RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 EFHD1Q9BUP0 239 aa16.91■□□□□ 0.3
HMGA2-210ENST00000541363 ANO3Q9BYT9 981 aa16.91■□□□□ 0.3
HMGA2-210ENST00000541363 MRPL44Q9H9J2 332 aaKnown RBP16.91■□□□□ 0.3
HMGA2-210ENST00000541363 GINS2Q9Y248 185 aa16.91■□□□□ 0.3
HMGA2-210ENST00000541363 CD19P15391 556 aa16.91■□□□□ 0.3
HMGA2-210ENST00000541363 TRIM60Q495X7 471 aa16.91■□□□□ 0.3
HMGA2-210ENST00000541363 KRT82Q9NSB4 513 aa16.91■□□□□ 0.3
HMGA2-210ENST00000541363 SPDYE2BA6NHP3 402 aa16.91■□□□□ 0.3
HMGA2-210ENST00000541363 SPDYE6P0CI01 402 aa16.91■□□□□ 0.3
HMGA2-210ENST00000541363 LMNB2Q03252 620 aa16.91■□□□□ 0.3
HMGA2-210ENST00000541363 ZNF449Q6P9G9 518 aa16.91■□□□□ 0.3
HMGA2-210ENST00000541363 OLA1Q9NTK5 396 aaKnown RBP16.91■□□□□ 0.3
HMGA2-210ENST00000541363 ASPHQ12797 758 aa16.9■□□□□ 0.3
HMGA2-210ENST00000541363 NUDCD3Q8IVD9 361 aa16.9■□□□□ 0.3
HMGA2-210ENST00000541363 NBPF3Q9H094 633 aa16.9■□□□□ 0.3
HMGA2-210ENST00000541363 AZI2Q9H6S1 392 aa16.9■□□□□ 0.3
HMGA2-210ENST00000541363 BZW2Q9Y6E2 419 aaKnown RBP16.9■□□□□ 0.3
HMGA2-210ENST00000541363 PTPDC1A2A3K4 754 aa16.9■□□□□ 0.3
HMGA2-210ENST00000541363 LDHBP07195 334 aaKnown RBP16.9■□□□□ 0.3
HMGA2-210ENST00000541363 CLTAP09496 248 aa16.9■□□□□ 0.3
HMGA2-210ENST00000541363 RPGRIP1Q96KN7 1286 aa16.9■□□□□ 0.3
HMGA2-210ENST00000541363 CAPN9O14815 690 aa16.9■□□□□ 0.3
HMGA2-210ENST00000541363 THAP12O43422 761 aa16.9■□□□□ 0.3
HMGA2-210ENST00000541363 SAT1P21673 171 aa16.9■□□□□ 0.3
HMGA2-210ENST00000541363 KLHL30Q0D2K2 578 aa16.9■□□□□ 0.3
HMGA2-210ENST00000541363 IQCB1Q15051 598 aa16.9■□□□□ 0.3
HMGA2-210ENST00000541363 TCEANC2Q96MN5 208 aa16.9■□□□□ 0.3
HMGA2-210ENST00000541363 SUCLA2Q9P2R7 463 aaPredicted RBP16.9■□□□□ 0.3
HMGA2-210ENST00000541363 ITM2BQ9Y287 266 aa16.9■□□□□ 0.3
HMGA2-210ENST00000541363 MAN1A2O60476 641 aa16.9■□□□□ 0.3
HMGA2-210ENST00000541363 EEF1B2P24534 225 aaKnown RBP16.9■□□□□ 0.3
HMGA2-210ENST00000541363 ELF2Q15723 593 aa16.9■□□□□ 0.3
HMGA2-210ENST00000541363 HADHQ16836 314 aaKnown RBP16.9■□□□□ 0.3
HMGA2-210ENST00000541363 MYCT1Q8N699 235 aa16.9■□□□□ 0.3
HMGA2-210ENST00000541363 LRRC8CQ8TDW0 803 aa16.9■□□□□ 0.3
HMGA2-210ENST00000541363 JDP2Q8WYK2 163 aa16.9■□□□□ 0.3
HMGA2-210ENST00000541363 IRAK4Q9NWZ3 460 aa16.9■□□□□ 0.3
HMGA2-210ENST00000541363 ZC3H12CQ9C0D7 883 aaKnown RBP16.9■□□□□ 0.3
HMGA2-210ENST00000541363 C9orf84Q5VXU9 1444 aa16.9■□□□□ 0.3
HMGA2-210ENST00000541363 ARHGEF9O43307 516 aa16.9■□□□□ 0.3
HMGA2-210ENST00000541363 IL15P40933 162 aaPredicted RBP16.9■□□□□ 0.3
HMGA2-210ENST00000541363 STX1BP61266 288 aa16.9■□□□□ 0.3
HMGA2-210ENST00000541363 RINT1Q6NUQ1 792 aa16.9■□□□□ 0.3
HMGA2-210ENST00000541363 CHST3Q7LGC8 479 aa16.9■□□□□ 0.3
HMGA2-210ENST00000541363 MAD1L1Q9Y6D9 718 aa16.9■□□□□ 0.3
HMGA2-210ENST00000541363 NR1I2O75469 434 aa16.89■□□□□ 0.3
HMGA2-210ENST00000541363 ADCY8P40145 1251 aa16.89■□□□□ 0.3
HMGA2-210ENST00000541363 ARMC9Q7Z3E5 817 aa16.89■□□□□ 0.3
HMGA2-210ENST00000541363 A0A1B0GVL5 298 aa16.89■□□□□ 0.29
HMGA2-210ENST00000541363 RAPH1Q70E73 1250 aa16.89■□□□□ 0.29
HMGA2-210ENST00000541363 SYNJ2O15056 1496 aa16.89■□□□□ 0.29
HMGA2-210ENST00000541363 E9PMD0 336 aa16.89■□□□□ 0.29
HMGA2-210ENST00000541363 GNA14O95837 355 aa16.89■□□□□ 0.29
HMGA2-210ENST00000541363 CWF19L2Q2TBE0 894 aaKnown RBP16.89■□□□□ 0.29
HMGA2-210ENST00000541363 CDKL2Q92772 493 aa16.89■□□□□ 0.29
HMGA2-210ENST00000541363 FAM135AQ9P2D6 1515 aa16.89■□□□□ 0.29
HMGA2-210ENST00000541363 SERPINI2O75830 405 aa16.89■□□□□ 0.29
HMGA2-210ENST00000541363 LONP1P36776 959 aaKnown RBP16.89■□□□□ 0.29
HMGA2-210ENST00000541363 MAEAQ7L5Y9 396 aa16.89■□□□□ 0.29
HMGA2-210ENST00000541363 FAM186BQ8IYM0 893 aa16.89■□□□□ 0.29
HMGA2-210ENST00000541363 PARD3BQ8TEW8 1205 aa16.89■□□□□ 0.29
HMGA2-210ENST00000541363 IQCDQ96DY2 449 aa16.89■□□□□ 0.29
HMGA2-210ENST00000541363 PSMB7Q99436 277 aa16.89■□□□□ 0.29
HMGA2-210ENST00000541363 FGD4Q96M96 766 aa16.89■□□□□ 0.29
HMGA2-210ENST00000541363 IFT122Q9HBG6 1241 aa16.89■□□□□ 0.29
HMGA2-210ENST00000541363 EPRSP07814 1512 aaKnown RBP16.89■□□□□ 0.29
HMGA2-210ENST00000541363 ARHGDIAP52565 204 aa16.89■□□□□ 0.29
HMGA2-210ENST00000541363 NEUROG2Q9H2A3 272 aa16.89■□□□□ 0.29
HMGA2-210ENST00000541363 SLC13A4Q9UKG4 626 aa16.89■□□□□ 0.29
HMGA2-210ENST00000541363 DNM3Q9UQ16 869 aa16.89■□□□□ 0.29
HMGA2-210ENST00000541363 NMIQ13287 307 aaPredicted RBP16.88■□□□□ 0.29
HMGA2-210ENST00000541363 CCPG1Q9ULG6 757 aa16.88■□□□□ 0.29
HMGA2-210ENST00000541363 GAPVD1Q14C86 1478 aa16.88■□□□□ 0.29
HMGA2-210ENST00000541363 DCLK2Q8N568 766 aa16.88■□□□□ 0.29
HMGA2-210ENST00000541363 GPCPD1Q9NPB8 672 aa16.88■□□□□ 0.29
HMGA2-210ENST00000541363 TMTC3Q6ZXV5 915 aa16.88■□□□□ 0.29
HMGA2-210ENST00000541363 KCNG1Q9UIX4 513 aa16.88■□□□□ 0.29
HMGA2-210ENST00000541363 IVNS1ABPQ9Y6Y0 642 aa16.88■□□□□ 0.29
HMGA2-210ENST00000541363 RNF113AO15541 343 aaKnown RBP16.88■□□□□ 0.29
HMGA2-210ENST00000541363 NCAPH2Q6IBW4 605 aa16.88■□□□□ 0.29
HMGA2-210ENST00000541363 PPP4R4Q6NUP7 873 aa16.88■□□□□ 0.29
HMGA2-210ENST00000541363 POLR2DO15514 142 aaKnown RBP16.88■□□□□ 0.29
HMGA2-210ENST00000541363 GPC4O75487 556 aa16.88■□□□□ 0.29
HMGA2-210ENST00000541363 GUCY2FP51841 1108 aa16.88■□□□□ 0.29
HMGA2-210ENST00000541363 NPHP3Q7Z494 1330 aa16.88■□□□□ 0.29
HMGA2-210ENST00000541363 ZBBXA8MT70 800 aa16.88■□□□□ 0.29
HMGA2-210ENST00000541363 MAGEA1P43355 309 aa16.88■□□□□ 0.29
HMGA2-210ENST00000541363 GNGT1P63211 74 aa16.88■□□□□ 0.29
HMGA2-210ENST00000541363 IWS1Q96ST2 819 aa16.88■□□□□ 0.29
HMGA2-210ENST00000541363 ABL1P00519 1130 aa16.87■□□□□ 0.29
HMGA2-210ENST00000541363 ZSCAN26Q16670 478 aa16.87■□□□□ 0.29
HMGA2-210ENST00000541363 C20orf194Q5TEA3 1177 aa16.87■□□□□ 0.29
HMGA2-210ENST00000541363 PRPF38AQ8NAV1 312 aaKnown RBP16.87■□□□□ 0.29
HMGA2-210ENST00000541363 JARID2Q92833 1246 aaPredicted RBP16.87■□□□□ 0.29
HMGA2-210ENST00000541363 MYCLP12524 364 aaPredicted RBP16.87■□□□□ 0.29
HMGA2-210ENST00000541363 SFMBT1Q9UHJ3 866 aa16.87■□□□□ 0.29
HMGA2-210ENST00000541363 LRRC23Q53EV4 343 aaPredicted RBP16.87■□□□□ 0.29
HMGA2-210ENST00000541363 PDXDC1Q6P996 788 aa16.87■□□□□ 0.29
HMGA2-210ENST00000541363 SPDYE1Q8NFV5 336 aaPredicted RBP16.87■□□□□ 0.29
HMGA2-210ENST00000541363 MROH2BQ7Z745 1585 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms