 aaPredicted RBP7.74□□□□□ -1.17
MDM2-230ENST00000543323 GBP3Q9H0R5 595 aa7.74□□□□□ -1.17
MDM2-230ENST00000543323 PRDM6Q9NQX0 595 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms