RNA–Protein interactions for RNA: ENST00000542340.1

CACNA2D4-215, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 3

Gene CACNA2D4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-215ENST00000542340 CAP1Q01518 475 aa24■■□□□ 1.43
CACNA2D4-215ENST00000542340 C12orf42Q96LP6 360 aa24■■□□□ 1.43
CACNA2D4-215ENST00000542340 FEZ1Q99689 392 aa24■■□□□ 1.43
CACNA2D4-215ENST00000542340 EMILIN3Q9NT22 766 aa24■■□□□ 1.43
CACNA2D4-215ENST00000542340 CAPN15O75808 1086 aa23.99■■□□□ 1.43
CACNA2D4-215ENST00000542340 USP14P54578 494 aa23.99■■□□□ 1.43
CACNA2D4-215ENST00000542340 MCMDC2Q4G0Z9 681 aa23.99■■□□□ 1.43
CACNA2D4-215ENST00000542340 CCDC129Q6ZRS4 1044 aa23.99■■□□□ 1.43
CACNA2D4-215ENST00000542340 ACER1Q8TDN7 264 aa23.99■■□□□ 1.43
CACNA2D4-215ENST00000542340 FAM227BQ96M60 508 aa23.99■■□□□ 1.43
CACNA2D4-215ENST00000542340 ASCC2Q9H1I8 757 aaPredicted RBP23.99■■□□□ 1.43
CACNA2D4-215ENST00000542340 ROBO3Q96MS0 1386 aa23.99■■□□□ 1.43
CACNA2D4-215ENST00000542340 GNRH1P01148 92 aa23.98■■□□□ 1.43
CACNA2D4-215ENST00000542340 SDSP20132 328 aa23.98■■□□□ 1.43
CACNA2D4-215ENST00000542340 NAPBQ9H115 298 aa23.98■■□□□ 1.43
CACNA2D4-215ENST00000542340 HPS5Q9UPZ3 1129 aa23.98■■□□□ 1.43
CACNA2D4-215ENST00000542340 A0A0D9SFI3 127 aa23.97■■□□□ 1.43
CACNA2D4-215ENST00000542340 NMIQ13287 307 aaPredicted RBP23.97■■□□□ 1.43
CACNA2D4-215ENST00000542340 ARHGAP39Q9C0H5 1083 aa23.97■■□□□ 1.43
CACNA2D4-215ENST00000542340 MKNK2Q9HBH9 465 aa23.97■■□□□ 1.43
CACNA2D4-215ENST00000542340 ZNF287Q9HBT7 754 aa23.97■■□□□ 1.43
CACNA2D4-215ENST00000542340 PTPN22Q9Y2R2 807 aa23.97■■□□□ 1.43
CACNA2D4-215ENST00000542340 CCDC85CA6NKD9 419 aa23.96■■□□□ 1.43
CACNA2D4-215ENST00000542340 FOXP2O15409 715 aa23.96■■□□□ 1.43
CACNA2D4-215ENST00000542340 GCLCP48506 637 aaPredicted RBP23.96■■□□□ 1.43
CACNA2D4-215ENST00000542340 IRX3P78415 501 aaPredicted RBP23.96■■□□□ 1.43
CACNA2D4-215ENST00000542340 ZYXQ15942 572 aaKnown RBP23.96■■□□□ 1.43
CACNA2D4-215ENST00000542340 A0A1W2PRG0 241 aa23.95■■□□□ 1.42
CACNA2D4-215ENST00000542340 HIP1O00291 1037 aa23.94■■□□□ 1.42
CACNA2D4-215ENST00000542340 RASA1P20936 1047 aa23.94■■□□□ 1.42
CACNA2D4-215ENST00000542340 PSMC4P43686 418 aa23.94■■□□□ 1.42
CACNA2D4-215ENST00000542340 ICA1Q05084 483 aa23.94■■□□□ 1.42
CACNA2D4-215ENST00000542340 ALX1Q15699 326 aa23.94■■□□□ 1.42
CACNA2D4-215ENST00000542340 FAM110CQ1W6H9 321 aa23.94■■□□□ 1.42
CACNA2D4-215ENST00000542340 TTC22Q5TAA0 569 aa23.94■■□□□ 1.42
CACNA2D4-215ENST00000542340 VPS53Q5VIR6 699 aa23.94■■□□□ 1.42
CACNA2D4-215ENST00000542340 SIAH1Q8IUQ4 282 aa23.94■■□□□ 1.42
CACNA2D4-215ENST00000542340 STK11IPQ8N1F8 1099 aa23.94■■□□□ 1.42
CACNA2D4-215ENST00000542340 KANSL2Q9H9L4 492 aa23.94■■□□□ 1.42
CACNA2D4-215ENST00000542340 ARHGEF10LQ9HCE6 1279 aa23.94■■□□□ 1.42
CACNA2D4-215ENST00000542340 MYH8P13535 1937 aa23.94■■□□□ 1.42
CACNA2D4-215ENST00000542340 USP17L15C9J2P7 530 aa23.93■■□□□ 1.42
CACNA2D4-215ENST00000542340 USP17L13C9JLJ4 530 aa23.93■■□□□ 1.42
CACNA2D4-215ENST00000542340 USP17L11C9JVI0 530 aa23.93■■□□□ 1.42
CACNA2D4-215ENST00000542340 USP17L18D6R9N7 530 aa23.93■■□□□ 1.42
CACNA2D4-215ENST00000542340 USP17L22D6RA61 530 aa23.93■■□□□ 1.42
CACNA2D4-215ENST00000542340 USP17L17D6RBQ6 530 aa23.93■■□□□ 1.42
CACNA2D4-215ENST00000542340 USP17L19D6RCP7 530 aa23.93■■□□□ 1.42
CACNA2D4-215ENST00000542340 USP17L20D6RJB6 530 aa23.93■■□□□ 1.42
CACNA2D4-215ENST00000542340 SLC3A2P08195 630 aaKnown RBP23.93■■□□□ 1.42
CACNA2D4-215ENST00000542340 CTGFP29279 349 aa23.93■■□□□ 1.42
CACNA2D4-215ENST00000542340 PRMT2P55345 433 aa23.93■■□□□ 1.42
CACNA2D4-215ENST00000542340 PPARAQ07869 468 aa23.93■■□□□ 1.42
CACNA2D4-215ENST00000542340 USP17L24Q0WX57 530 aa23.93■■□□□ 1.42
CACNA2D4-215ENST00000542340 ANKRD13CQ8N6S4 541 aa23.93■■□□□ 1.42
CACNA2D4-215ENST00000542340 TRIM47Q96LD4 638 aa23.93■■□□□ 1.42
CACNA2D4-215ENST00000542340 P2RX7Q99572 595 aaKnown RBP23.93■■□□□ 1.42
CACNA2D4-215ENST00000542340 SH2D4AQ9H788 454 aa23.93■■□□□ 1.42
CACNA2D4-215ENST00000542340 CCDC171Q6TFL3 1326 aa23.92■■□□□ 1.42
CACNA2D4-215ENST00000542340 FMNL1O95466 1100 aaPredicted RBP23.92■■□□□ 1.42
CACNA2D4-215ENST00000542340 VCAM1P19320 739 aa23.92■■□□□ 1.42
CACNA2D4-215ENST00000542340 HOXD10P28358 340 aa23.92■■□□□ 1.42
CACNA2D4-215ENST00000542340 MFAP1P55081 439 aaKnown RBP23.92■■□□□ 1.42
CACNA2D4-215ENST00000542340 FCGRTP55899 365 aa23.92■■□□□ 1.42
CACNA2D4-215ENST00000542340 HERVK_113P62684 666 aa23.92■■□□□ 1.42
CACNA2D4-215ENST00000542340 PDE4BQ07343 736 aa23.92■■□□□ 1.42
CACNA2D4-215ENST00000542340 ZNF444Q8N0Y2 327 aaPredicted RBP23.92■■□□□ 1.42
CACNA2D4-215ENST00000542340 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.92■■□□□ 1.42
CACNA2D4-215ENST00000542340 DIAPH3Q9NSV4 1193 aa23.92■■□□□ 1.42
CACNA2D4-215ENST00000542340 TMX2Q9Y320 296 aa23.92■■□□□ 1.42
CACNA2D4-215ENST00000542340 HSPD1P10809 573 aaKnown RBP23.91■■□□□ 1.42
CACNA2D4-215ENST00000542340 GSPT1P15170 499 aaKnown RBP23.91■■□□□ 1.42
CACNA2D4-215ENST00000542340 CATSPERGQ6ZRH7 1159 aa23.91■■□□□ 1.42
CACNA2D4-215ENST00000542340 ZNF589Q86UQ0 364 aaPredicted RBP23.91■■□□□ 1.42
CACNA2D4-215ENST00000542340 CLEC10AQ8IUN9 316 aa23.91■■□□□ 1.42
CACNA2D4-215ENST00000542340 GTF3C2Q8WUA4 911 aaPredicted RBP23.91■■□□□ 1.42
CACNA2D4-215ENST00000542340 MORF4L1Q9UBU8 362 aa23.91■■□□□ 1.42
CACNA2D4-215ENST00000542340 EEF2P13639 858 aaKnown RBP23.9■■□□□ 1.42
CACNA2D4-215ENST00000542340 CWC27Q6UX04 472 aaKnown RBP23.9■■□□□ 1.42
CACNA2D4-215ENST00000542340 LPAR1Q92633 364 aa23.9■■□□□ 1.42
CACNA2D4-215ENST00000542340 ANAPC4Q9UJX5 808 aa23.9■■□□□ 1.42
CACNA2D4-215ENST00000542340 PRDM1O75626 825 aa23.89■■□□□ 1.41
CACNA2D4-215ENST00000542340 ECM2O94769 699 aaPredicted RBP23.89■■□□□ 1.41
CACNA2D4-215ENST00000542340 FGAP02671 866 aa23.89■■□□□ 1.41
CACNA2D4-215ENST00000542340 CENPQQ7L2Z9 268 aaPredicted RBP23.89■■□□□ 1.41
CACNA2D4-215ENST00000542340 RPAP3Q9H6T3 665 aaPredicted RBP23.89■■□□□ 1.41
CACNA2D4-215ENST00000542340 VCPKMTQ9H867 229 aa23.89■■□□□ 1.41
CACNA2D4-215ENST00000542340 SRRDQ9UH36 339 aa23.89■■□□□ 1.41
CACNA2D4-215ENST00000542340 ZMYM6O95789 1325 aa23.88■■□□□ 1.41
CACNA2D4-215ENST00000542340 PTCH2Q9Y6C5 1203 aa23.88■■□□□ 1.41
CACNA2D4-215ENST00000542340 ATP2B2Q01814 1243 aa23.87■■□□□ 1.41
CACNA2D4-215ENST00000542340 GPRC5AQ8NFJ5 357 aa23.87■■□□□ 1.41
CACNA2D4-215ENST00000542340 NYAP2Q9P242 653 aa23.87■■□□□ 1.41
CACNA2D4-215ENST00000542340 RBPJLQ9UBG7 517 aa23.87■■□□□ 1.41
CACNA2D4-215ENST00000542340 HTTP42858 3142 aa23.87■■□□□ 1.41
CACNA2D4-215ENST00000542340 ZSWIM8A7E2V4 1837 aa23.87■■□□□ 1.41
CACNA2D4-215ENST00000542340 IGKV6D-41A0A0C4DH26 115 aa23.86■■□□□ 1.41
CACNA2D4-215ENST00000542340 CTDSPL2Q05D32 466 aa23.86■■□□□ 1.41
CACNA2D4-215ENST00000542340 KIAA1755Q5JYT7 1200 aa23.86■■□□□ 1.41
CACNA2D4-215ENST00000542340 LBX2Q6XYB7 198 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms