RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 ACER1Q8TDN7 264 aa18.5■□□□□ 0.55
ECHDC2-223ENST00000542552 CCDC17Q96LX7 622 aa18.5■□□□□ 0.55
ECHDC2-223ENST00000542552 ASCC2Q9H1I8 757 aaPredicted RBP18.5■□□□□ 0.55
ECHDC2-223ENST00000542552 HELLSQ9NRZ9 838 aa18.5■□□□□ 0.55
ECHDC2-223ENST00000542552 FOXP2O15409 715 aa18.49■□□□□ 0.55
ECHDC2-223ENST00000542552 GNRH1P01148 92 aa18.49■□□□□ 0.55
ECHDC2-223ENST00000542552 AKR1B1P15121 316 aa18.49■□□□□ 0.55
ECHDC2-223ENST00000542552 PDE4AP27815 886 aa18.49■□□□□ 0.55
ECHDC2-223ENST00000542552 KIF22Q14807 665 aa18.49■□□□□ 0.55
ECHDC2-223ENST00000542552 SIAH1Q8IUQ4 282 aa18.49■□□□□ 0.55
ECHDC2-223ENST00000542552 SMCR8Q8TEV9 937 aaPredicted RBP18.49■□□□□ 0.55
ECHDC2-223ENST00000542552 MGAMO43451 1857 aa18.49■□□□□ 0.55
ECHDC2-223ENST00000542552 A0A1W2PRG0 241 aa18.48■□□□□ 0.55
ECHDC2-223ENST00000542552 MPHOSPH10O00566 681 aaKnown RBP18.48■□□□□ 0.55
ECHDC2-223ENST00000542552 APPP05067 770 aa18.48■□□□□ 0.55
ECHDC2-223ENST00000542552 OSBPP22059 807 aa18.48■□□□□ 0.55
ECHDC2-223ENST00000542552 TDO2P48775 406 aa18.48■□□□□ 0.55
ECHDC2-223ENST00000542552 USP14P54578 494 aa18.48■□□□□ 0.55
ECHDC2-223ENST00000542552 CCDC129Q6ZRS4 1044 aa18.48■□□□□ 0.55
ECHDC2-223ENST00000542552 TRIM47Q96LD4 638 aa18.48■□□□□ 0.55
ECHDC2-223ENST00000542552 FAM227BQ96M60 508 aa18.48■□□□□ 0.55
ECHDC2-223ENST00000542552 GREB1LQ9C091 1923 aaPredicted RBP18.48■□□□□ 0.55
ECHDC2-223ENST00000542552 MINDY4BA8MYZ0 360 aa18.47■□□□□ 0.55
ECHDC2-223ENST00000542552 TRIM6-TRIM34B2RNG4 842 aa18.47■□□□□ 0.55
ECHDC2-223ENST00000542552 PSMC4P43686 418 aa18.47■□□□□ 0.55
ECHDC2-223ENST00000542552 GCLCP48506 637 aaPredicted RBP18.47■□□□□ 0.55
ECHDC2-223ENST00000542552 NACAP1Q9BZK3 213 aa18.47■□□□□ 0.55
ECHDC2-223ENST00000542552 BRCA2P51587 3418 aa18.47■□□□□ 0.55
ECHDC2-223ENST00000542552 A0A0D9SFI3 127 aa18.46■□□□□ 0.55
ECHDC2-223ENST00000542552 RASA1P20936 1047 aa18.46■□□□□ 0.55
ECHDC2-223ENST00000542552 FAM110CQ1W6H9 321 aa18.46■□□□□ 0.55
ECHDC2-223ENST00000542552 MCMDC2Q4G0Z9 681 aa18.46■□□□□ 0.55
ECHDC2-223ENST00000542552 RILPL2Q969X0 211 aa18.46■□□□□ 0.55
ECHDC2-223ENST00000542552 P2RX7Q99572 595 aaKnown RBP18.46■□□□□ 0.55
ECHDC2-223ENST00000542552 FEZ1Q99689 392 aa18.46■□□□□ 0.55
ECHDC2-223ENST00000542552 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.46■□□□□ 0.55
ECHDC2-223ENST00000542552 VCAM1P19320 739 aa18.45■□□□□ 0.54
ECHDC2-223ENST00000542552 SDSP20132 328 aa18.45■□□□□ 0.54
ECHDC2-223ENST00000542552 PRMT2P55345 433 aa18.45■□□□□ 0.54
ECHDC2-223ENST00000542552 HERVK_113P62684 666 aa18.45■□□□□ 0.54
ECHDC2-223ENST00000542552 IRX3P78415 501 aaPredicted RBP18.45■□□□□ 0.54
ECHDC2-223ENST00000542552 NMIQ13287 307 aaPredicted RBP18.45■□□□□ 0.54
ECHDC2-223ENST00000542552 ALX1Q15699 326 aa18.45■□□□□ 0.54
ECHDC2-223ENST00000542552 ZYXQ15942 572 aaKnown RBP18.45■□□□□ 0.54
ECHDC2-223ENST00000542552 VPS53Q5VIR6 699 aa18.45■□□□□ 0.54
ECHDC2-223ENST00000542552 ANKRD13CQ8N6S4 541 aa18.45■□□□□ 0.54
ECHDC2-223ENST00000542552 MORF4L1Q9UBU8 362 aa18.45■□□□□ 0.54
ECHDC2-223ENST00000542552 USP17L15C9J2P7 530 aa18.44■□□□□ 0.54
ECHDC2-223ENST00000542552 USP17L13C9JLJ4 530 aa18.44■□□□□ 0.54
ECHDC2-223ENST00000542552 USP17L11C9JVI0 530 aa18.44■□□□□ 0.54
ECHDC2-223ENST00000542552 USP17L18D6R9N7 530 aa18.44■□□□□ 0.54
ECHDC2-223ENST00000542552 USP17L22D6RA61 530 aa18.44■□□□□ 0.54
ECHDC2-223ENST00000542552 USP17L17D6RBQ6 530 aa18.44■□□□□ 0.54
ECHDC2-223ENST00000542552 USP17L19D6RCP7 530 aa18.44■□□□□ 0.54
ECHDC2-223ENST00000542552 USP17L20D6RJB6 530 aa18.44■□□□□ 0.54
ECHDC2-223ENST00000542552 ICA1Q05084 483 aa18.44■□□□□ 0.54
ECHDC2-223ENST00000542552 USP17L24Q0WX57 530 aa18.44■□□□□ 0.54
ECHDC2-223ENST00000542552 POTEEQ6S8J3 1075 aa18.44■□□□□ 0.54
ECHDC2-223ENST00000542552 CLEC10AQ8IUN9 316 aa18.44■□□□□ 0.54
ECHDC2-223ENST00000542552 NAPBQ9H115 298 aa18.44■□□□□ 0.54
ECHDC2-223ENST00000542552 KANSL2Q9H9L4 492 aa18.44■□□□□ 0.54
ECHDC2-223ENST00000542552 SRRDQ9UH36 339 aa18.44■□□□□ 0.54
ECHDC2-223ENST00000542552 TMX2Q9Y320 296 aa18.44■□□□□ 0.54
ECHDC2-223ENST00000542552 PTCH2Q9Y6C5 1203 aa18.44■□□□□ 0.54
ECHDC2-223ENST00000542552 FMNL1O95466 1100 aaPredicted RBP18.43■□□□□ 0.54
ECHDC2-223ENST00000542552 RGS19P49795 217 aa18.43■□□□□ 0.54
ECHDC2-223ENST00000542552 FCGRTP55899 365 aa18.43■□□□□ 0.54
ECHDC2-223ENST00000542552 KIAA1755Q5JYT7 1200 aa18.43■□□□□ 0.54
ECHDC2-223ENST00000542552 CATSPERGQ6ZRH7 1159 aa18.43■□□□□ 0.54
ECHDC2-223ENST00000542552 ARMC5Q96C12 935 aa18.43■□□□□ 0.54
ECHDC2-223ENST00000542552 MKNK2Q9HBH9 465 aa18.43■□□□□ 0.54
ECHDC2-223ENST00000542552 ARHGEF10LQ9HCE6 1279 aa18.43■□□□□ 0.54
ECHDC2-223ENST00000542552 HOXD10P28358 340 aa18.42■□□□□ 0.54
ECHDC2-223ENST00000542552 PPARAQ07869 468 aa18.42■□□□□ 0.54
ECHDC2-223ENST00000542552 ZNF589Q86UQ0 364 aaPredicted RBP18.42■□□□□ 0.54
ECHDC2-223ENST00000542552 STK11IPQ8N1F8 1099 aa18.42■□□□□ 0.54
ECHDC2-223ENST00000542552 ZNF287Q9HBT7 754 aa18.42■□□□□ 0.54
ECHDC2-223ENST00000542552 TXNRD2Q9NNW7 524 aa18.42■□□□□ 0.54
ECHDC2-223ENST00000542552 RBPJLQ9UBG7 517 aa18.42■□□□□ 0.54
ECHDC2-223ENST00000542552 ANAPC4Q9UJX5 808 aa18.42■□□□□ 0.54
ECHDC2-223ENST00000542552 RLFQ13129 1914 aa18.42■□□□□ 0.54
ECHDC2-223ENST00000542552 DOCK3Q8IZD9 2030 aa18.42■□□□□ 0.54
ECHDC2-223ENST00000542552 IGKV6D-41A0A0C4DH26 115 aa18.41■□□□□ 0.54
ECHDC2-223ENST00000542552 ECM2O94769 699 aaPredicted RBP18.41■□□□□ 0.54
ECHDC2-223ENST00000542552 EEF2P13639 858 aaKnown RBP18.41■□□□□ 0.54
ECHDC2-223ENST00000542552 GSPT1P15170 499 aaKnown RBP18.41■□□□□ 0.54
ECHDC2-223ENST00000542552 TTC22Q5TAA0 569 aa18.41■□□□□ 0.54
ECHDC2-223ENST00000542552 LBX2Q6XYB7 198 aa18.41■□□□□ 0.54
ECHDC2-223ENST00000542552 GTF3C2Q8WUA4 911 aaPredicted RBP18.41■□□□□ 0.54
ECHDC2-223ENST00000542552 LPAR1Q92633 364 aa18.41■□□□□ 0.54
ECHDC2-223ENST00000542552 RPAP3Q9H6T3 665 aaPredicted RBP18.41■□□□□ 0.54
ECHDC2-223ENST00000542552 SH2D4AQ9H788 454 aa18.41■□□□□ 0.54
ECHDC2-223ENST00000542552 VCPKMTQ9H867 229 aa18.41■□□□□ 0.54
ECHDC2-223ENST00000542552 ZMYM6O95789 1325 aa18.41■□□□□ 0.54
ECHDC2-223ENST00000542552 CCDC171Q6TFL3 1326 aa18.41■□□□□ 0.54
ECHDC2-223ENST00000542552 TNRC18O15417 2968 aaPredicted RBP18.41■□□□□ 0.54
ECHDC2-223ENST00000542552 PRDM1O75626 825 aa18.4■□□□□ 0.54
ECHDC2-223ENST00000542552 FGAP02671 866 aa18.4■□□□□ 0.54
ECHDC2-223ENST00000542552 HSPD1P10809 573 aaKnown RBP18.4■□□□□ 0.54
ECHDC2-223ENST00000542552 PDE4BQ07343 736 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms