RNA–Protein interactions for RNA: ENST00000542841.1

SRGAP1-205, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 836 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-205ENST00000542841 VCANP13611 3396 aa13.86□□□□□ -0.19
SRGAP1-205ENST00000542841 REC8O95072 547 aa13.86□□□□□ -0.19
SRGAP1-205ENST00000542841 MAP4K4O95819 1239 aaPredicted RBP13.86□□□□□ -0.19
SRGAP1-205ENST00000542841 ZKSCAN1P17029 563 aaPredicted RBP13.86□□□□□ -0.19
SRGAP1-205ENST00000542841 TIMM10P62072 90 aa13.86□□□□□ -0.19
SRGAP1-205ENST00000542841 FAM109BQ6ICB4 259 aaPredicted RBP13.86□□□□□ -0.19
SRGAP1-205ENST00000542841 GPRC5AQ8NFJ5 357 aa13.86□□□□□ -0.19
SRGAP1-205ENST00000542841 XAGE2Q96GT9 111 aa13.86□□□□□ -0.19
SRGAP1-205ENST00000542841 TMOD4Q9NZQ9 345 aa13.86□□□□□ -0.19
SRGAP1-205ENST00000542841 MYH7P12883 1935 aa13.86□□□□□ -0.19
SRGAP1-205ENST00000542841 POTEB2H3BUK9 544 aa13.85□□□□□ -0.19
SRGAP1-205ENST00000542841 UQCRFS1P1P0C7P4 283 aa13.85□□□□□ -0.19
SRGAP1-205ENST00000542841 CHMLP26374 656 aa13.85□□□□□ -0.19
SRGAP1-205ENST00000542841 MAPK4P31152 587 aa13.85□□□□□ -0.19
SRGAP1-205ENST00000542841 GSTO1P78417 241 aa13.85□□□□□ -0.19
SRGAP1-205ENST00000542841 CACNB2Q08289 660 aaPredicted RBP13.85□□□□□ -0.19
SRGAP1-205ENST00000542841 MTMR2Q13614 643 aa13.85□□□□□ -0.19
SRGAP1-205ENST00000542841 LRRC26Q2I0M4 334 aa13.85□□□□□ -0.19
SRGAP1-205ENST00000542841 GORABQ5T7V8 394 aa13.85□□□□□ -0.19
SRGAP1-205ENST00000542841 CCAR1Q8IX12 1150 aaKnown RBP13.85□□□□□ -0.19
SRGAP1-205ENST00000542841 RUFY2Q8WXA3 655 aa13.85□□□□□ -0.19
SRGAP1-205ENST00000542841 GUCD1Q96NT3 240 aa13.85□□□□□ -0.19
SRGAP1-205ENST00000542841 HERC5Q9UII4 1024 aaKnown RBP13.85□□□□□ -0.19
SRGAP1-205ENST00000542841 COL2A1P02458 1487 aaPredicted RBP13.85□□□□□ -0.19
SRGAP1-205ENST00000542841 LDHCP07864 332 aa13.84□□□□□ -0.19
SRGAP1-205ENST00000542841 HOXA7P31268 230 aaPredicted RBP13.84□□□□□ -0.19
SRGAP1-205ENST00000542841 ANP32AP39687 249 aaKnown RBP13.84□□□□□ -0.19
SRGAP1-205ENST00000542841 BACE1P56817 501 aa13.84□□□□□ -0.19
SRGAP1-205ENST00000542841 LRRFIP1Q32MZ4 808 aaKnown RBP13.84□□□□□ -0.19
SRGAP1-205ENST00000542841 TTC39AQ5SRH9 613 aa13.84□□□□□ -0.19
SRGAP1-205ENST00000542841 LHX8Q68G74 356 aa13.84□□□□□ -0.19
SRGAP1-205ENST00000542841 TBC1D32Q96NH3 1257 aa13.84□□□□□ -0.19
SRGAP1-205ENST00000542841 P2RX7Q99572 595 aaKnown RBP13.84□□□□□ -0.19
SRGAP1-205ENST00000542841 LBHD1Q9BQE6 289 aaPredicted RBP13.84□□□□□ -0.19
SRGAP1-205ENST00000542841 WDR18Q9BV38 432 aa13.84□□□□□ -0.19
SRGAP1-205ENST00000542841 BOLA2Q9H3K6 86 aa13.84□□□□□ -0.19
SRGAP1-205ENST00000542841 TXNRD2Q9NNW7 524 aa13.84□□□□□ -0.19
SRGAP1-205ENST00000542841 RAD50Q92878 1312 aa13.84□□□□□ -0.19
SRGAP1-205ENST00000542841 PLXNB2O15031 1838 aa13.83□□□□□ -0.2
SRGAP1-205ENST00000542841 C19orf81C9J6K1 198 aa13.83□□□□□ -0.2
SRGAP1-205ENST00000542841 SEC24BO95487 1268 aa13.83□□□□□ -0.2
SRGAP1-205ENST00000542841 ARID4AP29374 1257 aaPredicted RBP13.83□□□□□ -0.2
SRGAP1-205ENST00000542841 CCND3P30281 292 aaPredicted RBP13.83□□□□□ -0.2
SRGAP1-205ENST00000542841 RGS2P41220 211 aa13.83□□□□□ -0.2
SRGAP1-205ENST00000542841 MFAP1P55081 439 aaKnown RBP13.83□□□□□ -0.2
SRGAP1-205ENST00000542841 HERVK_113P62684 666 aa13.83□□□□□ -0.2
SRGAP1-205ENST00000542841 RRP1BQ14684 758 aaKnown RBP13.83□□□□□ -0.2
SRGAP1-205ENST00000542841 ZNF384Q8TF68 577 aa13.83□□□□□ -0.2
SRGAP1-205ENST00000542841 FAM161BQ96MY7 647 aa13.83□□□□□ -0.2
SRGAP1-205ENST00000542841 ESYT1Q9BSJ8 1104 aa13.83□□□□□ -0.2
SRGAP1-205ENST00000542841 PI4KBQ9UBF8 816 aa13.83□□□□□ -0.2
SRGAP1-205ENST00000542841 PEX10O60683 326 aa13.82□□□□□ -0.2
SRGAP1-205ENST00000542841 ASNSP08243 561 aa13.82□□□□□ -0.2
SRGAP1-205ENST00000542841 RBM25P49756 843 aaKnown RBP13.82□□□□□ -0.2
SRGAP1-205ENST00000542841 ERVK-9P63128 1117 aa13.82□□□□□ -0.2
SRGAP1-205ENST00000542841 ERVK-24P63145 666 aa13.82□□□□□ -0.2
SRGAP1-205ENST00000542841 ZNF697Q5TEC3 545 aa13.82□□□□□ -0.2
SRGAP1-205ENST00000542841 GPR142Q7Z601 462 aa13.82□□□□□ -0.2
SRGAP1-205ENST00000542841 TEX11Q8IYF3 940 aa13.82□□□□□ -0.2
SRGAP1-205ENST00000542841 GTF3C2Q8WUA4 911 aaPredicted RBP13.82□□□□□ -0.2
SRGAP1-205ENST00000542841 USP6NLQ92738 828 aa13.82□□□□□ -0.2
SRGAP1-205ENST00000542841 NSUN4Q96CB9 384 aaKnown RBP13.82□□□□□ -0.2
SRGAP1-205ENST00000542841 APBA2Q99767 749 aa13.82□□□□□ -0.2
SRGAP1-205ENST00000542841 C22orf23Q9BZE7 217 aa13.82□□□□□ -0.2
SRGAP1-205ENST00000542841 SENP6Q9GZR1 1112 aaPredicted RBP13.82□□□□□ -0.2
SRGAP1-205ENST00000542841 DHX36Q9H2U1 1008 aaKnown RBP13.82□□□□□ -0.2
SRGAP1-205ENST00000542841 DIAPH3Q9NSV4 1193 aa13.82□□□□□ -0.2
SRGAP1-205ENST00000542841 PAG1Q9NWQ8 432 aa13.82□□□□□ -0.2
SRGAP1-205ENST00000542841 ATAD5Q96QE3 1844 aa13.81□□□□□ -0.2
SRGAP1-205ENST00000542841 USP17L10C9JJH3 530 aa13.81□□□□□ -0.2
SRGAP1-205ENST00000542841 TTF1Q15361 905 aaPredicted RBP13.81□□□□□ -0.2
SRGAP1-205ENST00000542841 CCL14Q16627 93 aa13.81□□□□□ -0.2
SRGAP1-205ENST00000542841 Q3C1V9 767 aa13.81□□□□□ -0.2
SRGAP1-205ENST00000542841 MORN1Q5T089 497 aa13.81□□□□□ -0.2
SRGAP1-205ENST00000542841 PLEKHH3Q7Z736 793 aa13.81□□□□□ -0.2
SRGAP1-205ENST00000542841 KBTBD3Q8NAB2 608 aa13.81□□□□□ -0.2
SRGAP1-205ENST00000542841 NOL10Q9BSC4 688 aaKnown RBP13.81□□□□□ -0.2
SRGAP1-205ENST00000542841 FSD1Q9BTV5 496 aa13.81□□□□□ -0.2
SRGAP1-205ENST00000542841 CWC22Q9HCG8 908 aaKnown RBP13.81□□□□□ -0.2
SRGAP1-205ENST00000542841 SNRKQ9NRH2 765 aa13.81□□□□□ -0.2
SRGAP1-205ENST00000542841 RAI14Q9P0K7 980 aa13.81□□□□□ -0.2
SRGAP1-205ENST00000542841 RBPJLQ9UBG7 517 aa13.81□□□□□ -0.2
SRGAP1-205ENST00000542841 PRKAG2Q9UGJ0 569 aa13.81□□□□□ -0.2
SRGAP1-205ENST00000542841 LAMA2P24043 3122 aaKnown RBP13.81□□□□□ -0.2
SRGAP1-205ENST00000542841 EYSQ5T1H1 3165 aa13.8□□□□□ -0.2
SRGAP1-205ENST00000542841 SGSM2O43147 1006 aa13.8□□□□□ -0.2
SRGAP1-205ENST00000542841 IGSF3O75054 1194 aa13.8□□□□□ -0.2
SRGAP1-205ENST00000542841 ZFYP08048 801 aaPredicted RBP13.8□□□□□ -0.2
SRGAP1-205ENST00000542841 SPATA5Q8NB90 893 aa13.8□□□□□ -0.2
SRGAP1-205ENST00000542841 IL27Q8NEV9 243 aa13.8□□□□□ -0.2
SRGAP1-205ENST00000542841 DDRGK1Q96HY6 314 aa13.8□□□□□ -0.2
SRGAP1-205ENST00000542841 PAGR1Q9BTK6 254 aa13.8□□□□□ -0.2
SRGAP1-205ENST00000542841 TRIM34Q9BYJ4 488 aa13.8□□□□□ -0.2
SRGAP1-205ENST00000542841 PORCNQ9H237 461 aa13.8□□□□□ -0.2
SRGAP1-205ENST00000542841 HMG20BQ9P0W2 317 aa13.8□□□□□ -0.2
SRGAP1-205ENST00000542841 MFSD14CQ5VZR4 134 aa13.79□□□□□ -0.2
SRGAP1-205ENST00000542841 SH3RF3Q8TEJ3 882 aaPredicted RBP13.79□□□□□ -0.2
SRGAP1-205ENST00000542841 EDC3Q96F86 508 aaKnown RBP13.79□□□□□ -0.2
SRGAP1-205ENST00000542841 DNAJC2Q99543 621 aaKnown RBP13.79□□□□□ -0.2
SRGAP1-205ENST00000542841 GINM1Q9NU53 330 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms