RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 ARHGEF25Q86VW2 580 aa7.31□□□□□ -1.24
CPSF7-220ENST00000541963 NME9Q86XW9 330 aa7.31□□□□□ -1.24
CPSF7-220ENST00000541963 TCP11L2Q8N4U5 519 aa7.31□□□□□ -1.24
CPSF7-220ENST00000541963 ZNF417Q8TAU3 575 aa7.31□□□□□ -1.24
CPSF7-220ENST00000541963 SREK1Q8WXA9 508 aaKnown RBP7.31□□□□□ -1.24
CPSF7-220ENST00000541963 DRC1Q96MC2 740 aa7.31□□□□□ -1.24
CPSF7-220ENST00000541963 ZNF587Q96SQ5 575 aaPredicted RBP7.31□□□□□ -1.24
CPSF7-220ENST00000541963 POLR3GLQ9BT43 218 aa7.31□□□□□ -1.24
CPSF7-220ENST00000541963 SPON2Q9BUD6 331 aa7.31□□□□□ -1.24
CPSF7-220ENST00000541963 SRA1Q9HD15 236 aaKnown RBP7.31□□□□□ -1.24
CPSF7-220ENST00000541963 COPRSQ9NQ92 184 aa7.31□□□□□ -1.24
CPSF7-220ENST00000541963 STARD13Q9Y3M8 1113 aa7.31□□□□□ -1.24
CPSF7-220ENST00000541963 CRYBG1Q9Y4K1 1723 aa7.31□□□□□ -1.24
CPSF7-220ENST00000541963 A0A1W2PP64 1363 aa7.31□□□□□ -1.24
CPSF7-220ENST00000541963 ANKRD36BQ8N2N9 1353 aa7.31□□□□□ -1.24
CPSF7-220ENST00000541963 WFS1O76024 890 aa7.3□□□□□ -1.24
CPSF7-220ENST00000541963 ALBP02768 609 aa7.3□□□□□ -1.24
CPSF7-220ENST00000541963 SLURP2P0DP57 97 aa7.3□□□□□ -1.24
CPSF7-220ENST00000541963 HSPA5P11021 654 aaKnown RBP7.3□□□□□ -1.24
CPSF7-220ENST00000541963 ESRRAP11474 423 aaPredicted RBP7.3□□□□□ -1.24
CPSF7-220ENST00000541963 NME2P22392 152 aa7.3□□□□□ -1.24
CPSF7-220ENST00000541963 RPS26P62854 115 aaKnown RBP7.3□□□□□ -1.24
CPSF7-220ENST00000541963 RACK1P63244 317 aaKnown RBP7.3□□□□□ -1.24
CPSF7-220ENST00000541963 KRT76Q01546 638 aa7.3□□□□□ -1.24
CPSF7-220ENST00000541963 FAAP100Q0VG06 881 aa7.3□□□□□ -1.24
CPSF7-220ENST00000541963 C20orf204Q6ZNR8 217 aa7.3□□□□□ -1.24
CPSF7-220ENST00000541963 TOM1L2Q6ZVM7 507 aa7.3□□□□□ -1.24
CPSF7-220ENST00000541963 KIAA0825Q8IV33 1275 aa7.3□□□□□ -1.24
CPSF7-220ENST00000541963 SLC43A3Q8NBI5 491 aa7.3□□□□□ -1.24
CPSF7-220ENST00000541963 SLC7A3Q8WY07 619 aa7.3□□□□□ -1.24
CPSF7-220ENST00000541963 WNT8BQ93098 351 aa7.3□□□□□ -1.24
CPSF7-220ENST00000541963 CBX8Q9HC52 389 aa7.3□□□□□ -1.24
CPSF7-220ENST00000541963 PPP1R1BQ9UD71 204 aaPredicted RBP7.3□□□□□ -1.24
CPSF7-220ENST00000541963 SLIT3O75094 1523 aa7.3□□□□□ -1.24
CPSF7-220ENST00000541963 CD163L1Q9NR16 1453 aa7.3□□□□□ -1.24
CPSF7-220ENST00000541963 MON2Q7Z3U7 1717 aa7.3□□□□□ -1.24
CPSF7-220ENST00000541963 GLI3P10071 1580 aa7.29□□□□□ -1.24
CPSF7-220ENST00000541963 NRKQ7Z2Y5 1582 aa7.29□□□□□ -1.24
CPSF7-220ENST00000541963 PIK3C2AO00443 1686 aa7.29□□□□□ -1.24
CPSF7-220ENST00000541963 LINC01387J3KSC0 135 aa7.29□□□□□ -1.24
CPSF7-220ENST00000541963 ENC1O14682 589 aa7.29□□□□□ -1.24
CPSF7-220ENST00000541963 EIF4A3P38919 411 aaKnown RBP7.29□□□□□ -1.24
CPSF7-220ENST00000541963 AFF1P51825 1210 aaKnown RBP7.29□□□□□ -1.24
CPSF7-220ENST00000541963 GSTM4Q03013 218 aa7.29□□□□□ -1.24
CPSF7-220ENST00000541963 C19orf57Q0VDD7 668 aa7.29□□□□□ -1.24
CPSF7-220ENST00000541963 AP3B2Q13367 1082 aa7.29□□□□□ -1.24
CPSF7-220ENST00000541963 ZNF423Q2M1K9 1284 aa7.29□□□□□ -1.24
CPSF7-220ENST00000541963 SNAP47Q5SQN1 464 aa7.29□□□□□ -1.24
CPSF7-220ENST00000541963 PCNX4Q63HM2 1172 aa7.29□□□□□ -1.24
CPSF7-220ENST00000541963 NEDD1Q8NHV4 660 aa7.29□□□□□ -1.24
CPSF7-220ENST00000541963 SPATA32Q96LK8 384 aa7.29□□□□□ -1.24
CPSF7-220ENST00000541963 TRIM56Q9BRZ2 755 aaKnown RBP7.29□□□□□ -1.24
CPSF7-220ENST00000541963 RRAGCQ9HB90 399 aa7.29□□□□□ -1.24
CPSF7-220ENST00000541963 CYP8B1Q9UNU6 501 aa7.29□□□□□ -1.24
CPSF7-220ENST00000541963 NRAPQ86VF7 1730 aa7.29□□□□□ -1.24
CPSF7-220ENST00000541963 CAMTA1Q9Y6Y1 1673 aa7.28□□□□□ -1.24
CPSF7-220ENST00000541963 F6X3S4 739 aa7.28□□□□□ -1.24
CPSF7-220ENST00000541963 SOX1O00570 391 aaPredicted RBP7.28□□□□□ -1.24
CPSF7-220ENST00000541963 CYP11A1P05108 521 aa7.28□□□□□ -1.24
CPSF7-220ENST00000541963 EPHA1P21709 976 aa7.28□□□□□ -1.24
CPSF7-220ENST00000541963 ARNTP27540 789 aa7.28□□□□□ -1.24
CPSF7-220ENST00000541963 GMPRP36959 345 aa7.28□□□□□ -1.24
CPSF7-220ENST00000541963 AMPHP49418 695 aa7.28□□□□□ -1.24
CPSF7-220ENST00000541963 ARID5AQ03989 594 aa7.28□□□□□ -1.24
CPSF7-220ENST00000541963 MSL1Q68DK7 614 aa7.28□□□□□ -1.24
CPSF7-220ENST00000541963 AGMOQ6ZNB7 445 aa7.28□□□□□ -1.24
CPSF7-220ENST00000541963 FAM196AQ6ZSG2 479 aa7.28□□□□□ -1.24
CPSF7-220ENST00000541963 MAP4K3Q8IVH8 894 aa7.28□□□□□ -1.24
CPSF7-220ENST00000541963 SULF2Q8IWU5 870 aa7.28□□□□□ -1.24
CPSF7-220ENST00000541963 PHC3Q8NDX5 983 aa7.28□□□□□ -1.24
CPSF7-220ENST00000541963 CARD10Q9BWT7 1032 aa7.28□□□□□ -1.24
CPSF7-220ENST00000541963 TANGO6Q9C0B7 1094 aa7.28□□□□□ -1.24
CPSF7-220ENST00000541963 MIR1-1HGQ9H1L0 117 aa7.28□□□□□ -1.24
CPSF7-220ENST00000541963 SOX17Q9H6I2 414 aaPredicted RBP7.28□□□□□ -1.24
CPSF7-220ENST00000541963 OSGEPQ9NPF4 335 aa7.28□□□□□ -1.24
CPSF7-220ENST00000541963 SUPT16HQ9Y5B9 1047 aaKnown RBP7.28□□□□□ -1.24
CPSF7-220ENST00000541963 WDR17Q8IZU2 1322 aa7.27□□□□□ -1.24
CPSF7-220ENST00000541963 CRB1P82279 1406 aa7.27□□□□□ -1.24
CPSF7-220ENST00000541963 PIK3R2O00459 728 aa7.27□□□□□ -1.25
CPSF7-220ENST00000541963 FYB1O15117 783 aa7.27□□□□□ -1.25
CPSF7-220ENST00000541963 CELA2BP08218 269 aaPredicted RBP7.27□□□□□ -1.25
CPSF7-220ENST00000541963 TNNI2P48788 182 aa7.27□□□□□ -1.25
CPSF7-220ENST00000541963 LMNB2Q03252 620 aa7.27□□□□□ -1.25
CPSF7-220ENST00000541963 PAK2Q13177 524 aa7.27□□□□□ -1.25
CPSF7-220ENST00000541963 CAMK2GQ13555 558 aaPredicted RBP7.27□□□□□ -1.25
CPSF7-220ENST00000541963 C1orf229Q6ZS94 237 aaPredicted RBP7.27□□□□□ -1.25
CPSF7-220ENST00000541963 ZNF296Q8WUU4 475 aaPredicted RBP7.27□□□□□ -1.25
CPSF7-220ENST00000541963 IP6K1Q92551 441 aa7.27□□□□□ -1.25
CPSF7-220ENST00000541963 GPRASP2Q96D09 838 aa7.27□□□□□ -1.25
CPSF7-220ENST00000541963 PRDM6Q9NQX0 595 aa7.27□□□□□ -1.25
CPSF7-220ENST00000541963 COL5A2P05997 1499 aaPredicted RBP7.27□□□□□ -1.25
CPSF7-220ENST00000541963 CGNL1Q0VF96 1302 aa7.27□□□□□ -1.25
CPSF7-220ENST00000541963 LMO7Q8WWI1 1683 aa7.26□□□□□ -1.25
CPSF7-220ENST00000541963 CCDC7Q96M83 1385 aa7.26□□□□□ -1.25
CPSF7-220ENST00000541963 EXOC5O00471 708 aa7.26□□□□□ -1.25
CPSF7-220ENST00000541963 FSCN2O14926 492 aa7.26□□□□□ -1.25
CPSF7-220ENST00000541963 PF4P02776 101 aa7.26□□□□□ -1.25
CPSF7-220ENST00000541963 ATP2B1P20020 1258 aa7.26□□□□□ -1.25
CPSF7-220ENST00000541963 DNAJA1P31689 397 aaKnown RBP7.26□□□□□ -1.25
CPSF7-220ENST00000541963 BAG6P46379 1132 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms