RNA–Protein interactions for RNA: ENST00000543115.5

PTPN6-220, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 4

Gene PTPN6, Length 650 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-220ENST00000543115 ADD2P35612 726 aa14.6□□□□□ -0.07
PTPN6-220ENST00000543115 SLC44A5Q8NCS7 719 aa14.6□□□□□ -0.07
PTPN6-220ENST00000543115 GPRC5AQ8NFJ5 357 aa14.6□□□□□ -0.07
PTPN6-220ENST00000543115 HAUS7Q99871 368 aa14.6□□□□□ -0.07
PTPN6-220ENST00000543115 PAGR1Q9BTK6 254 aa14.6□□□□□ -0.07
PTPN6-220ENST00000543115 KIAA1683Q9H0B3 1180 aa14.6□□□□□ -0.07
PTPN6-220ENST00000543115 COLQQ9Y215 455 aaPredicted RBP14.6□□□□□ -0.07
PTPN6-220ENST00000543115 NAV1Q8NEY1 1877 aa14.6□□□□□ -0.07
PTPN6-220ENST00000543115 PLXNB2O15031 1838 aa14.59□□□□□ -0.07
PTPN6-220ENST00000543115 CNMDO75829 334 aa14.59□□□□□ -0.07
PTPN6-220ENST00000543115 HMGCRP04035 888 aa14.59□□□□□ -0.07
PTPN6-220ENST00000543115 VCAM1P19320 739 aa14.59□□□□□ -0.07
PTPN6-220ENST00000543115 CYP2B6P20813 491 aa14.59□□□□□ -0.07
PTPN6-220ENST00000543115 ERVK-9P63128 1117 aa14.59□□□□□ -0.07
PTPN6-220ENST00000543115 ERVK-24P63145 666 aa14.59□□□□□ -0.07
PTPN6-220ENST00000543115 SEPT2Q15019 361 aa14.59□□□□□ -0.07
PTPN6-220ENST00000543115 TRIB2Q92519 343 aa14.59□□□□□ -0.07
PTPN6-220ENST00000543115 DPF3Q92784 378 aa14.59□□□□□ -0.07
PTPN6-220ENST00000543115 LRRCC1Q9C099 1032 aa14.59□□□□□ -0.07
PTPN6-220ENST00000543115 CRISPLD2Q9H0B8 497 aa14.59□□□□□ -0.07
PTPN6-220ENST00000543115 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.59□□□□□ -0.07
PTPN6-220ENST00000543115 CABP5Q9NP86 173 aa14.59□□□□□ -0.07
PTPN6-220ENST00000543115 A0A1W2PRG0 241 aa14.58□□□□□ -0.08
PTPN6-220ENST00000543115 USP17L15C9J2P7 530 aa14.58□□□□□ -0.08
PTPN6-220ENST00000543115 USP17L13C9JLJ4 530 aa14.58□□□□□ -0.08
PTPN6-220ENST00000543115 USP17L11C9JVI0 530 aa14.58□□□□□ -0.08
PTPN6-220ENST00000543115 USP17L18D6R9N7 530 aa14.58□□□□□ -0.08
PTPN6-220ENST00000543115 USP17L22D6RA61 530 aa14.58□□□□□ -0.08
PTPN6-220ENST00000543115 USP17L17D6RBQ6 530 aa14.58□□□□□ -0.08
PTPN6-220ENST00000543115 USP17L19D6RCP7 530 aa14.58□□□□□ -0.08
PTPN6-220ENST00000543115 USP17L20D6RJB6 530 aa14.58□□□□□ -0.08
PTPN6-220ENST00000543115 MBD4O95243 580 aa14.58□□□□□ -0.08
PTPN6-220ENST00000543115 TFRCP02786 760 aaKnown RBP14.58□□□□□ -0.08
PTPN6-220ENST00000543115 USP17L24Q0WX57 530 aa14.58□□□□□ -0.08
PTPN6-220ENST00000543115 CATSPERGQ6ZRH7 1159 aa14.58□□□□□ -0.08
PTPN6-220ENST00000543115 DYNLL2Q96FJ2 89 aa14.58□□□□□ -0.08
PTPN6-220ENST00000543115 CYP2D7A0A087X1C5 515 aa14.57□□□□□ -0.08
PTPN6-220ENST00000543115 MAPK4P31152 587 aa14.57□□□□□ -0.08
PTPN6-220ENST00000543115 USP14P54578 494 aa14.57□□□□□ -0.08
PTPN6-220ENST00000543115 GPR142Q7Z601 462 aa14.57□□□□□ -0.08
PTPN6-220ENST00000543115 USP6NLQ92738 828 aa14.57□□□□□ -0.08
PTPN6-220ENST00000543115 NUDT12Q9BQG2 462 aa14.57□□□□□ -0.08
PTPN6-220ENST00000543115 HTATIP2Q9BUP3 242 aa14.57□□□□□ -0.08
PTPN6-220ENST00000543115 DOCK3Q8IZD9 2030 aa14.56□□□□□ -0.08
PTPN6-220ENST00000543115 MPHOSPH10O00566 681 aaKnown RBP14.56□□□□□ -0.08
PTPN6-220ENST00000543115 CCL14Q16627 93 aa14.56□□□□□ -0.08
PTPN6-220ENST00000543115 MORN1Q5T089 497 aa14.56□□□□□ -0.08
PTPN6-220ENST00000543115 MAP3K21Q5TCX8 1036 aa14.56□□□□□ -0.08
PTPN6-220ENST00000543115 CLEC10AQ8IUN9 316 aa14.56□□□□□ -0.08
PTPN6-220ENST00000543115 DIS3LQ8TF46 1054 aaKnown RBP14.56□□□□□ -0.08
PTPN6-220ENST00000543115 GTF3C2Q8WUA4 911 aaPredicted RBP14.56□□□□□ -0.08
PTPN6-220ENST00000543115 SOCS4Q8WXH5 440 aa14.56□□□□□ -0.08
PTPN6-220ENST00000543115 PAWRQ96IZ0 340 aaKnown RBP14.56□□□□□ -0.08
PTPN6-220ENST00000543115 RPAP3Q9H6T3 665 aaPredicted RBP14.56□□□□□ -0.08
PTPN6-220ENST00000543115 HMX1Q9NP08 348 aaPredicted RBP14.56□□□□□ -0.08
PTPN6-220ENST00000543115 BTBD7Q9P203 1132 aa14.56□□□□□ -0.08
PTPN6-220ENST00000543115 RABGAP1Q9Y3P9 1069 aa14.56□□□□□ -0.08
PTPN6-220ENST00000543115 RPTORQ8N122 1335 aa14.56□□□□□ -0.08
PTPN6-220ENST00000543115 SPDYE16A6NNV3 312 aaPredicted RBP14.55□□□□□ -0.08
PTPN6-220ENST00000543115 XRCC5P13010 732 aaKnown RBP14.55□□□□□ -0.08
PTPN6-220ENST00000543115 FXR1P51114 621 aaKnown RBP eCLIP14.55□□□□□ -0.08
PTPN6-220ENST00000543115 UBE3CQ15386 1083 aa14.55□□□□□ -0.08
PTPN6-220ENST00000543115 KIAA1755Q5JYT7 1200 aa14.55□□□□□ -0.08
PTPN6-220ENST00000543115 PLEKHH3Q7Z736 793 aa14.55□□□□□ -0.08
PTPN6-220ENST00000543115 SIAH1Q8IUQ4 282 aa14.55□□□□□ -0.08
PTPN6-220ENST00000543115 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.55□□□□□ -0.08
PTPN6-220ENST00000543115 PUS7LQ9H0K6 701 aaKnown RBP14.55□□□□□ -0.08
PTPN6-220ENST00000543115 ATP8A2Q9NTI2 1148 aa14.55□□□□□ -0.08
PTPN6-220ENST00000543115 USP17L12C9JPN9 530 aa14.54□□□□□ -0.08
PTPN6-220ENST00000543115 USP17L21D6R901 530 aa14.54□□□□□ -0.08
PTPN6-220ENST00000543115 PRKAR2AP13861 404 aaKnown RBP14.54□□□□□ -0.08
PTPN6-220ENST00000543115 AKR1B1P15121 316 aa14.54□□□□□ -0.08
PTPN6-220ENST00000543115 MNX1P50219 401 aaPredicted RBP14.54□□□□□ -0.08
PTPN6-220ENST00000543115 C12orf60Q5U649 245 aa14.54□□□□□ -0.08
PTPN6-220ENST00000543115 TSHZ3Q63HK5 1081 aa14.54□□□□□ -0.08
PTPN6-220ENST00000543115 CHRDL2Q6WN34 429 aa14.54□□□□□ -0.08
PTPN6-220ENST00000543115 LBX2Q6XYB7 198 aa14.54□□□□□ -0.08
PTPN6-220ENST00000543115 TMEM179Q6ZVK1 233 aa14.54□□□□□ -0.08
PTPN6-220ENST00000543115 CCAR1Q8IX12 1150 aaKnown RBP14.54□□□□□ -0.08
PTPN6-220ENST00000543115 DCTPP1Q9H773 170 aa14.54□□□□□ -0.08
PTPN6-220ENST00000543115 ECHDC1Q9NTX5 307 aa14.54□□□□□ -0.08
PTPN6-220ENST00000543115 SWAP70Q9UH65 585 aa14.54□□□□□ -0.08
PTPN6-220ENST00000543115 ZKSCAN1P17029 563 aaPredicted RBP14.53□□□□□ -0.08
PTPN6-220ENST00000543115 CAPN2P17655 700 aa14.53□□□□□ -0.08
PTPN6-220ENST00000543115 RGS2P41220 211 aa14.53□□□□□ -0.08
PTPN6-220ENST00000543115 CDK8P49336 464 aa14.53□□□□□ -0.08
PTPN6-220ENST00000543115 CACNB2Q08289 660 aaPredicted RBP14.53□□□□□ -0.08
PTPN6-220ENST00000543115 RBM27Q9P2N5 1060 aaKnown RBP14.53□□□□□ -0.08
PTPN6-220ENST00000543115 SLC4A4Q9Y6R1 1079 aa14.53□□□□□ -0.08
PTPN6-220ENST00000543115 PTPREP23469 700 aa14.52□□□□□ -0.09
PTPN6-220ENST00000543115 CCND3P30281 292 aaPredicted RBP14.52□□□□□ -0.09
PTPN6-220ENST00000543115 MAP2K5Q13163 448 aa14.52□□□□□ -0.09
PTPN6-220ENST00000543115 WDR78Q5VTH9 848 aa14.52□□□□□ -0.09
PTPN6-220ENST00000543115 CTR9Q6PD62 1173 aa14.52□□□□□ -0.09
PTPN6-220ENST00000543115 NECAB2Q7Z6G3 386 aa14.52□□□□□ -0.09
PTPN6-220ENST00000543115 APBA2Q99767 749 aa14.52□□□□□ -0.09
PTPN6-220ENST00000543115 CWC22Q9HCG8 908 aaKnown RBP14.52□□□□□ -0.09
PTPN6-220ENST00000543115 FLRT1Q9NZU1 646 aa14.52□□□□□ -0.09
PTPN6-220ENST00000543115 OGDHLQ9ULD0 1010 aa14.52□□□□□ -0.09
PTPN6-220ENST00000543115 EVI5O60447 810 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms