RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 RASSF8Q8NHQ8 419 aa17.4■□□□□ 0.38
CNOT9-208ENST00000542068 PLA2G12BQ9BX93 195 aa17.4■□□□□ 0.38
CNOT9-208ENST00000542068 RAD51AP2Q09MP3 1159 aa17.4■□□□□ 0.38
CNOT9-208ENST00000542068 TBX2Q13207 712 aaPredicted RBP17.4■□□□□ 0.38
CNOT9-208ENST00000542068 ITPK1Q13572 414 aa17.4■□□□□ 0.38
CNOT9-208ENST00000542068 GPIHBP1Q8IV16 184 aa17.4■□□□□ 0.38
CNOT9-208ENST00000542068 C10orf67Q8IYJ2 551 aa17.4■□□□□ 0.38
CNOT9-208ENST00000542068 VGLL2Q8N8G2 317 aa17.4■□□□□ 0.38
CNOT9-208ENST00000542068 CCDC102AQ96A19 550 aa17.4■□□□□ 0.38
CNOT9-208ENST00000542068 V9GY48 417 aaPredicted RBP17.4■□□□□ 0.38
CNOT9-208ENST00000542068 RIC1Q4ADV7 1423 aa17.4■□□□□ 0.38
CNOT9-208ENST00000542068 A0A087X0B3 334 aa17.39■□□□□ 0.38
CNOT9-208ENST00000542068 ERFEQ4G0M1 354 aa17.39■□□□□ 0.38
CNOT9-208ENST00000542068 CAVIN4Q5BKX8 364 aa17.39■□□□□ 0.38
CNOT9-208ENST00000542068 JAKMIP3Q5VZ66 844 aa17.39■□□□□ 0.38
CNOT9-208ENST00000542068 KRT23Q9C075 422 aa17.39■□□□□ 0.38
CNOT9-208ENST00000542068 AATFQ9NY61 560 aaKnown RBP eCLIP17.39■□□□□ 0.38
CNOT9-208ENST00000542068 DACH1Q9UI36 760 aa17.39■□□□□ 0.38
CNOT9-208ENST00000542068 TFR2Q9UP52 801 aa17.39■□□□□ 0.38
CNOT9-208ENST00000542068 CTNND2Q9UQB3 1225 aa17.39■□□□□ 0.38
CNOT9-208ENST00000542068 ANKRD65E5RJM6 399 aa17.39■□□□□ 0.37
CNOT9-208ENST00000542068 PTPREP23469 700 aa17.39■□□□□ 0.37
CNOT9-208ENST00000542068 EARS2Q5JPH6 523 aaKnown RBP17.39■□□□□ 0.37
CNOT9-208ENST00000542068 SLC35F6Q8N357 371 aa17.39■□□□□ 0.37
CNOT9-208ENST00000542068 FUT8Q9BYC5 575 aa17.39■□□□□ 0.37
CNOT9-208ENST00000542068 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.39■□□□□ 0.37
CNOT9-208ENST00000542068 FMNL1O95466 1100 aaPredicted RBP17.39■□□□□ 0.37
CNOT9-208ENST00000542068 TXLNAP40222 546 aa17.39■□□□□ 0.37
CNOT9-208ENST00000542068 EVX2Q03828 476 aa17.39■□□□□ 0.37
CNOT9-208ENST00000542068 ZSCAN26Q16670 478 aa17.39■□□□□ 0.37
CNOT9-208ENST00000542068 ADGRA1Q86SQ6 560 aa17.39■□□□□ 0.37
CNOT9-208ENST00000542068 ENOX1Q8TC92 643 aaKnown RBP17.39■□□□□ 0.37
CNOT9-208ENST00000542068 PNKPQ96T60 521 aa17.39■□□□□ 0.37
CNOT9-208ENST00000542068 GNL3LQ9NVN8 582 aaKnown RBP17.39■□□□□ 0.37
CNOT9-208ENST00000542068 ADAMTSL3P82987 1691 aa17.39■□□□□ 0.37
CNOT9-208ENST00000542068 PPARAQ07869 468 aa17.38■□□□□ 0.37
CNOT9-208ENST00000542068 MORC3Q14149 939 aa17.38■□□□□ 0.37
CNOT9-208ENST00000542068 SLF1Q9BQI6 1058 aa17.38■□□□□ 0.37
CNOT9-208ENST00000542068 ADAM21Q9UKJ8 722 aa17.38■□□□□ 0.37
CNOT9-208ENST00000542068 CDHR2Q9BYE9 1310 aa17.38■□□□□ 0.37
CNOT9-208ENST00000542068 ALS2Q96Q42 1657 aa17.38■□□□□ 0.37
CNOT9-208ENST00000542068 GOLGA6L9A6NEM1 432 aa17.38■□□□□ 0.37
CNOT9-208ENST00000542068 TRIM66O15016 1216 aa17.38■□□□□ 0.37
CNOT9-208ENST00000542068 NMT2O60551 498 aa17.38■□□□□ 0.37
CNOT9-208ENST00000542068 ZNF18P17022 549 aa17.38■□□□□ 0.37
CNOT9-208ENST00000542068 ZNF654Q8IZM8 581 aa17.38■□□□□ 0.37
CNOT9-208ENST00000542068 RABGGTAQ92696 567 aa17.38■□□□□ 0.37
CNOT9-208ENST00000542068 NUP88Q99567 741 aaPredicted RBP17.38■□□□□ 0.37
CNOT9-208ENST00000542068 PLEKHA4Q9H4M7 779 aa17.38■□□□□ 0.37
CNOT9-208ENST00000542068 TAB2Q9NYJ8 693 aa17.38■□□□□ 0.37
CNOT9-208ENST00000542068 ADGRG1Q9Y653 693 aa17.38■□□□□ 0.37
CNOT9-208ENST00000542068 TNKSO95271 1327 aa17.38■□□□□ 0.37
CNOT9-208ENST00000542068 WNT7AO00755 349 aa17.38■□□□□ 0.37
CNOT9-208ENST00000542068 IFIT1BQ5T764 474 aaKnown RBP17.38■□□□□ 0.37
CNOT9-208ENST00000542068 C3orf67Q6ZVT6 689 aa17.38■□□□□ 0.37
CNOT9-208ENST00000542068 FCHSD1Q86WN1 690 aa17.38■□□□□ 0.37
CNOT9-208ENST00000542068 ZNF34Q8IZ26 560 aa17.38■□□□□ 0.37
CNOT9-208ENST00000542068 RGS22Q8NE09 1264 aa17.38■□□□□ 0.37
CNOT9-208ENST00000542068 SYNRGQ9UMZ2 1314 aa17.38■□□□□ 0.37
CNOT9-208ENST00000542068 N4BP3O15049 544 aa17.37■□□□□ 0.37
CNOT9-208ENST00000542068 FXR1P51114 621 aaKnown RBP eCLIP17.37■□□□□ 0.37
CNOT9-208ENST00000542068 PLCD1P51178 756 aa17.37■□□□□ 0.37
CNOT9-208ENST00000542068 NR1I3Q14994 352 aa17.37■□□□□ 0.37
CNOT9-208ENST00000542068 RSRC2Q7L4I2 434 aaKnown RBP17.37■□□□□ 0.37
CNOT9-208ENST00000542068 PLCD3Q8N3E9 789 aa17.37■□□□□ 0.37
CNOT9-208ENST00000542068 SYMPKQ92797 1274 aaKnown RBP17.37■□□□□ 0.37
CNOT9-208ENST00000542068 SIPA1L3O60292 1781 aaPredicted RBP17.37■□□□□ 0.37
CNOT9-208ENST00000542068 DCCP43146 1447 aa17.37■□□□□ 0.37
CNOT9-208ENST00000542068 USP17L12C9JPN9 530 aa17.37■□□□□ 0.37
CNOT9-208ENST00000542068 USP17L21D6R901 530 aa17.37■□□□□ 0.37
CNOT9-208ENST00000542068 RILPL1Q5EBL4 403 aa17.37■□□□□ 0.37
CNOT9-208ENST00000542068 CNNM2Q9H8M5 875 aa17.37■□□□□ 0.37
CNOT9-208ENST00000542068 ABCB6Q9NP58 842 aa17.37■□□□□ 0.37
CNOT9-208ENST00000542068 TRIM10Q9UDY6 481 aa17.37■□□□□ 0.37
CNOT9-208ENST00000542068 LCMT1Q9UIC8 334 aa17.37■□□□□ 0.37
CNOT9-208ENST00000542068 PHRF1Q9P1Y6 1649 aaKnown RBP17.37■□□□□ 0.37
CNOT9-208ENST00000542068 ENC1O14682 589 aa17.36■□□□□ 0.37
CNOT9-208ENST00000542068 ACTN4O43707 911 aaKnown RBP17.36■□□□□ 0.37
CNOT9-208ENST00000542068 EIF5P55010 431 aaKnown RBP17.36■□□□□ 0.37
CNOT9-208ENST00000542068 TXLNBQ8N3L3 684 aa17.36■□□□□ 0.37
CNOT9-208ENST00000542068 FANCBQ8NB91 859 aa17.36■□□□□ 0.37
CNOT9-208ENST00000542068 WASF1Q92558 559 aa17.36■□□□□ 0.37
CNOT9-208ENST00000542068 SRP68Q9UHB9 627 aaKnown RBP17.36■□□□□ 0.37
CNOT9-208ENST00000542068 TRIM75PA6NK02 468 aa17.36■□□□□ 0.37
CNOT9-208ENST00000542068 IFNAR1P17181 557 aa17.36■□□□□ 0.37
CNOT9-208ENST00000542068 KLRK1P26718 216 aa17.36■□□□□ 0.37
CNOT9-208ENST00000542068 ARID4AP29374 1257 aaPredicted RBP17.36■□□□□ 0.37
CNOT9-208ENST00000542068 TNNT3P45378 269 aaPredicted RBP17.36■□□□□ 0.37
CNOT9-208ENST00000542068 FILIP1LQ4L180 1135 aa17.36■□□□□ 0.37
CNOT9-208ENST00000542068 NCAPH2Q6IBW4 605 aa17.36■□□□□ 0.37
CNOT9-208ENST00000542068 INTS5Q6P9B9 1019 aaKnown RBP17.36■□□□□ 0.37
CNOT9-208ENST00000542068 ESR2Q92731 530 aa17.36■□□□□ 0.37
CNOT9-208ENST00000542068 CELF1Q92879 486 aaKnown RBP17.36■□□□□ 0.37
CNOT9-208ENST00000542068 PLIN2Q99541 437 aa17.36■□□□□ 0.37
CNOT9-208ENST00000542068 GUCA1BQ9UMX6 200 aa17.36■□□□□ 0.37
CNOT9-208ENST00000542068 KCPQ6ZWJ8 1503 aa17.36■□□□□ 0.37
CNOT9-208ENST00000542068 ZNF142P52746 1687 aaPredicted RBP17.36■□□□□ 0.37
CNOT9-208ENST00000542068 TCRBV5S4A2TA0A5A2 114 aa17.36■□□□□ 0.37
CNOT9-208ENST00000542068 RRAGBQ5VZM2 374 aa17.36■□□□□ 0.37
CNOT9-208ENST00000542068 SRGAP1Q7Z6B7 1085 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms